Selaginella moellendorffii: SELMODRAFT_440149
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Entry
SELMODRAFT_440149 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_440149
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
SELMODRAFT_440149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
9631055
NCBI-ProteinID:
XP_002967968
JGI:
440149
UniProt:
D8R8X2
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All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MAMEGQAKESAAAAAEVDDKQLQEIVRSWMLQALSGEDIDRYRKLLSDLKNVDFDDPESV
SGLAARIRALSQCVSIINERDHEMLLSLVFSMSFWSGSNELLDAIENLVVNLATSSGVLV
PRCLDMLVRNFLPPSCGIKVHLDCYTQDRLARKKMTFESLKGLKPLHLSMKSDVVNRVHL
ALQRILELVPIAALRLHPIVQQRMPHRRVDKDWNSLFLENMLLLDSKRVSPAISSRMLLG
IVDRLIEIDVEIAWEDILKDEDSSKVLVFHMDVDESDDKQAAPGSEAQLEHALAAHSGKK
PLDEIADKMDHLMELVFEHLHQCAKNERLDEVYTTLMVSFKSTVLDTYKSKFTQFLIFYL
CSLSPSSCGVNFAGFLCETFVTRSIPSNTRMSAAAYLASYLARANFLPLPVVLSSVSRLV
NWCVSFTPTRFDVFKLTDTALHGVFYAACQAVMYILCFRLRELHADSTQRPLLKGLRLQQ
LIEHKLCPLKVCLPSVVEEFVRQATAIQLISYSGTVEPSSGFEVLSFKSYGGDNRLEMFF
PFDPYLLRRSDRFIEPIFTHWSAAHSANEVEEQSSDEEEPVVEEEEVLDPDDLMEAEEEG
YEHHDGGEEAFRNSLECMSITPPRMLPANLAQMLPMS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaagggcaagcgaaagagtcggctgcggcggctgcggaagtggacgataag
cagctccaagagattgtgcggtcgtggatgttgcaagcgttgtctggggaggacatcgat
cgctaccggaaattgctctcggacttgaaaaacgtcgacttcgatgatccagaaagcgtc
tctggcttggcggcaagaatacgagcgctctcccaatgtgtaagcattatcaacgagcgg
gatcacgagatgctgctatcgcttgtgttttctatgagcttctggagtggcagcaatgag
cttctggatgcaattgagaaccttgtcgtgaatttggcgacttctagcggtgttttggtg
cccagatgcttggacatgctagtgcggaactttttgcctccctcatgtggtatcaaggtg
catcttgactgttatacacaagacaggcttgctagaaaaaagatgacttttgaaagtctt
aaaggactaaaaccgctacatttgtccatgaaaagtgacgtcgtgaatcgtgtgcatcta
gctctacaacgaattttggagttggtcccaattgccgctctgaggcttcatccgatcgtc
cagcaaagaatgcctcatcgaagggttgacaaagattggaattctttgttcctggagaat
atgttacttttagatagcaagcgcgttagtccagctataagcagccggatgctgttgggg
atagtcgacaggctgatcgagatagatgtagagatagcttgggaggacattttgaaggat
gaggatagtagcaaagttttggtcttccatatggatgttgatgaatccgatgacaaacaa
gcggctcccggtagtgaggctcaattggagcatgcgttagcagcgcattcagggaagaag
cctttagatgaaatagcagacaagatggaccatttgatggaactggtgtttgagcacttg
catcaatgtgcgaaaaatgaaaggctcgacgaggtgtatacaacactaatggtttctttc
aagtcgactgtccttgacacctacaagtcaaagtttacgcagttcttgatcttctatctg
tgctcgttatctccttcaagttgcggggtgaacttcgctgggtttctttgcgagacattt
gtgactcggtctattcctagcaacacaaggatgtctgctgccgcataccttgcgagctac
cttgccagggcaaacttcttacctttgcctgtggtgctttcatccgtttcaaggctagta
aactggtgtgtcagctttactcctacaaggttcgacgtgttcaaattgacagacacagcc
cttcatggagtcttctatgctgcttgtcaggcagtaatgtacattctctgcttcagattg
agggagcttcatgcggattctacgcaaagacccttgctgaaaggcttgagattgcaacag
ctgatagagcacaagctttgccctcttaaggtgtgtcttccctccgtcgtcgaggagttt
gtcaggcaagcgacggcaattcagcttatcagctacagcggcactgtagagcctagctcc
ggattcgaggtcttgtcattcaaatcctatggaggtgacaacaggctagagatgttcttc
ccatttgatccttacttgctgagacgatcggacagatttatcgagccaatcttcacgcac
tggtctgcggctcactcggcaaacgaagtcgaggaacagagcagcgacgaggaggagcct
gttgtggaggaggaagaggtgttagatccggatgatctgatggaggccgaagaggaaggc
tacgagcaccatgatggtggcgaggaagcgttccggaattctttggagtgcatgtccatc
acgccgcctcggatgctaccggcgaatttggcacagatgcttccaatgtcttga
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