Selaginella moellendorffii: SELMODRAFT_439153
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Entry
SELMODRAFT_439153 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18464
WASH complex subunit strumpellin
Organism
smo
Selaginella moellendorffii
Pathway
smo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
SELMODRAFT_439153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_439153
Membrane trafficking [BR:
smo04131
]
Protein recycling
Others
WASH complex
SELMODRAFT_439153
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Strumpellin
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
9660496
NCBI-ProteinID:
XP_002965291
JGI:
439153
UniProt:
D8R0S0
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MELPDTETALVDKSQQLQLRNSILQSSIFQIEAGRKAAGPQVQKLSVEVVKSEKPLNPQE
EFQLRIQIMQCTNKLRKVLGGRRANMSSNGSETLAKAKGKGQRFLDMMDALDKQEKELDD
FKLQNASLQNKNVNCEKARQGSKAMLDFCEQSVGVALLQLVSRAQALIAELLRLSDRVPE
EFKSPGSIFAPLLFDFRYFKSPDVFEERIESNAELSSLDDEFRDKYSYLLERFFQLFNGI
VNYYVDLTRYLEDLQEGVYIQSTVESVLHNEDGCQLLVEALVLLGVVLILLEHRLDGTLR
ENLLVSYFRCKGTFDVPNFDSISTLCRHYPQPTSSPVVAVTAFLQSSPPPVPATMLNLHR
PEESFSRFPLPSSLVKTVIGRLKSHDLYNQVGHYPSPDHRTTALLGQAASLYVLLYFAPT
ILHSDSVMMREIVDKFFRVYWVLSTAKNAISSSITLSAVRVVSQEQISKVQTLLSDLSAF
LSEGVLNQDFVLNNISTLLSCARDCNATLRWLLLHKITTSRKLRELVSNQDMALLTLLLD
TSRLEFELKNVYGELLKKKESRWAESKTIVAECMNDLSAFFSGVKVLSRTIRDENLQQWF
SQMCSEVNSLDYSEAVTAGRKIQHIITALEEVEHFHQIQGSLQTKQYLSEARMQLQEMIR
TLNVQESTLATISVISDCSYSWGLIGEFTLLIQSQIQNDPFTVSKLQCLFLKLRSVMDIP
LLRLYQSQSADLDSVSEYYSSELINYVRNVLEIVPASMFTILNGVIKEQMMNLSEIPGRF
EKDSLKDYAKLDERYALAKATQRVAVFTQGIMSMKRTFIGAIELDPRQLLEEGIRRKLAE
EIDLALKKALVFSTGRTEDLEDKLEALSASLSSQRQSMEYFQDYAHVHGLKLWQEEYTNI
VNHNTELGCKHFLTKVHKQPTSILDSGSVNDDNFMNRVVLKLLNLTNPSKSMYLAPMTGW
FNAEGQELVGLRTFITLQESLGPVGVSGIDSIVSSHAARVLGKCISSFRSEIEVKLLDHL
QALEGAVRPLSVTPNGAVYAECIALISTSTECVTWVESLAHIGQLQLIRCLLSSQLRAAS
QLESGMVSFALEGLGTALFSTMETNSERTNGKSNGVLKELARQLQACGMFSPMKTTYITA
KPPAHISLFLFLITINQLTRFVLDKHLGTLVSKAKKTALDCCPLVAGFATLLHQFHPSHS
ILYIQARTPHYFLLDSYRLMLQYLAQFAQAHIGKSSESSTAPQWEVANTVAWILDFAKYA
RVSHEVLETSVPPLVLESFGTRALKVSITASSITENVQFLKLLTVVFEFENKVFPLDKVA
GSQERVNLSSPFSCALPSHLFAPRASGPIEYTYLDTASFIVNTGDNVVAELDHYFDKVHL
LLAQPYDSSENESSDAELLLEKVEIAVFLRLFYEAFTGAPIASSYHYMRFLELPLLEPDM
RAFVELANFVLVVADWDNISEPKKPKGHFSLDLLLDGLSRCWDTERSASPRWVISKDEFS
WRVSKDESSYQSLR
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggaacttccggataccgagactgcgcttgtggataagtcccagcaactacagcttcga
