Selaginella moellendorffii: SELMODRAFT_440658
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Entry
SELMODRAFT_440658 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K23288
syndetin
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_440658
Membrane trafficking [BR:
smo04131
]
Protein recycling
Others
EARP complex
SELMODRAFT_440658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
KxDL
Motif
Other DBs
NCBI-GeneID:
9659165
NCBI-ProteinID:
XP_002969167
JGI:
440658
UniProt:
D8RDB2
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MDFKNIGEKFLQSVKAGRARSFILSSSSDRPEIPARAAAAAAIAKSIAATPPHDRLSIAS
TSGETPSDFDPVRYLLEHLPEQPTQEFFENKVSQRMLQLDDITEKLSIQVMEHHEEMVKG
MQMVTEVEKDLQVSKIICKNGRRRLSLAMHEVSQDLVVAGNVRKKQVLMDMLPILERIQH
AIDIKSRLDSTIEEGNYGKALQMCSECLQLLEEMSGLAAVQDMNHSIEEWLQKTIVKVDE
VLLDVCRQFNVEKYMTVIDAYAMIDDVPGLSDKTQTFYAQIIVARTHSVLKEYLPQVYLP
TTLCMPYLMFLVQTDELQAAQRRGRLPYNDLCLRLPDTSYRPCLFKTLELLYDILCSYFR
MMACDWKLQTSAVSNGALHRSRSQGSLSQPVQAAHRHSSSLESGTKDDSVSGRMQNGPAL
TENMLDSRNRLRMEVARAVGKGLEKGRKTVWELAARRVSALLSSDAFCAASAHHFLLNLD
LLNKFILAGEAFSGAEAIPLRAKLVKQSEKYFGAFHRQNLEVLRMMLEKEPWQRVPSGFL
KSLNLAGLTGNGAPIVASTTSESMMLKPGEKLEVQQGFTEWLRKGNPFTESRIADVSSGK
VDGSPHGKMPSNVTPKEEEEENEDLLADFIDEDSQRPGRLETKSNAGDDERITLTSSSIN
MLRSIDRYARLMQILEPISLEVFKGLSQVFELYFFIVFKTFGQRDLFSGRAPSDSPVISG
RLRGALVRISQQLEEQRLKYAAGHPQPMNAGVFEMSSQGFGAGMVSPSNFFAIKERTVAA
ESLIFLATLIRNSRQHLQSLLHQNALPFVDQFFARTVDASIDLREHVYKTGARLLLNIGS
YFDRISNTRWELKELGMEHNGYVDSLLGEFKQYTVRLSNAGVSRQVHELLLQYGVDILAE
TLVEGLSRVRRCNNEGRAVMSLDLQVLINGLQHLAPAKLKANLQIVDAYIKAFYLPETEF
LYWAKSHPEYSKQQIINLINLVASMNNWKRKTRTDLLERIESGDL
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaagaatatcggggagaagttcctccagtctgtgaaagctggacgagctcgg
agttttatactgtcttcctcttcggacaggcccgagatcccggccagggctgcggctgct
gcggctattgccaagagcatcgctgctacccctcctcatgatcgtctttcgatcgcatca
acctctggagagacgccctcggacttcgatccggtgagatatcttctggagcacttaccc
gagcaaccaactcaagagtttttcgaaaacaaggtatctcaaaggatgttgcagcttgat
gatataacggagaaactttcaattcaggttatggaacatcacgaagaaatggtgaaagga
atgcaaatggtcactgaagtggagaaagatctacaagtctcaaaaatcatatgtaagaat
ggtcgcaggcgtttgtctcttgcaatgcatgaagtctctcaagaccttgtagtcgctgga
aacgttcggaagaaacaggttctaatggatatgcttcctattctagaaagaatacaacat
gcaatagacatcaagtcccggctagacagcaccattgaggaaggcaattacggcaaagcg
ctacaaatgtgctcagagtgcttacaacttcttgaagaaatgtcggggcttgcagctgtg
caggacatgaatcatagtatcgaggaatggctgcaaaaaactattgtaaaggtcgatgaa
