Selaginella moellendorffii: SELMODRAFT_430429
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Entry
SELMODRAFT_430429 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
smo
Selaginella moellendorffii
Pathway
smo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SELMODRAFT_430429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_430429
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SELMODRAFT_430429
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SELMODRAFT_430429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
9651382
NCBI-ProteinID:
XP_002992193
JGI:
430429
UniProt:
D8T9D9
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MYYPFRHDTNFKESSLNSSASTLLDSGTSGRPFASSFSGQSSTTPVFNHGGSIQGFSNVQ
GSYNMQTLPSSLSSRNAGLGGSSSGVHQPTGGLPSGRFASSNLPIGLSQLSQSSLHGHNS
MSNRAGLNVVGNHPLSSGMNGAGVSGPGMSPNTVTLGNRGSMTGLGGVQMGGGSGPRVQA
SVGNMAGAGAGSNLNRSLSSGGGLGVPSLSSSRMNLGPIPSGGGLGGGGPASGRAMSPML
QQSVNTTYSPSGDLLAMISRAGQMASANGQLGNLGLGSDGSQNDGAAFDINDFPVLSNRQ
SSGGGLQNPLAAFRKQGVNSLGQQNQEFSIQNEDFPALPGFKGGNGDLTSEMHHKERQHE
NSMGLMPPQHFGMHSSGQPGATGSQISLGLRSGSPAVVGSGGLGSYDLMHQYEHHQQPHF
RLGAHPQQLTAVGQPSRELGMRPLQDMDRFGLLGLLSVIRMTEPDLTTLALGTDLTTLGL
NLNSRENLYKTFASPWAEGPVKGDPEFTLPACYIQQQAPRLQPGNFGRLPQEVLFYIFYS
MPKDEAQLYAANELSNRGWFFHKAQHMWLTRVPNVEPLVKTNNYERGSYIFFDQNNWETT
RKENFVLHYDMLEKAPQLPPPPPAQS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtactatccgtttcgccatgataccaacttcaaagagtcttcgctaaacagctccgcc
tcgacactgcttgactctgggacttccggaagaccatttgcgtcttccttctcggggcag
tcttcgaccacgcccgttttcaaccacggaggatcgatacaggggtttagcaatgtccaa
gggagctacaacatgcaaactctacccagctcgttgtcgtctagaaacgcaggtctcggt
ggttcctcgagtggagtacaccagcccaccggaggactgcctagcggacggtttgcttcc
agtaatcttcccatcggactctcacagttgtctcagagtagtcttcacgggcataactct
atgagcaatcgtgccggacttaacgttgtaggaaaccatcctcttagtagtggtatgaat
ggagctggcgtctcgggtccagggatgtcaccgaatacagtgactttgggtaataggggg
agcatgacagggttgggaggggtccagatgggaggaggttcaggtcccagggtgcaggct
tcagtaggaaatatggcaggagctggagcagggagcaaccttaacaggagtttgagctcg
ggtggtggtttaggagtacctagtctaagttcgtctcgtatgaatttggggcccatacca
agtggtggcggcctcggtggaggaggaccggcgtcgggaagagccatgagtcccatgctt
cagcagagcgtcaacactacttacagcccctcaggcgacttgctggcaatgatttctaga
gcggggcaaatggcatccgcaaatggtcagctcggaaatctgggcttgggaagtgatggt
agccagaatgacggcgccgcgttcgatatcaacgacttccccgttttaagtaaccggcag
agttcaggtggtggtctccaaaatcctctagccgcattccgaaaacaaggcgtcaactcg
cttggccaacaaaatcaggagtttagcatacaaaacgaagatttccccgccttacctggt
ttcaaaggtggcaatggagacttgacgtccgaaatgcatcacaaggagcgccaacatgag
aactcgatgggtttgatgccgccgcagcatttcgggatgcattcttccggccaaccgggt
gcaaccggctcgcaaatatcactgggcctgcgctcgggaagcccggctgtggttggaagt
ggtggattgggttcttacgacctgatgcaccagtatgagcaccaccagcagccacacttc
cggctgggtgctcatcctcaacagcttacagcagtcgggcagccatcgagagagctagga
atgcgaccattacaggacatggaccgctttgggcttctaggcttgctgagtgtaataaga
atgactgaacctgacctcaccacgctcgcgctggggactgacttaacaactctaggacta
aacttaaactcgcgggagaacctctacaagacttttgcttctccttgggccgaaggacca
gtgaaaggcgacccggagtttactttgcctgcgtgctacatccaacaacaagctcccaga
ctccagcctggcaattttggaaggttaccgcaagaggtcctgttttacatcttttacagt
atgccgaaggatgaggcccaactctacgctgcaaacgagctatcaaacagagggtggttt
tttcacaaggctcagcatatgtggctcacgagggtgccgaatgtggagccgctagtgaaa
accaacaattacgagcgtgggtcttacatcttttttgatcaaaataactgggaaaccaca
cgaaaggaaaactttgtccttcactacgatatgttggagaaggcaccgcagcttccaccg
ccgccaccagctcaatcgtga
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