aactcgattcttcaaagctcgatttttcaaatcgaggcagggagaaaagctgcagggccc
caagtccaaaagctgtccgtggaggttgtgaaaagtgaaaaacctctcaatccgcaagaa
gaatttcagctacgaatacagattatgcaatgtaccaacaagcttcggaaggtgcttgga
ggcagaagagccaacatgtcgtcaaatggaagcgagacacttgcaaaagctaaaggaaag
gggcaaagatttctagatatgatggacgcgctggacaagcaggaaaaggagcttgacgac
ttcaagttgcaaaacgcgagcttgcaaaacaagaacgtaaattgcgagaaggcaagacag
ggttctaaagctatgctggatttctgcgagcagagtgtgggtgtagcgcttcttcagctg
gtaagccgagcacaggcgcttattgcagagcttttgcggctctcagatcgtgttccggag
gagtttaagtcgcccggatccatcttcgcgcctctgctgttcgatttcaggtacttcaag
tcgcctgatgttttcgaggagcgtatagaatcaaatgctgagctatcttccctggacgac
gagtttcgagacaagtattcttacttgttagaacggttcttccagctcttcaatggcatt
gtaaactactatgtcgatcttacacggtatctggaagatcttcaggaaggtgtttacatc
cagagcactgtcgaaagcgttctccacaacgaggatggttgtcaactgctagtagaagca
ttggtgcttctaggcgtcgtgctcattctccttgaacatcgtctcgatggaacactccga
gagaaccttttggtttcatactttcgctgtaaaggcacgtttgacgtcccaaacttcgac
tccatttctacgctttgccggcactatcctcagccaacatcttcgcccgtggtggctgtg
acagcgtttcttcaaagttccccgccaccagtcccggcaacgatgctcaacctgcacagg
ccagaggaatcgttttcacgctttcctttgccgagttctctggtgaaaacggtaattgga
aggctgaagtctcacgacctgtacaatcaagtcgggcactatcctagtccggatcacaga
actacagctcttcttggtcaagctgccagcctttacgtgctactctacttcgctccaacc
attcttcactccgatagtgtgatgatgcgggagattgtggacaagtttttcagagtttac
tgggtactttccacggcaaagaacgcaatttcatcgagcattacgctttctgctgtgcgt
gttgtgagccaggaacaaatctccaaggtccagacactcttgtcagatctctctgccttc
ttatcggaaggagttctgaatcaggatttcgtgctcaacaatatctcaactctactgtct
tgtgcccgggactgtaatgcgacattacgatggctgctgcttcataagatcaccaccagc
cgtaaacttcgagaattggtatcgaaccaagatatggctttgctgactttattgctggac
acttcacggctggagttcgagcttaagaatgtctacggtgaacttttgaagaaaaaagaa
tcccgttgggctgaatccaagacgatcgtcgctgaatgcatgaatgacctctctgcgttc
ttttcgggggttaaggttctgtcgaggactatcagagatgagaacttgcaacaatggttc
tctcaaatgtgttctgaggttaattctttagactattccgaggcagtaactgcaggtagg
aaaattcaacacataattacggcgcttgaagaagttgaacattttcatcaaatacaagga
agtcttcagactaagcaatacttgtcagaggcgcgaatgcaattgcaagaaatgattagg
acactcaacgtgcaagaaagtacccttgctactatatcagtgatcagcgactgctcttac
tcatggggcttgataggagaatttactcttcttattcaatctcaaatccaaaatgatcca
ttcactgtatcgaaattacagtgtttgtttctcaagctgcgctctgttatggatatacca
ctcttgaggctatatcagagccaaagtgcggacctcgactctgtctcagaatactactca
tctgagcttataaactacgtgcgaaatgttttggaaattgtccctgccagcatgtttacg
