Selaginella moellendorffii: SELMODRAFT_439243
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Entry
SELMODRAFT_439243 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
smo
Selaginella moellendorffii
Pathway
smo00040
Pentose and glucuronate interconversions
smo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
SELMODRAFT_439243
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
SELMODRAFT_439243
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Ortholog
Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9655360
NCBI-ProteinID:
XP_002965776
JGI:
439243
UniProt:
D8R312
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MPGSLGGFLVWCLLLSLRLGWPLENEPTDALATSSEKEIVIPVPLDGTGRKLLASEKKEK
KKKKKKKKKKSSYNYYKPKYVSFASSFTGNTIDDCWVGGDWRGDRMHLADCAVGFGAGAA
GGRGGKVYQVTDPGDDPVQPWPGTLRYGVTRSGPLWITFSRDMNIRLKAELLITSYKTID
ARGANVQIGLNGPCLTLQYVDHVIIHGLTLRDCKPSSSGRVISSVDHTGFRGGSDGDAIA
IFGSSNVWIDHCSLSRAQDGLIDAIHGSTAITISNNYFSDHDKVMLLGHSDSYSADRNMK
ITVVYNHFVGCVQRMPRGRFGYFHVVNNNYENWDMYAIGGSANPTFFSEANRFLATGAKQ
VTKREAKGGSNWLWQSSGDLFVNGAYFVESGGGDASPHYSGGQYFATRSASMVTRLTANA
GPLGL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaagtcttgggggctttctggtatggtgtttgcttttgagcctgcgacttggc
tggccccttgaaaacgaaccaacagatgcgctagctacgagcagtgagaaggagattgtg
attcctgtgccgctggatggcactggacggaagctgctcgcttcagagaagaaggagaag
aagaagaagaagaagaagaagaagaagaagagttcttacaattattacaaaccaaagtac
gtctcgtttgcttcaagcttcaccgggaacacgatcgatgactgctgggtggggggtgat
tggaggggcgatcgtatgcacttggccgactgtgctgtgggatttggagccggtgctgct
gggggccggggtggtaaagtctatcaagtcactgatcctggtgatgatcccgtgcaacct
tggcctggtactctcagatacggagtgactcggtctggcccgctctggatcacattctcg
agagacatgaacatcaggctcaaggccgagctgctgatcaccagctacaagacgatcgat
gcacgaggtgctaacgtgcaaataggactaaacgggccgtgcctaactctccagtacgtc
gaccacgttatcatccacggcctcaccttgcgcgactgcaagccgagctcgtccggaaga
gttatttcgtcagtcgatcacacaggctttcgaggagggtcagatggagatgccattgct
atcttcggctccagcaacgtttggattgatcactgctcgctatcgagggcgcaggatgga
ttgatcgacgctattcacggatccacagcaatcactatctcaaacaactatttctctgac
catgacaaggtaatgctcctcggtcactccgatagctactcggcggacagaaacatgaaa
ataaccgttgtctacaatcacttcgtgggatgtgtgcagcgtatgccaagggggcgattt
ggctacttccatgtcgtgaacaacaactatgaaaactgggacatgtacgcaatcggtggc
agtgccaatccaacgttcttcagtgaagccaacagattccttgctactggcgccaaacag
gtgacgaaacgagaagcgaagggtggatcaaactggctatggcagtcttctggagacctg
tttgtaaacggggcctactttgtagagtctggaggtggagacgcctcgccacactacagc
ggtggacaatactttgcgacgagatccgcgtcaatggtaactcggctgacagcaaatgcc
ggtcccttgggtttgtga
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