KEGG   Selaginella moellendorffii: SELMODRAFT_439561
Entry
SELMODRAFT_439561 CDS       T01496                                 
Symbol
TIR1B-1
Name
(RefSeq) hypothetical protein
  KO
K14485  transport inhibitor response 1
Organism
smo  Selaginella moellendorffii
Pathway
smo04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:smo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    SELMODRAFT_439561 (TIR1B-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_439561 (TIR1B-1)
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     SELMODRAFT_439561 (TIR1B-1)
SSDB
Motif
Pfam: Transp_inhibit F-box_5 LRR_At5g56370 F-box-like F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 9652331
NCBI-ProteinID: XP_002966544
JGI: 439561
UniProt: D8R5Z3
LinkDB
Position
Unknown
AA seq 633 aa
MVYEFPDDILEHVLVFLSSHRDRNSVSLVCKSWYKAEAASRANLFIGNCYSVSPELVARR
FPKVRSLTLKGKPRFADFNLLPPHWGAYLLPWIVTFAHASLPLEELRLKRMCVSDEALDL
LATSFPGFRVIVLNNCDGFSTKGLASIARNCRNLQELNLQESLVEDHSSVDWISAFPDST
TSLLALHFSCLDAAVDFDALDALVARNPQLRSLGLNKKVALWQLQKLLHRCGPQLTDLGT
GSMSGIGNLNGGGAVGVGGLPLPLPQQLQAQMQVQVQVQPPQPAPEQQEMIQWERIQDLG
ACLSSCTKLQSLSGIWEAEPPCLIALYPVCLNLLSLNLSYANLRNADLLQLLSHCHKLQR
LWLQDNVEDAGLRIVANTCKDLRELRVFPADHEGVGVVTEQGLLAISEGCANLSSILYFC
RRMTNSAITAMSRACSKMRRFRLCIITTRQPDHVTGEPLDEGFGAIVKNCKELKRLAVSG
LLTDRAFQYIGEFGKNVETLSVAFAADSDVGLEAVFRGCTKIRKLEIRDCPFGDRALLAG
LERYETMRFLWLSGCRVSIAGCDELSKKLPWLNVELVKESTEDEYTVDMLYVYRTVMASA
RSDRPPSVIGLRGGEYFWRWVRGAAVGTSNSSI
NT seq 1902 nt   +upstreamnt  +downstreamnt
atggtgtacgagttcccggacgacatcctcgagcacgtcctcgtcttcctctcctcccac
cgcgatcgcaactcggtgtcgctcgtctgcaagtcgtggtacaaggccgaggccgccagc
cgcgccaacctcttcatcggcaactgctactcggtctcgccggagctcgtcgcgcgacgc
ttccccaaggtgcgctccctcacgctcaagggcaagccgcgcttcgcggatttcaatctc
ttgcccccgcattggggagcctacctcctgccatggatcgtcaccttcgcgcacgcgtca
ctcccgcttgaggagctccgcctcaagcggatgtgcgtgagcgacgaggcgctcgatctc
ctcgccacctccttcccaggcttccgcgtcatcgtgctcaacaattgcgacggcttcagc
accaagggcctcgcctccatcgccaggaactgccggaacttgcaggagctcaacctccag
gagagcctggtggaggatcacagcagcgtggactggatcagcgccttcccggacagcaca
acctcgctcctcgcgctccacttctcctgcctggacgcggcggtggacttcgacgccctg
gacgcgctggtcgcccgcaacccgcagctccggagcctgggcctcaacaaaaaggtggcg
ctgtggcaattgcagaagctgctccaccgctgcgggccgcagctcacggatctgggcacg
ggctcgatgagcggcatcgggaaccttaacggcggcggagcagttggcgtaggcgggctt
ccgcttccgcttccgcagcagcttcaggcgcagatgcaggtgcaggtgcaggtgcagccg
ccgcagccggctccggagcagcaggagatgattcagtgggagcggattcaggacctgggt
gcgtgcctctcgagttgcaccaagctgcagagcttgtccgggatctgggaggcggagccg
ccgtgtctcatcgcgctctacccggtttgcctcaacctcctctcgctcaacctcagctac
gccaacctccgcaacgcggatctcctccagctgctcagccactgccacaagctccagagg
ttgtggctccaggacaatgtcgaggacgcggggctgcgcatcgtggccaacacctgcaag
gatcttcgcgagctgcgggtgttcccggcggatcacgagggcgttggcgtggtgaccgag
caaggcctgctcgccatctccgagggctgcgccaacctctcctcgatcctctacttctgc
cgccggatgacgaactcggccatcactgccatgtcgcgcgcctgctccaagatgcgccgc
ttccgcctgtgcatcatcaccacccggcagccggatcacgtcacaggcgagccgctggac
gagggattcggcgccatcgtcaagaactgcaaggagctcaagcgcctcgcggtctcgggc
ctgctcaccgatcgcgccttccagtacatcggcgaattcggcaagaacgtggagacgctc
tcggtggcgttcgcggcggacagcgatgtgggactggaggcggtgttccggggatgcacc
aagatccgcaagctggagatccgcgactgcccgtttggcgatcgcgcgctcctggcgggg
ctggagcgctacgagacgatgcgcttcctctggctctcgggctgccgggtgagcatcgcc
ggctgcgacgagctgtccaagaagctgccatggctcaacgtggagctcgtcaaggagagc
acggaggacgaatatacggtggatatgctgtacgtctaccgtacggtgatggcgagcgcg
aggagcgaccgcccgcccagcgtcattgggctgcgcggcggggagtacttttggcggtgg
gtgcgcggcgccgcggtgggcacgtccaattcgagcatctag

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