Selaginella moellendorffii: SELMODRAFT_439324
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Entry
SELMODRAFT_439324 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K06677
condensin complex subunit 1
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_439324
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
SELMODRAFT_439324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
PDS5
Adaptin_N
RRM_1
DUF3427
Motif
Other DBs
NCBI-GeneID:
9634314
NCBI-ProteinID:
XP_002965540
JGI:
439324
UniProt:
D8R3K5
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MAPCFVIPQSGGLEELEKDCGEEDFLVVQRDFSTADGEELAKEVAFQLGDNEVTCIEEQA
IFDQLFAIVKNFPSLQPSTKRLIIESLCSNFTLLIASIASLKREDAESDPALLCQQIHSQ
QNALKLYSFFLQQIYTLEEAPCSDSQKTKASTKSKQPRKKNPTLSWKWEDFRARIVSSVT
RVLEADLQLLYGMARPENGLLNFLAKFGLKLLENPTVMKDKEAKDEVCKFLATCAVKYDY
HEQLLPSLIDLLHKCEHVPIPLADLVTVSDKSYGDNTLAVGILREIGMTGQAEYNRLPTV
ADNVKLFLVELADRLPKVLAANLSVLMPHFGGESYKIRNALVTVLGRLVVKAFGDNDSNL
SEDIRLRNKQAMLDVLIERTRDTNAFTRACVLQTWGYLCEQNSLSISLWNQVVDIAAGRL
HDKAVLVRKNALQLLTTLLEYNPFGPMLKTGRFEATLEIYKLQLEKMTQGSGTSGETETE
TARFKPQEEAANDNETQDTATFESQGPPETQKRCDIGSLEQTRALVASLESALHFSRTMA
STIPVISQLFSSSAIFDVQQSIQFLTKCHKFSIDGAEECMRKMLPLERSIYEAVEGAFVV
TYIKKSPQETASNLLQLVLEAPVGHLTSIEALLISLVKKREIPAGTEPALWDIFTFNSVG
VTPEQCRCALSLFCMIAKASPKVFSSRIQNVVDIGFGRWAKQESLLARFACLALQRLSIE
DKQQLQPGHKVFSILASLISDQLLPDEIWYSAAEQAISAIYAIHPVPEAFMSALMLKFLD
AALQKTDEGLDSSLLSRFLFATGHVALKHLVYIESCVRGIRKQKCDKEREAAAVDANAAE
DGVSSSKDEGINAELGVAAAEDVKLDYLLEKAEREIVSGSETRKLLIGSISPLVSKLCKN
STVLQKFPQLRSSVVLCLCKLMAVDSNYCDANLQLLFTLAQNSPEDAIRSNCIISLGDIA
FRFPNLLEPWTENIYARLHDRSDYVRKNAVLVISHLRQLFGIYIDRHLQVKGHISEMAIR
TQDENSRISELAKLFFSELSKRGTSPIYNFLPDILSRLSCSTNISGDTFRNIMQFLLDFI
KKDRQIEGLIEKLCNRFVGTSDRAQWQAIAYCLSQLTFTDKAMKRLIDLFKQFANALVDE
QVLDSFKTICSKAKKLAKQDYRQLLEEFELKITACHEQKREEEVAAMEAQHVADNGIRCE
SNGAFKNDEEQASSTVSSNGSTSGEDEEVCPRTPVASSVKPGSVDGDDYSSGSEHRSHVS
TNSRESSGGSMNGDDSSTKCKHRSRVSTRSKVTLENSERSPVSIDSYAKRENSESLDGGH
TDEEEENPLRLGAGCIQRYSILGFVPRSASIPLPTASPGRMAEAEIEELLDFDGSDYEFG
SDEGAGEEEDVDYRVVGEDASMGQDDAADPVEGQAASMDSLEISGSVEPQREPDRAIERG
GRMPESRSTRHSSKTDLEDGEFFDMAPMVNSKKQAEHGVVKDGKLSRKQHSNETMRALSD
REAERNTGSRQDRKRRRDHDYERHLYSSPRSRKQPHERYTGRYDRPHGGDRRYDRVGDFP
DSRIRGPPFYRPNYSPGIMGPGRPDMNHVRACTAGLEIFSPAQLQELLNQEHMLRSQQML
HLARLGIRPPPGQPMYPLMGPNDFRPPFQPMGSDITSRMNFMGGPLGVQGPRSCFPPTGR
GPGILGGAGFPRPPRNEALALGSGRVQPRPSTANAQVENGKYPARSVPSTKHEQDSPRRN
DRDREPESRSKRTASTFDARLERDNREKCSKGSDPAGNLIHLGGPVQKSRVLTVGGLLEN
TPMSTVADAFEKQGKILDFRKNQTGDVFTITFSSVQEAVSAKRHLHRSMLAGRQITVEYA
VV
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggcgccatgtttcgtgatcccacagagcggcggccttgaggagctcgagaaagattgc
ggtgaggaagattttctcgtcgtccagcgcgatttctcgacggccgatggcgaggagctc
gccaaagaggtcgcgttccagctcggtgacaatgaggtcacctgcattgaggagcaagcg
attttcgatcagctgtttgccattgtcaagaatttcccctctttgcagccctcaacaaag
