Entry |
|
Symbol |
TIR1B-1
|
Name |
(RefSeq) hypothetical protein
|
KO |
K14485 | transport inhibitor response 1 |
|
Organism |
smo Selaginella moellendorffii
|
Pathway |
smo04075 | Plant hormone signal transduction |
|
Brite |
KEGG Orthology (KO) [BR:smo00001]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
SELMODRAFT_439561 (TIR1B-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:smo04121]
SELMODRAFT_439561 (TIR1B-1)
Ubiquitin system [BR:smo04121]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
SELMODRAFT_439561 (TIR1B-1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
633 aa
MVYEFPDDILEHVLVFLSSHRDRNSVSLVCKSWYKAEAASRANLFIGNCYSVSPELVARR
FPKVRSLTLKGKPRFADFNLLPPHWGAYLLPWIVTFAHASLPLEELRLKRMCVSDEALDL
LATSFPGFRVIVLNNCDGFSTKGLASIARNCRNLQELNLQESLVEDHSSVDWISAFPDST
TSLLALHFSCLDAAVDFDALDALVARNPQLRSLGLNKKVALWQLQKLLHRCGPQLTDLGT
GSMSGIGNLNGGGAVGVGGLPLPLPQQLQAQMQVQVQVQPPQPAPEQQEMIQWERIQDLG
ACLSSCTKLQSLSGIWEAEPPCLIALYPVCLNLLSLNLSYANLRNADLLQLLSHCHKLQR
LWLQDNVEDAGLRIVANTCKDLRELRVFPADHEGVGVVTEQGLLAISEGCANLSSILYFC
RRMTNSAITAMSRACSKMRRFRLCIITTRQPDHVTGEPLDEGFGAIVKNCKELKRLAVSG
LLTDRAFQYIGEFGKNVETLSVAFAADSDVGLEAVFRGCTKIRKLEIRDCPFGDRALLAG
LERYETMRFLWLSGCRVSIAGCDELSKKLPWLNVELVKESTEDEYTVDMLYVYRTVMASA
RSDRPPSVIGLRGGEYFWRWVRGAAVGTSNSSI |
NT seq |
1902 nt +upstreamnt +downstreamnt
atggtgtacgagttcccggacgacatcctcgagcacgtcctcgtcttcctctcctcccac
cgcgatcgcaactcggtgtcgctcgtctgcaagtcgtggtacaaggccgaggccgccagc
cgcgccaacctcttcatcggcaactgctactcggtctcgccggagctcgtcgcgcgacgc
ttccccaaggtgcgctccctcacgctcaagggcaagccgcgcttcgcggatttcaatctc
ttgcccccgcattggggagcctacctcctgccatggatcgtcaccttcgcgcacgcgtca
ctcccgcttgaggagctccgcctcaagcggatgtgcgtgagcgacgaggcgctcgatctc
ctcgccacctccttcccaggcttccgcgtcatcgtgctcaacaattgcgacggcttcagc
accaagggcctcgcctccatcgccaggaactgccggaacttgcaggagctcaacctccag
gagagcctggtggaggatcacagcagcgtggactggatcagcgccttcccggacagcaca
acctcgctcctcgcgctccacttctcctgcctggacgcggcggtggacttcgacgccctg
gacgcgctggtcgcccgcaacccgcagctccggagcctgggcctcaacaaaaaggtggcg
ctgtggcaattgcagaagctgctccaccgctgcgggccgcagctcacggatctgggcacg
ggctcgatgagcggcatcgggaaccttaacggcggcggagcagttggcgtaggcgggctt
ccgcttccgcttccgcagcagcttcaggcgcagatgcaggtgcaggtgcaggtgcagccg
ccgcagccggctccggagcagcaggagatgattcagtgggagcggattcaggacctgggt
gcgtgcctctcgagttgcaccaagctgcagagcttgtccgggatctgggaggcggagccg
ccgtgtctcatcgcgctctacccggtttgcctcaacctcctctcgctcaacctcagctac
gccaacctccgcaacgcggatctcctccagctgctcagccactgccacaagctccagagg
ttgtggctccaggacaatgtcgaggacgcggggctgcgcatcgtggccaacacctgcaag
gatcttcgcgagctgcgggtgttcccggcggatcacgagggcgttggcgtggtgaccgag
caaggcctgctcgccatctccgagggctgcgccaacctctcctcgatcctctacttctgc
cgccggatgacgaactcggccatcactgccatgtcgcgcgcctgctccaagatgcgccgc
ttccgcctgtgcatcatcaccacccggcagccggatcacgtcacaggcgagccgctggac
gagggattcggcgccatcgtcaagaactgcaaggagctcaagcgcctcgcggtctcgggc
ctgctcaccgatcgcgccttccagtacatcggcgaattcggcaagaacgtggagacgctc
tcggtggcgttcgcggcggacagcgatgtgggactggaggcggtgttccggggatgcacc
aagatccgcaagctggagatccgcgactgcccgtttggcgatcgcgcgctcctggcgggg
ctggagcgctacgagacgatgcgcttcctctggctctcgggctgccgggtgagcatcgcc
ggctgcgacgagctgtccaagaagctgccatggctcaacgtggagctcgtcaaggagagc
acggaggacgaatatacggtggatatgctgtacgtctaccgtacggtgatggcgagcgcg
aggagcgaccgcccgcccagcgtcattgggctgcgcggcggggagtacttttggcggtgg
gtgcgcggcgccgcggtgggcacgtccaattcgagcatctag |