Selaginella moellendorffii: SELMODRAFT_428596
Help
Entry
SELMODRAFT_428596 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03257
translation initiation factor 4A
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_428596
03012 Translation factors [BR:
smo03012
]
SELMODRAFT_428596
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_428596
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
SELMODRAFT_428596
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_428596
Translation factors [BR:
smo03012
]
Eukaryotic type
Initiation factors
eIF-4
SELMODRAFT_428596
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SELMODRAFT_428596
Exosomal proteins of bladder cancer cells
SELMODRAFT_428596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
CoA_binding_2
Motif
Other DBs
NCBI-GeneID:
9647269
NCBI-ProteinID:
XP_002990119
JGI:
428596
UniProt:
D8T3D2
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAAVVDHLLGTLLRPRGEDDHFVRPLDRLEELVEAGPLHAGAWINSSFCPKPALGFGAMA
SSCDFEEALAAAASGINAHSSCRFAGMHVTLVVTSAAKIPLLLQLLRSRAISNCWGLVGR
MSEDEWTLRALSFVVATPEEVRGTALFSSRLEALVLDKAAVAQNTFFHELLYESQRRKLP
VFPAQPRVPVFRRPWQRGVSAMKGWVDPRDRSSVKGELRSSLEETLPEVLSCSGLGDSWF
DSAVESFADGDSIVQQDWSAILSYMPGVFRRLARGDEWLTLVLAPDCRAAPIAQFMQVFA
RHFGLPEELVGLQAASRVAIGSPERFHASNRLSDVCQLILVEADKLFASHRPEMEWIVER
LEEDVQIGLHSETLSPEVEDLASRFAEGHRWERLAKAGASMDGVRQFYARVDDESCKLDE
LCRLCKELRRRFKVQAAVVCNSSARVVEVAEEMRKRGLSAFGIHSGMGEREVELIKRSEQ
RSVIVTDHGCSKGARDVINFEMPLSPGDYFQRASKLRDQVTKVVISLVVGGQEFLKKGPV
FCVQSEVGTGKSCNTRTQELVHEFANLVSTISLSCGLSSAKTQAVDNSFNIDQFKLFINI
PNFP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggtcgtcgatcatcttctcggcacactcctgcgtccccgcggtgaagatgac
cacttcgtacgcccccttgaccgcctcgaggaattggtcgaggccgggccgcttcacgcc
ggggcctggataaactcttccttttgccctaaaccggcccttgggtttggtgccatggca
tcaagctgcgattttgaggaagctctagctgcggctgccagtggcatcaacgctcacagt
tcgtgccgctttgcaggcatgcatgtgacccttgtggtcacgagcgcggccaaaatccca
ttgttgttgcaactcctgcgctcccgagcaatctctaattgttgggggctggtagggcgc
atgagcgaggacgaatggacgctgcgagccttgagctttgtggtggccaccccggaggaa
gtccgtggcaccgctttgttttcctcccgccttgaggcgcttgtgctggacaaagcagct
gtggcgcaaaacacttttttccacgagctcttgtatgaatcacaacgtcgtaagcttccc
gtgtttcctgcgcaaccacgagtaccagtctttcggaggccgtggcagcgcggcgtgagc
gcaatgaagggctgggtggatcccagggaccgctccagtgtcaagggggagctgcgttcc
tccttggaggaaactctaccagaagtgctgtcttgctctggccttggagactcgtggttt
gactcagctgtggaaagctttgccgatggtgacagcatagtgcagcaggactggtccgcg
attctgagctacatgcctggcgtcttccgtcgccttgctcgcggagatgaatggctcacg
cttgtcctggcacccgactgcagggctgctcccatcgcccagtttatgcaagtgtttgct
cgtcacttcggactgccagaagagctggttggcctccaagcggccagccgagttgccatt
ggttcccccgagagatttcacgcaagcaacaggttgagcgacgtctgccagctcatactg
gtcgaggcggacaagctctttgcgtcacacaggcccgagatggagtggatcgtggagcgg
ctggaagaggatgtccagatcggtttgcactcggagacgctgtctcctgaggtggaagac
ctggcgtcgaggtttgccgagggccatcggtgggaaaggctagccaaggccggcgccagc
atggatggcgtccgccagttctacgctcgcgtggacgatgagagctgcaaactagacgag
ctatgccggctgtgcaaagagctgaggcggcgcttcaaagtccaggcggcggtggtgtgc
aacagcagtgccagggtggtggaggtggcggaggagatgaggaagcggggcttgtccgcg
tttgggattcacagcggcatgggcgagagggaggtggagcttatcaagcggagcgagcaa
aggtccgtgatcgtcacagatcatggctgctccaagggagctcgagacgtgatcaacttt
gagatgccactgtctcccggggactactttcagcgtgcttccaagctccgggaccaggtg
accaaagtggtgattagtcttgttgtgggggggcaagagtttttgaagaagggtccagtg
ttttgtgtgcaatctgaggttggcaccggcaaatcttgcaacactagaactcaggaatta
gtccatgaatttgcaaacctggtgtctacaatcagtctttcatgtggcttgagctccgca
aagactcaagctgtagacaattctttcaacatcgaccagtttaagctcttcattaacatc
ccaaattttccttaa
DBGET
integrated database retrieval system