agactgattatcgaaagcctttgctcgaattttacactccttatcgcaagcatcgcgtcg
ttgaagcgtgaagatgcggagagtgatccagcacttttgtgtcagcaaatccactcccag
caaaacgctctcaaattatactcgttttttcttcaacaaatctatactctcgaggaggcg
ccttgctcagactcgcagaagactaaagcatcgactaagagcaagcagcctcgtaagaaa
aatccaactttgtcttggaagtgggaagactttcgagctcggatagtatcatcagtcacg
cgtgttttggaggcggacttacaacttctctatggcatggcacggcctgagaatgggctt
cttaacttccttgcaaagttcgggctgaagctactcgaaaatccaaccgtcatgaaggac
aaagaagcaaaagacgaagtttgcaagtttctagcaacgtgtgctgtcaagtatgattac
cacgagcaactcttgccttccttgatcgacttgctacacaaatgcgaacatgtcccgatc
ccgttagcagatctggtgactgtctcggataaatcatatggcgacaacactctggcagtg
gggattctgagggaaatcggcatgacaggccaagcagagtataaccggttacctacagta
gcagacaatgtgaagcttttcctcgtggagctggcggacaggttacccaaagtgttggcc
gccaacctcagcgttcttatgccgcactttggaggggagtcgtacaaaataaggaacgct
cttgttacggtgctgggaaggcttgtggtgaaggctttcggagacaatgacagcaactta
agcgaagatatcaggctccggaacaaacaggccatgctcgacgttctaatagaacgaacc
cgtgacacgaatgcttttacgcgggcttgtgtgctgcagacatggggttacctgtgcgag
cagaattccctgtcaatcagcctctggaatcaggttgtggacattgccgctggtcgtcta
catgataaagcagttcttgtgaggaaaaacgctcttcaactcctcacaactttactggag
tacaatccgtttggacctatgctcaagactggccgttttgaagcgactctcgagatctac
aagctacagttggagaaaatgactcaaggaagtggaacttccggggaaacggaaacggaa
actgcaaggtttaagccacaagaggaggctgccaacgataacgagacgcaagacaccgct
acatttgagtctcaaggtccccctgagacgcaaaagcgctgcgatattggaagtcttgag
caaaccagagctctcgtggcctcgctggagtctgcgttgcatttttctagaacgatggcg
tcaactataccagttatatctcaactcttctcgtcttccgcgatttttgacgttcagcaa
agtattcagtttcttacaaagtgccataagttcagcattgatggagcggaagaatgtatg
cggaagatgctgcctctggaaaggagcatatatgaagctgtggagggtgcctttgtcgtg
acgtatataaagaaaagtccgcaagagactgcctctaatctcctccagctagttcttgaa
gccccagtcgggcatctgacgtccatcgaggctcttttgattagtctcgtgaaaaagagg
gaaattcctgctggcacggagccagcgttatgggatatttttacgttcaactctgttggt
gtaacaccggagcaatgccgatgtgctttgtccttgttctgtatgatagcgaaagcatct
ccaaaggtgtttagctctcgtatacagaacgtggtggacattggttttggacgatgggcc
aagcaagaaagtttactggcacgattcgcctgtctcgcccttcaacgcctctcgatcgag
gacaagcagcagcttcaacctggccacaaagttttcagcatacttgccagcttaatctcc
gatcaacttctacccgatgagatctggtactcggcagcagaacaggctataagcgcgata
tatgccattcatcccgttccagaggcgtttatgtcagctctaatgctgaagttcttagat
gctgctcttcaaaaaaccgatgaaggactggactcgagcttattaagcaggtttctgttt
gccacggggcacgtcgcgctaaagcatctggtttacatcgagtcatgcgtcagaggcata
cgaaaacaaaaatgtgacaaagaaagagaagcagcagctgttgatgctaatgcggcagaa
gatggagtttcatcttccaaggacgaaggcattaatgcagaactgggagtcgctgctgca
gaagacgtcaagcttgattatcttctggaaaaggcggaacgtgaaatcgtctctggctca
gaaactagaaagctccttattggtagcatttctcctctggtttccaagctttgtaagaac
tccactgttttgcaaaagtttcctcagctccggtcatcagtagttctatgtctgtgtaaa
cttatggcagtagattccaactactgtgacgcaaacctgcaattgttatttactcttgct
caaaattcccccgaggatgcgattcgctcgaactgtattatttctcttggagatattgca
tttcggtttccaaacttactggaaccatggacggaaaatatatacgcccggctgcacgac
