Selaginella moellendorffii: SELMODRAFT_427515
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Entry
SELMODRAFT_427515 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_427515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_427515
Enzymes [BR:
smo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
SELMODRAFT_427515
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SELMODRAFT_427515
mRNA degradation factors
5'-3' decay
Decapping complex
SELMODRAFT_427515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
9661239
NCBI-ProteinID:
XP_002988882
JGI:
427515
UniProt:
D8SZV0
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MAAGGGNGKAQGGHSSRLPSQEMLDDLCSRFVLNAPEEELESFERILFLLEQAHWFYEDN
TMEQNASLKSLTLREFTALMFQKCVALRPYIAHFDDIYKNFTSYKTSVPVTGAIILDESY
ERCLMVKGWKPGASWTFPRGKKNKDEEDHNCAIREVWEETGFDVSELIRTDDHLEVVIGQ
QRMRLFIVGGVPEETLFIPQTKKEISEIAWHRIEDLPKHSNESSHNRGPTGLKYYMVWPF
LRPLQAWIVKNRPLITLKSDNGSKGVTVWKANTSGHTTFSTPIMVSHSVTVVAVKETTST
SFVDLPGKSFRNFRFDVPQIVSHIV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgggaggaggaaatgggaaggcgcagggcgggcattcctcgcgtctcccttcg
caggagatgctcgatgatctttgcagccggttcgtgctcaatgcgcccgaggaggaactg
gaatctttcgagcggatcctcttcttactggagcaagctcactggttctacgaggacaac
accatggagcagaatgcttccttgaaatcgctaacattgcgagagttcactgctctcatg
ttccaaaaatgtgtcgcgcttcgtccatacatcgcacacttcgatgatatctacaagaac
tttacaagctacaagacgagtgtgcctgttactggtgcgatcatcttggacgagtcttat
gaaagatgtctcatggtcaagggatggaaaccgggagctagctggacttttcccagaggc
aagaagaacaaggacgaggaggatcacaactgtgctatcagagaggtctgggaggaaact
ggattcgacgtctcagagctcatcagaactgacgatcacctggaagttgtcatcgggcag
caacggatgagactcttcatcgtcggtggcgttccagaagaaacgctcttcattcctcag
acaaagaaagagattagtgagatagcttggcatcggatagaggacttacccaagcacagt
aatgaatcgtcacacaacaggggaccaacggggctcaagtactatatggtgtggccattt
ctcaggccccttcaggcatggattgtcaagaacaggccattgataacactgaagagcgac
aatggaagcaaaggagtgacagtgtggaaagcaaatacgagcgggcacacaacattctcg
acacccattatggtgagccacagcgtcacggttgtggcagtgaaggagacaacgagcacc
agcttcgtagatctcccaggcaagagcttccggaactttcgattcgacgtgccgcagatt
gtgtctcatatagtctag
DBGET
integrated database retrieval system
