Selaginella moellendorffii: SELMODRAFT_437359
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Entry
SELMODRAFT_437359 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
smo
Selaginella moellendorffii
Pathway
smo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SELMODRAFT_437359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_437359
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_437359
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
SELMODRAFT_437359
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
SELMODRAFT_437359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
PHD_2
C1_2
SLX1_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
9641734
NCBI-ProteinID:
XP_002960239
JGI:
437359
UniProt:
D8QQE4
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MVGSCGGNYAATATLFRGVRFFLSGFDRAEECQDDPICAAARKDGKVLVTKSWVLDSLEQ
CELKNANSVLYMPVRDLAGIPGAKKVCVCLTGYQSASRREIEAMVAMMGASFTKPLDARK
VTHLVCYKFEGDKYELAEHMKLKLVNHRWLEDCLRTWSLVDEANYRISAHDLEIAEAQAK
DAQVSEQPNETNAAPPEIAPDPPDVDSEATTQLCEAEDDCVVEGENVTSKFMGSPMDTGN
DSATKQRVMDTVNDSAAKLAEQRVMDTGNDRATKSAEHRVMPSNARNESLSGGESESPSL
KKRKSFEASSDHKKTGEDSIRKRGRPLSSLSPRPRHSDRTMDGQSPDAVKQSPSKSSNGS
GKRIYIEPERSSFHSKSGSAAKKSGKHNAAGMGMDNKKEGSFKSRRLTRSGSKDSITDAN
GHETRRKSLSGSAEKLTSKDDAVESKHQPANEPKAQKQTDVINLDDEEEKKDEAAKEAAE
VPVKRGRGRPKKSKPIIPETTKDYRFALSGHTEEKRKHRLVIRSLHGHLCRDDHIWKEQT
THCVMGSPLRRTEKLFAALASGRWILKFDYLEACAKARRFVDEEPYEWFEPGDAKDGTID
LRAPRKWRLSKQETGCGAFEGLRVIVYGECILPSLGTLKRAIKAGGGAVVAVEPPYTIPL
ATGVDFAIVGLGIPENDPRVVEILKRKVACVRDEFFVEFVCNPSASWEKHVLFSTEAAVE
KALAKLATIKSYSSHKQSGGGEEDDGGGGAAAAVVAEEEMDRACNVCGRKDSEEVMLFCD
GDDCEVATHTFCLEPPLDKVPAGDWYCARCSS
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggtggggtcttgtggcggcaactatgccgccactgcgacgctctttcgcggcgtgcga
ttcttcctgtccggcttcgatcgcgccgaggagtgccaggacgatccgatttgtgctgct
gctagaaaagatgggaaggttcttgttaccaagagctgggtcctggactctctggagcaa
tgcgagttaaagaatgcaaacagcgttctttacatgcccgtcagggatctggctgggatc
ccaggtgctaagaaagtctgcgtttgtttgactggataccaaagcgcgtctcggcgagag
attgaggcaatggtagctatgatgggcgcatctttcactaaaccgttagatgctaggaag
gtgactcacctggtctgctacaagtttgaaggtgacaagtacgagcttgcggagcatatg
aaattaaagcttgtgaaccatcgctggcttgaggactgtttaaggacgtggtccttagtg
gacgaggcgaattacaggataagtgcccacgacctggaaattgctgaggcacaagctaaa
gacgctcaagtttctgagcaaccaaacgagacgaatgctgcacctcccgaaatcgctccg
gatccacctgacgtcgattcagaggctacaacgcaactgtgtgaggctgaagacgactgc
gttgtggagggtgaaaacgtcaccagtaagttcatgggctcacctatggataccggcaac
gacagtgctactaaacaaagggtgatggataccgtcaacgacagtgctgctaaactagca
gagcaaagggtgatggataccggcaacgaccgtgctactaaatcagcagagcacagggtg
atgccgagtaatgcaaggaacgagtcgctgtcaggaggggaaagcgaatctcctagtttg
aagaagaggaaaagttttgaggcgtccagtgaccataaaaaaactggcgaggattcaatc
aggaagagaggcaggcctttaagtagtctttcgccgcggcctcgtcactcggaccggact
atggatggccagagtcctgatgcagtgaaacagtccccgtcaaaaagcagtaacggatca
ggcaaaaggatctacattgagccggagagaagctcatttcactccaagtcaggatcggct
gccaaaaaaagtggcaaacacaatgcagcgggtatgggcatggacaacaaaaaggagggg
agcttcaaaagccggaggctgaccagaagcggttcgaaggacagtatcacggacgcaaac
ggacatgaaactcgaagaaagtccttatcgggatcagctgagaaactaactagcaaggac
gatgcagtggagtcgaagcatcagcctgcaaacgagcccaaggcacagaagcaaacggac
gtcataaatcttgatgatgaggaagagaaaaaagatgaagctgcaaaagaagctgccgaa
gtacctgtaaagcggggaagaggacgaccgaagaagtcgaagccgataatcccagaaaca
acaaaagactatcggttcgctttgagtggacataccgaggagaagaggaagcacaggctt
gtcattcggagcctccacggccacctctgcagggacgaccacatctggaaagagcagacg
actcactgcgtgatgggctcgccgcttcggcgaaccgaaaaactcttcgctgctctggct
tccggacgatggatactcaagttcgactatctggaagcttgtgcaaaggccaggagattc
gtcgacgaggaaccatacgagtggttcgagccaggagatgcaaaagacggaacgatcgac
ctgagagctccaaggaaatggcggctgtctaagcaggaaaccggctgtggtgccttcgaa
ggactgagagtgatcgtgtatggagaatgcattcttccctccttgggtactctcaaacgc
gccatcaaggccggaggaggagctgtggtggcggtggagccaccatacacaattcctcta
gcaaccggggtggacttcgcgatcgtcgggctgggaatccccgagaacgatccacgcgtg
gtggagatcctcaagcgcaaggtggcgtgcgtgagggacgagttcttcgtggagttcgtg
tgcaatccatccgcgagctgggagaagcacgtcctcttcagcaccgaggccgcggtggag
aaagctctcgccaagctcgccaccatcaagtcatactcatcgcacaagcagtcaggagga
ggagaagaggatgatggtggcggaggagcagcggcggcggtcgtggcggaggaagaaatg
gatcgagcttgcaacgtttgcggtcgcaaagatagcgaagaagtgatgctcttctgcgat
ggagacgattgcgaggttgcgacgcatacgttttgcctggagccgccgctggacaaagtt
ccagcgggagactggtactgtgctcgttgttcttcctaa
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