KEGG   Selaginella moellendorffii: SELMODRAFT_431142
Entry
SELMODRAFT_431142 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
smo  Selaginella moellendorffii
Pathway
smo03082  ATP-dependent chromatin remodeling
smo03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    SELMODRAFT_431142
   03083 Polycomb repressive complex
    SELMODRAFT_431142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_431142
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     SELMODRAFT_431142
  Histone modification proteins
   HAT complexes
    HATB complex
     SELMODRAFT_431142
   HDAC complexes
    Sin3A-HDAC complex
     SELMODRAFT_431142
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     SELMODRAFT_431142
    PRC2.2
     SELMODRAFT_431142
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     SELMODRAFT_431142
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    SELMODRAFT_431142
  Chromatin remodeling factors
   NuRD complex
    SELMODRAFT_431142
   NuRF complex
    SELMODRAFT_431142
   NuRF complex (fruit fly)
    SELMODRAFT_431142
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_2nd WDR55 NBCH_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_RFWD3 WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st MIOS_WD40 WD40_MABP1-WDR62_2nd
Other DBs
NCBI-GeneID: 9652101
NCBI-ProteinID: XP_002992983
JGI: 431142
UniProt: D8TBN3
LinkDB
Position
Unknown
AA seq 254 aa
MDDYHVWKKHTADLYDVVITHGLDWPVTSAQWLPDHQRILLGSKALDDPHDCLENCVLIV
KLAVPADLDAEIHENWMTQWIKHEEGQDVASLHLRHHTTKHENSGGLPSQVISQAQPEML
LKGHTKGGHGLPSGLDAYVGLTRSFQSSRAHRDPLESLAYHPYDEFCLATSSCDNTARIF
DTRALSQPLHTFVGHMDTVVCVAWSPNHPSVLVTSAEDHRLMLWDVKRIGEEQSAEDAKD
GPPELLFITVDTGT
NT seq 765 nt   +upstreamnt  +downstreamnt
atggacgattaccatgtgtggaagaaacacacggcagatctctacgatgtggtcattact
catgggctcgattggccggtcacgtcggcgcagtggctccctgatcatcagaggatcttg
cttggatccaaagcgctggatgatccccacgattgtctcgagaattgtgtcctcatcgtc
aagctcgccgtcccagccgatcttgacgccgagatccatgagaactggatgactcaatgg
atcaagcatgaagaaggacaggacgtcgcgagtttgcatcttcgacaccacaccactaag
cacgagaattccggcggcctgccgtcgcaagtgatctcccaggctcaaccggagatgcta
ctcaaggggcacaccaaaggcggccatggtctcccttccgggctggatgcgtacgtggga
cttacgagatcctttcaatccagtcgtgctcaccgagacccattggagtcactggcctat
catccttatgatgaattttgtctcgcaactagttcgtgcgataacaccgcccggatcttc
gacacacgcgcactctcccagcctctgcacacgtttgtcggtcacatggacacggttgta
tgcgtcgcctggagtcccaaccatccaagtgtcttggttacgtcggcagaagatcacagg
ctcatgctttgggacgtgaaaaggattggagaagaacagagcgctgaggatgccaaagac
ggaccacctgagctccttttcatcacggtggacactgggacatag

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