Selaginella moellendorffii: SELMODRAFT_429809
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Entry
SELMODRAFT_429809 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_429809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_429809
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
SELMODRAFT_429809
INO80 complex (yeast)
SELMODRAFT_429809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
DEAD
HDA2-3
PSY3
Motif
Other DBs
NCBI-GeneID:
9639633
NCBI-ProteinID:
XP_002991519
JGI:
429809
UniProt:
D8T7D3
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MTMPASSQNGTEEWELKGCSYSVDDLFNLEPLLNFHIPEELDDFASLEEQEDEGSSRLRL
EEERAEIPLSSQAEMTLKRKRVQVEAEAGSAALCRDDADSNDDNCVQISEEHYRGLLGEH
LQKYRRTCLKEAIAARLTSNAVGRCLDTAGVVAVAGSSQADSSVLQDERLLDLGEGLKFL
VPPFYEQLAQSIELPSMASIQVEESVLSGPVTSKSVAAIIASDRRLGKEPVPLVVVKHKT
GTSRTKFPLRVLDAEKATRLINGYEMPVTKQGTEKQLPVNDIKVLDRGDGYEVIQRRIQR
KPATTKNATEIAHEDVEKVAKFWVSLVKRDLPKHFKAFTTYHKKQMAECKRLTDACQKEV
KLRNTKIMRAMKNAPIRNRKLARDMINFWRKLDKEQAEVRRREEKDAAEALKRDEEFREA
RRQQQRLNFLLTQTELYSHFMQNKLTGQKASLELETDPAGSKGPVDAAEEAALREEALRA
AEKAAFEQKEKTNMFDNECSKLREVGPGEEARGHGENIDLLHPSTMPTTSSVDQPSLFHG
NLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPS
TVLNNWADEIKRFCPELKILPYWGGLQERTVLRKNINPKRLYRRDSSFHILITSYQLLVS
DEKYFKRVKWQYLVLDEAQAIKSASSLRWKILLSFSCRNRLLLTGTPIQNNMAELWALLH
FIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELT
KKKEVVVPCLLSSRQQAIYQAVKNKISIADLFDGGHLNEKKVVNLMNIVIQLRKVCNHPE
LFERNEGRTYFHFAASVNHLLPAAFGDLEDLYCFGNHNPIAFKIPKLIYRDGITSLRSSA
QGFQEKWLFNLMNVFSAENVHKSAVSFGQSSSGSFGFTRLMNTSSSEVSFLSNATILERC
QYGVLQSRTALPDDDDDSDPRVTAIKRLLLVRTPSESGLLRRKRAVGLTLEPFEALAVPL
EERLTGNTQLLRSVKAFIPPVLAPQIEELCSDRSFAYQRAEELHNPYIKRLLVGFGRTSE
FNGPSMPLDPHPLIQEIDKEVHGQNCLLTSSFQIFGSAPPLQTIDFARTLMDSGKLQALD
ILFRRLRAEEHRVLVFAQMTKMLNILEDYMKYRKYKYLRLDGSSTIMDRRDMVKDFQHRS
DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTMDLQAMDRAHRLGQTKEVTVYRLICK
GTVEEKIVKRANQKNTVQQLVMTGGQSQDVFEADEVVSLLLDDAELEQRLKHQKSLEQTD
KPRGKKNEVSRKVVQIDADEVVSLQDDLAAGAGDSEKLPEKATPSRRKSGQKRQAGDEMK
PPKPSKVAKETPTSDAAKEAKPRSKAKPKKASQDVEKKVAATSATR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccggcatcctcgcagaacgggacggaggagtgggaattgaaagggtgtagc
tattccgtcgatgacttatttaatttggagccattgctaaactttcacattcccgaggag
ctggatgactttgcgagcttggaggagcaagaagatgaaggaagctccaggcttcggttg
gaagaggaaagagctgaaattccactgagctcccaagcagagatgacgctgaaaagaaaa
agagtccaagtggaagccgaggctggcagtgcggctttatgccgcgacgatgccgatagc
aacgatgacaattgcgtccagatatccgaggagcattacaggggtctgcttggagagcat
ctgcaaaagtataggcggacttgtttgaaggaagccatcgcagctcgactaacatcaaat
gctgtgggaaggtgtctggacacggccggggtggtggcagtcgcgggatcttcacaagcc
gattcgtcggttttacaggatgaacgacttctcgacttgggagaggggttgaagtttttg
gttccgccattttacgagcagctggctcaaagcattgagctgccgagcatggcgtctatc
caggttgaggaatccgttcttagcggacctgtgacgtccaaaagcgtcgcggccatcatc
gcctctgatcgacgactggggaaggaaccggttcctttggtggtggtaaagcacaagact
ggcacatcaaggacgaaatttcctctacgtgtactggatgcggagaaggccacaaggttg
atcaatgggtatgagatgccagtcacgaagcaggggacagaaaagcaattaccggtgaac
gacataaaagttcttgacaggggcgatggctatgaggtcattcaacgaaggatacaaagg
aagccagcgacgacgaagaatgccacagagattgcgcacgaggatgttgagaaggttgcg
aagttctgggtcagccttgtgaaaagggacttgcctaagcatttcaaggccttcacaact
tatcacaagaagcaaatggctgagtgtaaacgcttgacggatgcctgtcaaaaagaggtt
aagcttcgaaacacgaaaatcatgagggcaatgaaaaatgcgccaattcggaacagaaag
