Selaginella moellendorffii: SELMODRAFT_440592
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Entry
SELMODRAFT_440592 CDS
T01496
Symbol
PFT1A-1
Name
(RefSeq) hypothetical protein
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_440592 (PFT1A-1)
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
SELMODRAFT_440592 (PFT1A-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
9651209
NCBI-ProteinID:
XP_002969081
JGI:
440592
UniProt:
D8RCU1
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MATSSSAGPPSSGSGVTAQQPQAQYLVLAVEATAALGPSWPLLRSEYLDKIARAFYGQDG
NVQKDNGATLEMALVVFRGHDSYSGCLLQRSGWTPSLELFQLWLSSIDFSGGGFGEVAVA
EGLAEALVMCCPTTQPPSNQACQRHCILVAASNPHRLQTPVPHPPLSTGADAKPDHWWLA
DAEAVARAFSQCHISLSVVCPRQLPSLKNLYSVAKQNPRASDPSNEIAKHTQHLVLISES
FLEARNCLRRVTQAPALAAAVSMPPSPTSVKVEQQAAAPLTVQTTQPVPATAVPSVSTGT
VPTTSGRQSQIMSNGNIPTSTVKIEHVSTSGPLSYGSPPMANTSMAAVSLPIQSSGATSA
MSQEVLRPPLGSDSSTAVQDFKSINTNTLQSHRPVPAASVLNQIRQGAGSAAVSSILSAG
SLAVGQAGMGITQPVSQPASLAHGLSGDAGSASLGPVQGNANTSSILPSNAPAGMMQPAS
MPSGLPPVASTVGMAQSLQAANPLVVGGQSVQGAGLGMPHSSIAAPSNSVGSAPNAGVLL
PMSQPGQNPATGNAGVSHLVSNGVATTPPQQPANTKYTKLWQGTLAGQRHGKPVPICSLE
GYRQISSPETLAADWPLTMQIVRLIPQDYMSNREYQGKAELLVFRPLNQHGFLQQLADKK
LCAVIQLPSQTLLLASADKPQRMIGMLFPGDTVVFKPQGQNPQPGAPNFSHGGFPPTAQQ
SKPPQMMPGGSQMPMAGSGGTQIPGQNVHASVMVAITNSISIAAIPLLTSAGRIPKRAIY
LAMIIVVLTTSLSLCLEAKLTADVGVSRDFGCVDWSLASREAIKQRSLVPLASHGPTGGA
RPPQEHQLPRQLRSRSMPRGALLADLQTFERKASSVGAARGYTQAAGRSPISPAFGLSAD
NFLLYEVVTTNGELAAANECRDPFWALGGVVVAATLKTHPELPLGHRQERAELPGWATSS
DLSRYSTFQRSLEPLRRGLTWSTLVDHFFFLRGELRRHLRWEPFSGFQADPARDPLELLL
SPLDELGRGCYRVSGMKLREISQVQTSC
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgagcagcagcgcggggcctcccagcagcggctctggcgtgaccgcgcagcag
ccgcaggcgcagtatctggtgctcgcggtcgaggcgacggcggcgctaggcccgtcgtgg
ccgctgctgcgatccgagtatctcgacaagatcgccagagcgttctatggtcaagatggg
aatgtccagaaggacaatggggctactctggagatggcgctcgtggtctttcgcggccat
gactcctacagtggctgcctgctccagagaagtggctggacgccgagcttggagctgttc
cagctatggctatcgtccatcgatttctcgggtggtggatttggcgaagttgctgtggcg
gagggattagcggaagctcttgtgatgtgctgtcccacgactcagccgccaagtaaccag
gcatgccagagacattgtattttggtggcagcttcaaatcctcacaggcttcaaactccc
gtccctcatccgcctctaagcactggcgcggatgcgaagccggaccattggtggcttgcg
gatgctgaagccgttgcaagggcattctctcagtgccatatatctctttcagttgtttgt
ccgcggcagttaccatcattaaagaacctgtactcagtggccaagcaaaatcctcgagct
tctgacccttcgaacgagattgccaagcacacgcagcaccttgtcttaatctccgagagc
tttttggaggccaggaattgcttgcgtcgtgtcactcaggctcctgcacttgctgctgct