agatccgactacgtgcgcaagaatgctgtgcttgtcatctctcacctgaggcagctgttc
ggtatttacatcgatcgtcacttacaggttaagggacatattagcgaaatggctatcaga
actcaggatgagaacagtcgaatttcagagcttgcaaaacttttcttcagcgagctatca
aaacgagggacaagtccaatttacaattttctcccggatatccttagccgtttgtcatgc
tctactaacatcagtggagatacctttcgtaatatcatgcagttcctcttagacttcata
aagaaggatcggcaaattgaaggcttaattgagaagctgtgcaacagattcgttggaaca
tctgatcgagcacagtggcaagcgattgcttactgcctttctcagctgacttttactgac
aaggcaatgaaaaggttgatcgacttgtttaaacagtttgccaatgctttggtcgacgag
caggtcctggattctttcaaaaccatatgcagcaaggctaagaagctggctaagcaggat
tatcgacagctcctggaagagtttgagctcaagataactgcatgccacgaacaaaagaga
gaagaggaggttgcagcgatggaagcccagcacgtcgcagacaacggcatacggtgtgag
tcgaatggagctttcaaaaacgatgaagagcaggcatctagcactgtgagctcaaacgga
agcacgtcgggagaagacgaggaagtttgcccgaggactcctgttgcctcaagcgtcaag
cctgggagcgtggatggagacgattacagcagtggaagcgaacaccggtctcatgtttcg
actaactcgcgtgaaagttctggtggtagcatgaatggagacgactccagcacaaaatgc
aaacaccgctctcgtgtttcaacgaggtccaaagtcacgcttgaaaactccgagagatct
ccggtttcgatcgattcgtatgcaaagcgtgaaaactccgagagcttggacggaggacac
acagacgaagaagaagaaaatcctctgaggctgggcgctggctgcattcaacgctactcc
atcttagggtttgtgccgcgatcagcatcgattcctctgccgactgcatcacctggtcga
atggcggaggcagagatcgaagagctgctagatttcgatggctcggactacgaatttgga
tccgatgaaggagccggcgaggaggaggatgtagattatcgtgtagttggggaggatgcc
agtatggggcaggacgatgcagcagatccggtggaagggcaggccgcgagcatggattct
ctcgaaatatcggggtctgtagaaccgcagagagagccggatcgtgctatcgaaagaggg
ggaagaatgccagagtccaggagtactaggcattcttcaaagactgatctggaggacggc
gagttcttcgacatggctcccatggtgaatagcaagaagcaagctgaacacggcgtggtg
aaggatggtaaactttcaaggaagcaacactccaacgagaccatgcgagccttatcagat
cgtgaggcagagagaaacacgggctcccggcaagacaggaaacgacgacgggatcatgac
tacgaaaggcacctgtacagcagcccccggagccgaaagcaacctcacgagagatatacg
ggaagatatgatcggccccatgggggtgacagacgatacgatcgcgttggagactttccc
gattctaggatccgaggacccccgttttaccgccccaattattctcccggaatcatgggt
cctggaagacccgacatgaaccatgttcgtgcatgtactgccggtttagaaatcttctcg
cccgcccagttgcaagaactcttaaaccaggaacacatgctacgatctcagcaaatgctg
catttggcaaggcttggtatccgacctcctcctggccaaccaatgtaccctttaatgggt
cctaatgattttcggcctccgttccagcctatgggatccgacataacttctcggatgaac
ttcatggggggacctctcggagtccaaggcccccgatcgtgttttcctccaacgggacgc
ggcccaggcatcctcggtggtgctggtttcccaagacctcctaggaatgaggcgttggct
cttggttccgggagggtccaaccgcgtccgagcacagccaatgcacaagttgagaatgga
aagtaccctgccagaagtgttccgtcaacaaagcatgaacaagattcgcctcggaggaac
gacagggaccgggagccagagtcaagatccaaaagaacagcgagcacttttgacgcaagg
ttggaacgcgacaacagggagaagtgtagcaaaggaagcgatcccgcgggaaacttaatc
catcttggcgggcccgtccagaaaagcagggtcttgacagtcggtggcttgctcgagaac
acgccaatgtcgactgtcgctgacgcgtttgaaaaacaaggcaagattcttgatttccga
aagaatcaaaccggcgacgttttcacgataactttctcgagtgtacaagaggccgtgtct
gccaaaaggcacctgcacaggtctatgctcgcagggcgacagattactgtagagtatgca
gtggtgtga
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