Selaginella moellendorffii: SELMODRAFT_43289
Help
Entry
SELMODRAFT_43289 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
smo
Selaginella moellendorffii
Pathway
smo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
SELMODRAFT_43289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_43289
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_43289
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
SELMODRAFT_43289
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
SELMODRAFT_43289
PBAF complex
SELMODRAFT_43289
GBAF(ncBAF) complex
SELMODRAFT_43289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
9629302
NCBI-ProteinID:
XP_002989799
JGI:
43289
UniProt:
D8T2I9
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
IKSGEANPAARRKRRKIGDRQIPDRVGALLPESALYSQLLEFEGRVDAALARKKLEIQES
VQNPPRYQRTLRMYVFNTYANQVNNHDPHMGYNPGEPPSWTLRIMGRIVGDDGETESAAA
KSLPFPKFSSFFKRITVQLDPAMYPENSTIVWDAGGGGGSAPVEGFEIKRKGDKELTAII
RLDMKYTPERYKLSPPLAELLGVEVETRARIIAAFWHYIKGKKLQNPSDPTVVNCDLPLQ
RILGEDRVKFTSILNRLHQHLSAPQPIQLEHKIKLSGKNPAGNACYDIVVDVVTPLQKDM
AMFLANMERHRDIEAYDELICSSIRKINEHRKRRAFFLGFSNSPVEFINGLIASQSRDLK
IINGQASRNAEKERRSDFYCQPWVEDAVIRYLNRRTA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atcaagagcggcgaagccaatcccgccgctaggcgcaagaggaggaagatcggcgatagg
caaatccccgatagagttggagctctcctccccgagtcggcgctctactcgcagctgctg
gagttcgagggccgggtggacgcggcgctggcccggaagaagctcgagatccaggagagc
gtccagaatccaccgcgctaccagcgaacgctacgcatgtacgtcttcaatacgtatgcg
aaccaggtaaacaaccacgacccacacatgggatacaacccgggcgagccaccctcgtgg
acgctccggatcatgggcaggatcgtcggggacgatggcgagaccgagagcgccgccgcc
aagagcttgccattcccaaagttctcctccttcttcaagaggatcaccgtccagctcgac
ccggcaatgtatcccgagaactccaccatcgtctgggatgccggcggtggcggcggcagc
gctcccgtggagggattcgagatcaagaggaaaggcgacaaggagctgaccgcgatcatc
cggcttgacatgaagtatactccggagaggtacaagctctcaccgccgctggcggagctc
ttgggtgtggaggtcgagacgcgagctcggatcatcgcggctttctggcactacatcaaa
gggaagaagctccagaacccgagcgatcccaccgtcgtcaactgcgacttgccactccag
agaatcctgggcgaggaccgcgtcaagttcacgtccatcttgaaccggctccaccagcat
ctctcggctccacaacccatccagctggagcacaagatcaagctgagcggcaagaacccc
gccgggaacgcgtgctacgacatcgtggtggacgtggtgacgccgctgcaaaaggatatg
gcgatgttcttggccaacatggagaggcacagggacatcgaggcctacgacgagctcatc
tgcagctccatccgcaagatcaacgagcaccgcaagaggagagccttctttctcgggttt
agcaactcgccggtggagttcatcaatggtctcatcgcttcgcagagccgggacctcaag
atcatcaatggccaggccagccggaacgcggagaaggagcgtcgatcggatttctactgc
caaccatgggtggaggacgcagtgatcaggtacttgaatcgaagaacagcc
DBGET
integrated database retrieval system