Selaginella moellendorffii: SELMODRAFT_431142
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Entry
SELMODRAFT_431142 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
smo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_431142
03083 Polycomb repressive complex
SELMODRAFT_431142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_431142
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
SELMODRAFT_431142
Histone modification proteins
HAT complexes
HATB complex
SELMODRAFT_431142
HDAC complexes
Sin3A-HDAC complex
SELMODRAFT_431142
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
SELMODRAFT_431142
PRC2.2
SELMODRAFT_431142
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
SELMODRAFT_431142
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_431142
Chromatin remodeling factors
NuRD complex
SELMODRAFT_431142
NuRF complex
SELMODRAFT_431142
NuRF complex (fruit fly)
SELMODRAFT_431142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
MIOS_WD40
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
9652101
NCBI-ProteinID:
XP_002992983
JGI:
431142
UniProt:
D8TBN3
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MDDYHVWKKHTADLYDVVITHGLDWPVTSAQWLPDHQRILLGSKALDDPHDCLENCVLIV
KLAVPADLDAEIHENWMTQWIKHEEGQDVASLHLRHHTTKHENSGGLPSQVISQAQPEML
LKGHTKGGHGLPSGLDAYVGLTRSFQSSRAHRDPLESLAYHPYDEFCLATSSCDNTARIF
DTRALSQPLHTFVGHMDTVVCVAWSPNHPSVLVTSAEDHRLMLWDVKRIGEEQSAEDAKD
GPPELLFITVDTGT
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggacgattaccatgtgtggaagaaacacacggcagatctctacgatgtggtcattact
catgggctcgattggccggtcacgtcggcgcagtggctccctgatcatcagaggatcttg
cttggatccaaagcgctggatgatccccacgattgtctcgagaattgtgtcctcatcgtc
aagctcgccgtcccagccgatcttgacgccgagatccatgagaactggatgactcaatgg
atcaagcatgaagaaggacaggacgtcgcgagtttgcatcttcgacaccacaccactaag
cacgagaattccggcggcctgccgtcgcaagtgatctcccaggctcaaccggagatgcta
ctcaaggggcacaccaaaggcggccatggtctcccttccgggctggatgcgtacgtggga
cttacgagatcctttcaatccagtcgtgctcaccgagacccattggagtcactggcctat
catccttatgatgaattttgtctcgcaactagttcgtgcgataacaccgcccggatcttc
gacacacgcgcactctcccagcctctgcacacgtttgtcggtcacatggacacggttgta
tgcgtcgcctggagtcccaaccatccaagtgtcttggttacgtcggcagaagatcacagg
ctcatgctttgggacgtgaaaaggattggagaagaacagagcgctgaggatgccaaagac
ggaccacctgagctccttttcatcacggtggacactgggacatag
DBGET
integrated database retrieval system