attctcaacggggtaatcaaggagcaaatgatgaacttaagcgagataccagggcggttt
gagaaagattccttgaaagactacgcgaagctggatgagcgttacgcgttggcaaaggca
actcaaagagttgctgtatttacgcagggaataatgtcaatgaaaagaactttcattggc
gcgattgagctggatccaaggcaacttcttgaagaaggaatacgtagaaaactagcagag
gagatcgacttggctttgaaaaaagcattggtcttttctacaggtcgaactgaagatctt
gaagacaaactagaagcattatccgcctcattatcctcgcaacgccagtcaatggaatat
ttccaggattacgctcacgttcacggcctaaagctttggcaagaagaatatacaaacata
gtaaatcataatactgaactgggatgtaaacactttctgacgaaagttcacaagcagccg
acgtccatacttgattcagggagcgtcaatgatgataattttatgaatcgagttgtgcta
aaactgctcaaccttacaaatccttcgaaatctatgtacctcgccccaatgaccggctgg
ttcaatgcggaaggccaagagcttgtgggtttgagaaccttcatcaccttgcaagagagt
ctcggacctgtcggagtatctggtattgattcgatcgtttcttctcatgctgcgagagtg
ctcgggaagtgtatctctagtttccgctccgagattgaagtcaagctgctagatcactta
caggcgttggaaggtgcggttagaccactttctgttacccccaatggagctgtatacgct
gagtgtattgcgttgatatcaacaagcaccgagtgcgtaacatgggtggagtcattagcg
cacattggacagctacaactcattcgatgccttctttcatcgcaattacgtgcagcatct
cagttggagtcgggcatggtctctttcgcgttggaaggtctcggtactgctctattttct
accatggaaactaatagcgagcgtacaaatgggaaaagcaacggagttttgaaggagcta
gcgaggcagcttcaagcatgcggcatgttttcgccaatgaaaactacctacatcacagcg
aaaccccctgctcacattagcctcttcttgttcctcatcaccatcaatcagcttacacgc
tttgtgcttgacaagcacttgggaacactcgtgagcaaagccaaaaagaccgcgctggat
tgctgccctctggtggctggcttcgctacactgctccatcagtttcacccctcccattca
atcttgtacatacaggcaagaactccacactacttcttacttgattcttaccggctcatg
ttgcagtacctggcacaatttgcacaagcgcacatcgggaagagctcggaatcatcaaca
gcaccgcagtgggaggttgcgaacactgttgcatggatactagacttcgcgaagtacgcg
cgagtgtctcacgaggtcctcgagactagtgtgcctcccttggttctggaaagctttggg
acaagagctttaaaggtgtctattactgcatcttcaatcactgagaatgtccagttcttg
aaactcctgacagtggtattcgagtttgagaacaaggtgtttccactggacaaagttgcc
ggttcccaggagagagtgaacttgagctcgcctttctcctgtgcacttccaagtcatttg
tttgctcctcgggcatccggtcctatcgagtacacttatctcgacacggccagcttcatc
gtcaacacgggcgacaacgttgtggccgagcttgatcactactttgacaaggtccatctc
ttgctggcgcagccgtatgacagtagtgagaatgaatccagtgacgctgagctcctgctc
gagaaggttgagatcgcagtgtttctgaggctgttctacgaggctttcactggcgctcca
atcgcttcttcataccactacatgcgcttcctggagctgcctctcttggagccggacatg
cgagcgtttgtggagctagccaacttcgtgctggtggtagccgactgggacaacatcagc
gagccaaagaagccaaaaggccacttctctttggatctacttctggatggcctgagccgc
tgctgggacactgaaagatcggcttctcctcgctgggtgattagcaaggatgagttctcc
tggcgagtgtcgaaagatgaatcatcctatcagtctcttagatga
DBGET
integrated database retrieval system
