Selaginella moellendorffii: SELMODRAFT_439841
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Entry
SELMODRAFT_439841 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
smo
Selaginella moellendorffii
Pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_439841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_439841
Spliceosome [BR:
smo03041
]
Complex A
U1 snRNP components
U1 related factors
SELMODRAFT_439841
Complex B
SELMODRAFT_439841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
9635348
NCBI-ProteinID:
XP_002966973
JGI:
439841
UniProt:
D8R7Q1
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MSNVPPPMSSQAAYPPPMQMRPNQASGPFAQPQRPPQGPPGMYGSAVPFPQQGNAYPGSY
QVGNPGQLLQSYPVNAGQTNNGMAQGLHSGVPPPGSRASEWQEHFSPDGRRYYYNKRTKQ
SSWEKPDELMTPTERADASTVWKEFVTADSRKYYYNKLTRQSTWTMPEEMRVAREQADRG
YMGVAKMETAPAPVAQTLTPAATGIPSPAPLAGSGADAAESTEETQQTQQDLEVGISEGK
SFSTEEPLISYATKNEAKSAFKELLEAMHVQSDWTWDQAMRVIINDKRYGALKSLGERKQ
AFNEYLAQRKKLDLEEKRLKQKKAREDFIKMLEESKELTSAMRWSKVVSLFESDPRFHAV
DKEREREDLFDDYLLDLERKERDKAREEKKKSRADFRSYLESCDFIKVNSHWRKIQDKLD
DDERWSRLDKMDRLEVFQEYIRDLEKEEEEEKKMQKEQIRRKERKNRDEFRSLLEFHKAA
GILVARCPWRDYLAKIKEHPAYQAICTNLSGSTPKELFMDVLEELDKLYLEDKAKIKDIM
KVGKITVVPTTTYDDFKAALAEAGDLTAISELHIKLAFEDALERLKEKEEKEAKKRRRLA
EEFSTLLRSNKTITATSNWEESKPLLQETVEFRAIDDEVVLRKLFDEHVAHLQQKLKEKD
RKREKEEKKDKDKDSKDDKDKERKKDKSSKKDRNEDGEPALSKEEKKKDKDRDRDKEKRH
RRRHRSASSDDGSDRDDRDEARKSRKHGHEHRRSSRRHGHDSDSDTEAKPKRQKRERRST
EELEDGEILGLHSWSCLFVDRLRGSGFWY
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtcccgccccccatgtcttcgcaagctgcctatcctcccccaatgcaaatg
cgtcccaatcaggcctcaggtcctttcgctcagccacagagacctcctcaaggacctcct
ggaatgtatggatctgccgttccctttcctcaacaaggcaatgcgtatccaggctcttat
caggtcgggaatccgggtcagcttcttcagtcttatccagtaaacgcaggacaaactaac
aatggtatggcacaaggtctgcattcgggcgtaccacctccaggatcacgagcttctgaa
tggcaggagcatttttctcctgacgggagaaggtattattacaataagcggactaagcag
tcgagctgggaaaagccagacgagttgatgactccgaccgagcgagctgatgcttcaact
gtttggaaagagttcgtgactgctgatagcagaaaatattattacaacaagttgacgagg
cagtctacatggacaatgccggaggaaatgagagtagctcgcgagcaggcggatagggga
tatatgggagtcgctaagatggaaactgctcccgctcctgtagctcagaccctcacccct
gccgctacaggaatcccgtctccagcgcctcttgcagggtctggcgctgacgctgctgag
tctaccgaggagacacaacagacacaacaggatctggaggtaggcatttcagagggaaag
tcattttccacggaggagcctttgatttcttatgcgacaaaaaatgaggcaaaaagcgcc
tttaaagaacttttggaagccatgcacgttcaatccgattggacctgggatcaggctatg
cgcgtaattataaatgacaaacggtatggtgccttgaaatctttaggtgaacgcaagcaa
gctttcaacgagtatcttgcgcaaagaaaaaagttggatcttgaagaaaagcgtttaaaa
caaaagaaagcacgtgaagattttataaagatgttggaagaatccaaggagttgacatca
gccatgcgttggagcaaggtcgtatctctttttgaaagtgacccacgttttcatgccgtg
gataaagagcgagagcgtgaagatctttttgacgactatttgctggacctggagcgcaaa
gagcgagacaaggctcgggaggagaaaaagaaaagtcgcgcggacttcagaagttacctc
gagtcctgtgattttattaaggtaaattcccattggaggaaaattcaggataaactcgat
gacgacgagcgctggagccgattagataaaatggaccgcttagaagtctttcaggaatat
attcgtgatttggaaaaggaagaggaagaagaaaagaaaatgcaaaaggaacaaatacgc
cggaaagagcgtaagaatcgggacgagtttagaagtctcttggaatttcacaaagcagca
ggaatattggttgcaaggtgcccatggcgagactacttagctaagatcaaagagcatcct
gcttatcaggcaatatgtacgaatctgtcgggttcgacaccgaaggaactttttatggat
gtcctggaggagcttgacaagctgtatctcgaagacaaggccaagatcaaagacatcatg
aaggtcggaaagattacggtggtaccgacaaccacttacgacgatttcaaggctgcacta
gccgaggcaggtgacttgacggcgatatctgaactgcatataaagctagcttttgaagac
gctctcgaacgactaaaggagaaagaagaaaaggaggctaagaaacggcgacgcttagct
gaggagttctctactctactccgatcaaacaagacaataacggctacatctaactgggaa
gagtccaaaccgttgctacaggagacggtggagtttagggctattgatgacgaggtggtg
ctgagaaagcttttcgatgagcacgtagctcatttgcaacagaaactcaaggaaaaagat
cgcaagcgagagaaggaggaaaagaaggacaaagataaagacagtaaagacgacaaagat
aaggagcggaagaaagacaagagcagcaagaaggatcgtaacgaggatggtgaaccagcg
ctcagtaaagaagaaaagaagaaggacaaggacagggaccgtgacaaagaaaagaggcac
agaaggcgtcacaggagcgcaagcagcgacgatggatccgacagagatgacagggacgag
gctaggaaatcccggaagcatggacacgagcacagacgatcttcaaggaggcatggccac
gactctgattctgataccgaggccaagccgaaacggcaaaagcgggagcggcggagcacc
gaggaactggaggacggggagatcttgggcttgcattcgtggtcttgcctgtttgtcgat
aggcttcgtggttctggattctggtactga
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integrated database retrieval system