cttgcgcgtgacatgattaatttctggaggaaactggacaaggaacaagccgaagtcaga
agaagagaagagaaggatgctgctgaagctctaaagcgagacgaggagtttcgagaagct
agaagacagcagcaacgtcttaactttctgctcactcaaacagaactctatagccatttc
atgcagaacaagctgacggggcagaaggcgtctctagagcttgaaactgatccggctgga
tcaaaaggtccagtcgatgcagcagaggaagcggctctgagagaagaggctttaagagct
gccgagaaagctgcttttgaacagaaagagaagacaaatatgttcgacaacgaatgctca
aagctacgggaagttggacctggggaggaagcccgaggacatggcgaaaacatcgattta
ttgcatccatctactatgcctacaacatcatccgtcgatcaaccgtcactctttcacgga
aacttgaaagaataccagctaaaaggcctgcagtggcttgtcaactgctacgagcagggt
ttaaatggaattttggcggatgagatgggattgggaaagacgatccaagcaatggctttc
ttagcgcatctagcggaagaaaagaacatatggggtccgttcctagttgttgcaccgtca
actgttctcaacaattgggccgatgaaatcaaacgtttctgcccggagttgaagatcctt
ccttactggggtgggttgcaagagcggacagtgttgaggaagaacatcaacccgaagagg
ctataccgaagggattcgagctttcacattctaataacgagttatcaactgctggtgtcg
gatgagaagtattttaagcgtgtgaagtggcagtatttagttcttgacgaagcgcaagcg
atcaaaagtgctagcagtttgcggtggaaaattctgttgagttttagttgcagaaatcgt
ttactattaactggaacgccaatccaaaataacatggcagaattgtgggcgctacttcat
tttattatgccaacgctttttgatagtcacgaacagtttaatgaatggttttccaaaggg
atagagaaccatgcagagcatggaggtactttaaatgaacatcagctaaatagattgcat
gcgattctaaaaccgtttatgttaaggcgtgtgaaaaaggatgttgtctccgagctgaca
aaaaagaaggaagttgttgtgccttgcctacttagctctcgtcagcaagctatatatcaa
gctgtgaagaacaaaatctctatagctgatctttttgacggaggccatctaaacgagaag
aaggtcgtaaatcttatgaatatagtaattcaactacgcaaggtctgcaaccatcccgag
ctttttgaacgaaatgaaggacgcacgtactttcactttgcagcaagtgttaaccatctc
ttgccggcagcctttggggatttagaggatttgtattgttttggaaatcacaatccaata
gcttttaagatacccaagcttatttatcgagatggtatcacgagtttgcgtagttctgcc
caaggcttccaagaaaaatggttgtttaatttgatgaacgttttttctgcggaaaatgtt
cacaaatcagctgtatcttttgggcagtcttcaagtggttcatttggctttacaaggctg
atgaacacgtcatcttctgaagtatcatttttgagcaacgcaactatcttggaacgatgt
cagtatggggtactgcaatcgcggacggctctgccagatgatgacgacgattcagatcca
agagtaacagccatcaagaggctacttctggtacgcactcccagtgagtctggcctttta
cggcggaaaagagctgtcggtcttactctggagcctttcgaagctttagctgttcccttg
gaggaacgattaactggcaacacacagcttcttcgctctgtgaaagcgtttattccacca
gtgcttgctcctcagattgaagagttgtgttcggatcgttcatttgcatatcaaagagcg
gaagagctccacaacccatatataaagcggcttctggtcggttttggccgcacgtccgag
tttaatggcccttccatgccactcgatccgcaccctctcattcaagagatagataaagag
gtgcatggtcaaaactgcttgctgacaagctctttccaaatttttggttctgcgccacct
ctgcagacgattgattttgcccggaccctcatggactctgggaagctacaagctttagac
atcttatttaggcgactacgagctgaggaacatcgagtccttgtttttgcacaaatgaca
aagatgctaaacattttggaggactacatgaagtaccggaagtataagtacctccggttg
gacggatcatccacgattatggatcgacgcgacatggttaaagatttccaacacaggtct
gacatttttgtattcctactgagcacaagagccggaggtcttggcataaatttgacagca
gccgacaccgtcattttctacgagagcgactggaacccgactatggatttgcaggccatg
gacagagctcatcggcttggccaaaccaaggaggtgactgtttaccggctaatttgcaaa
ggaacagtcgaagagaagattgtgaagcgagcaaaccagaaaaacacagtccagcagctt
gtgatgactggaggacaatctcaagacgtgttcgaggccgacgaagtggtatctttgctg
ttggacgatgccgagcttgagcagcgattaaagcatcagaagtctctggagcaaacggat
aagccgagaggtaaaaagaatgaagtgagtaggaaggtcgtgcaaatcgacgctgatgag
gtggtgtccctgcaagacgacctcgccgcgggtgctggagactccgaaaagcttccggag
aaagccacgcctagcaggaggaagtccggacaaaagagacaagctggtgatgagatgaag
ccaccaaagccttccaaagtagccaaggaaactccaaccagcgatgctgcgaaagaggcc
aagccgagaagcaaggctaagccgaagaaagcctcgcaggatgtagagaagaaggtggca
gcgacatcggcgacaaggtga
DBGET
integrated database retrieval system