gttctacttgatgtttgtagacagttcaacgttgaaaaatatatgacggttattgacgca
tatgccatgatagacgatgttccaggactctctgataagacacaaactttttatgctcag
atcattgtagcaaggacacattcggtcctgaaggagtatctacctcaggtttatttgcct
acgacattatgtatgccttatttgatgttccttgtacagacggacgaattacaagcagct
cagagaaggggaagattaccatataatgatctatgcttgagattgccagacactagttac
cgtccctgccttttcaaaactctggaactactctacgatatactatgctcttatttccga
atgatggcgtgcgattggaaacttcagacatcagctgtatccaacggtgcccttcaccgg
agccgtagccaaggaagcttgagtcagcctgttcaagcagcgcaccgtcatagctcgtcc
ctggagtcaggaacaaaagacgattctgtcagtggaaggatgcaaaatggaccagcatta
actgaaaatatgctggattctagaaacaggctgcggatggaggtggcacgagcggttggg
aaagggctagaaaaggggaggaagactgtctgggagcttgctgcgcgaagagtatctgca
cttctgtcttctgatgcgttctgtgcagctagtgctcatcatttcttactgaaccttgat
ctgctcaacaagtttattcttgctggcgaagccttcagtggtgccgaagccatacctttg
cgagctaaactggtgaagcagagcgaaaaatattttggagcttttcatcgacaaaacctc
gaggtcttacgtatgatgctagaaaaggaaccatggcaaagggttccctccggttttctc
aagtcactaaatctagccggacttacaggaaatggtgcaccgatagttgcgtcaaccacg
tctgagtccatgatgctaaagcctggtgaaaagttggaggtgcagcagggattcaccgag
tggttaaggaaagggaatccatttactgagtcgagaattgcagacgtgagctcgggaaaa
gtagacggttctccccacggaaaaatgccgagcaatgtgacccctaaagaagaagaagaa
gaaaacgaggatcttctggcggattttattgacgaggacagtcaacgtcccggtcggctg
gaaaccaaatccaatgctggtgatgatgagcgaataacattaaccagctcgtcgataaac
atgctcaggtccattgatagatatgcaaggctcatgcaaatattggagcctatcagtctg
gaagttttcaagggccttagccaagtgtttgagctctacttttttattgttttcaaaaca
ttcggacaacgtgatttgttcagtgggagagcgccttctgactctcctgtaatttccggt
cgtctcagaggagcgttggttagaatctctcagcagctggaagagcaaaggttgaaatat
gctgctgggcatcctcaacccatgaatgctggagtttttgagatgtcgtcacaaggattc
ggcgcaggcatggtttctcccagcaattttttcgccattaaggagcgtacggttgcggcg
gaatcgctcatttttcttgccacgcttataagaaattctcgtcagcatcttcaatcgcta
ctgcatcaaaatgctctaccatttgtagaccagttttttgccagaacggtcgatgcatcc
atagacttgagagagcacgtatacaagacaggtgctcgtcttttgctaaatataggatca
tatttcgatcgtatatccaatacaagatgggagcttaaagagcttggcatggagcacaac
ggatatgtagattcacttcttggcgaattcaagcagtatactgtgcgcttgtcaaacgcc
ggcgtctccagacaggtccatgaacttctcctgcaatacggagtggatatattggcggag
acactcgtggaaggcctttcgagagtaaggaggtgtaataacgagggacgtgcggtcatg
tctctggaccttcaggttctaataaacggcttgcaacatcttgctcccgcgaaactgaaa
gcaaacctccagattgtggacgcttacataaaggcattctatcttcccgaaacagaattc
ttgtactgggctaaatctcatccggagtactccaagcaacaaatcatcaacctcatcaac
ctggtagcgtccatgaacaactggaagcgtaaaacaaggacggacttgctggaaaggatc
gaaagcggcgatttgtaa
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