gttagtatgccaccatcgcctacaagtgtaaaagttgagcagcaagctgctgctcctttg
acggtgcagactacacaaccagtacctgcaactgcggtgccatctgtatccaccggcaca
gtgcctacaacctctggaaggcaatcacagatcatgtcaaatggtaacatacccacgtca
actgtaaaaattgagcacgtctcgacctctggtccgctctcatatggctcgccgcctatg
gcgaacacaagtatggcggcggtttctcttccgatacaaagctcgggagccacgtcagct
atgagtcaagaagttcttcgtcccccactcggctcagactcatcgactgctgttcaggac
tttaagagcatcaacactaatactttgcaatcgcatcgtccggttcctgctgcgagcgtg
ctgaatcaaatcaggcagggagcaggctcagcagcggtatcaagcattctctctgctgga
tctttagcagtgggacaagctggtatggggatcacacaaccagttagtcagccagccagc
ctggcacacggacttagtggcgatgcaggtagtgcaagcctgggaccagtacaaggaaac
gcaaatactagcagcattctgccgtcgaatgctcctgcggggatgatgcaaccagctagt
atgccaagtggcttacctccggtggcgagcacggttggaatggcccagagtttgcaagct
gcaaatcctctcgtggttggcggccagagcgtccagggtgccggacttggaatgccgcat
agctcgatagcagcaccgagcaactctgttgggagcgctccgaatgctggtgtgctgctt
ccgatgtctcagcctggtcagaatccagcaactggcaacgctggagtatctcatctagtc
tcgaatggtgttgcgactacaccaccgcagcagcctgcgaatacaaagtacacgaagctc
tggcaggggacattggcaggccagaggcatggaaagccggttccaatctgtagcttggag
ggataccggcaaatctcgtctcctgaaacgttggctgccgattggccgctgacaatgcag
atagtgcgtttaattccacaggactacatgagcaacagggagtaccaaggaaaggccgag
cttctagttttcaggccactaaaccagcatggattcctccagcagctcgcagataaaaaa
ctgtgtgctgtcattcagctcccctcgcagacgttgctgcttgccagcgctgataaacca
cagcgaatgattggaatgctgtttccaggggatacggtggtgttcaagccacagggtcaa
aatccacagcctggtgcaccaaatttctcgcacggcggatttccgccaaccgcgcaacag
agcaaacctccgcagatgatgccgggtggatctcaaatgcccatggccggctctggtggc
acacaaattccaggacaaaatgtccacgcttctgttatggtggcgatcactaactccatc
tcgattgccgctataccgctgttgacaagtgctggccggatccccaagcgtgcaatctac
cttgccatgatcatagtcgtgctgaccacgagcctcagcttgtgcctggaggcgaagctc
acggcggacgtgggagtgagtcgtgattttggctgcgtagattggagcctcgcgagcagg
gaggcgatcaagcagcgctcgctggttccgcttgcttcccatgggcctacgggcggagca
cggccacctcaagaacatcagcttccacgacagcttcgttccagatcgatgcctcgagga
gctctactcgcagaccttcagaccttcgagcggaaggcctcctccgtgggagctgctaga
ggatacacccaagccgcggggcgcagcccaatctctccggctttcggcctctcggcggac
aactttctcttgtacgaggtggtgacgaccaacggagagctcgcggccgcgaacgagtgc
cgggatcccttctgggcactcggaggagtggtggtggcggcgacgctcaagacccatccc
gagcttcctctcggtcaccgccaagaacgagccgagcttcctggttgggccacttcttcc
gatctctcgcgctacagtaccttccagaggtcgctggagccactccgccggggcttgacc
tggtcaactctcgttgaccacttttttttccttcgaggagagctgcgtcgacatcttcgt
tgggagcctttctccggtttccaggctgatcccgcgagagacccactggagctgctcttg
tcgcctctcgacgagctgggccgaggatgttacagggtgtccgggatgaagctgcgagag
atctcacaagtgcaaacaagctgctag
DBGET
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