Selaginella moellendorffii: SELMODRAFT_440815
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Entry
SELMODRAFT_440815 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_440815
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_440815
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
SELMODRAFT_440815
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
SELMODRAFT_440815
SLIK complex
SELMODRAFT_440815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo
SWI2_SNF2
CHDCT2
Motif
Other DBs
NCBI-GeneID:
9659750
NCBI-ProteinID:
XP_002969372
JGI:
440815
UniProt:
D8REK3
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
MMSEYEEADESNENEDSFVGQQEHFSSRPRKSRYEPSDGDDASQSDHGDPEYKEDSGDEN
YEDGGYENGAASFRYSTVESRDFQLEPEESEEYVMEEEEEDDNGGDDPQDADFDPVSPEN
NFSQQEEDDDDDYNASAEEQEEAASTGGFDVSSDEELVRPANPRKRPAIKIAQPRFGSNN
QKRHRIVQKKDYPSDEEDSSDGEDQRNHRKVVVASSIRPVVIAPSQRAPADFSSRETRSR
RSIPRKSYVEEESEEDEEDQKAKKKVSPDEIEEEDSDKIERVVWHQPKGIAEAEMLEGRK
AEPFILDTDPHADLDWEEQEFYIKWKGQSYLHCQWQGLADLHQLSGYKKVVNYMKKVEED
RQKRRNLSGEEAEVHDLSKEMELDLLKQYTQVFVTTIPVEKDIDLAFAQDFIDEYKERES
ASNFQGKSVDFQRKRGKLILRKLEEQPEWLKGGKLRDYQLEGLNFLVNGWRMNTNVILAD
EMGLGKTVQSLSMLGYLQYNLEILGPFLVVVPLSTIANWAKEFRKWLPNMNVLVYVGNVA
SREMCQKYEFFTASGRAKFNTLITTYELVLKDKDVLSQFKWDFLMVDEAHRLKNNEAALY
TELMKFSAKNKVLVTGTPLQNNVEELWALLHFLDPIKFRNKDDYKNLVSFNEAELARLHA
ELRPHLLRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFSDLNKGVRGNQVSL
LNIVVELKKCCNHPFLFESADHGYGANATMTDNSRVQRVVLSSGKLVLLDKLLVRLKETG
HRVLIFSQMVKMLDILADYLRLRGFQFQRLDGSTKHHLRQQAMEHFNAPGSEDFCFLLST
RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQEFVVNIYRFVTCRSVEEDILE
RAKKKMVLDHLVIQKLNAQGRLEMKETKKATTMFDKNELAAILKFGAEELFKEEKKSEEE
AKSKLENMDIDEILERAEKVSGDTEQPGGELLGAFKVANFSQGEDDAAFWSRLIPAETAK
EAPDLGPRAARKIRTYAEDLPADRYSKRRKNAEEVGRKRSTRLSRAPEPPPRVDGASAHV
YEWEGTTISKRDANAFVKGVKKFGDKSRIDMIVVNTGSAIENASEDSQLDLMDALLDGCT
EAVDNSHNPKAAILDFFGVTVKAQEVLTRVKELTLLGKRIRRYQDPVSQFRLRSHSKNPS
SMWSRWSQVDDARLLLGVYYHGYGNWEKIRTDERLLLGKKMAPGGATAGETSLPRATHLD
ARVNTLLRKETELDKGSNGETSKSRSKRNQESSSKLRQGKDRASNSSRPSGTRKSARNIN
RENAAIAAAAREEAEDKEEGEISDDESTQRRPKGVTDEKERDQRWHNWCEGVMKGEVRTL
KRLQNLKSAHSESNEKVVVRVKKYLQKLGQKIDSILDDNKGEKCNPQKMAMRLWNYVARF
SDLSGPDLSDLYHKLKRQPEAAAPSAASVENNNENNGTSREKHEPLTYKRRHGRKDNAES
SKRRRKGGDEEETGARNSSADKAHYFYGKGTSRKDHLDRAGEED
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagagtatgaagaggccgacgaatccaatgagaatgaggatagttttgtagga
caacaagagcatttctccagtaggccgaggaaatctaggtacgagccttcagacggcgac
gacgcgagccaatctgatcatggagatccagagtacaaagaggattcgggtgatgagaat
tacgaagatggtggatacgagaatggagctgcttcgtttaggtattctactgtagagtcc
cgggattttcagctcgagcccgaggagtctgaagaatatgtgatggaggaagaggaagaa
gacgataatggaggtgacgaccctcaagacgctgattttgatcctgtgtcaccagagaac
aatttctcgcaacaggaagaggacgatgacgacgactacaacgcaagtgctgaggagcag
gaagaagccgccagcactggaggttttgacgtatccagtgacgaggagcttgttcggcct
gcgaatcccagaaagcggcctgcgatcaagattgcgcaacctcgattcgggtcaaataac
cagaaacggcatagaattgtgcagaagaaagactatccgtcggatgaagaagactcttct
gacggtgaagaccagcgtaatcatcgtaaggttgttgttgcaagctccatcagacctgtt
gtcatcgccccaagtcaacgagcaccagcagacttttcctccagggaaacgagaagcaga
agatcgattcctaggaaatcttacgtggaggaggaaagcgaagaggatgaagaagatcaa
aaagcaaagaaaaaggtatccccggatgagattgaagaagaagacagtgacaaaatagaa
agggtagtgtggcaccagcccaagggtatcgcggaagcagaaatgttagaaggcaggaaa
gcagaaccgttcatcctcgatacagatcctcatgctgatttagattgggaagaacaagag
ttttacatcaaatggaagggacaatcctaccttcattgtcaatggcaaggtcttgctgat
ctccaccagctaagtggatacaagaaggtcgttaactacatgaaaaaagttgaagaagat
cggcagaagagaagaaacttgagtggagaagaggccgaggtgcatgatttgagcaaggag
atggaattggatctcttgaagcagtatacccaggtgtttgttactactatccctgtggaa
aaggacattgatctcgcatttgctcaagattttatcgacgagtataaggagagagaaagt
gcatctaattttcagggaaaatctgtcgattttcaacggaagagaggcaaattgatctta
agaaagcttgaggagcagccagagtggttgaaaggtggaaaactacgtgattaccagcta
gaaggtttaaactttctagtgaatggttggcgtatgaatacaaatgttattcttgccgat
gaaatgggtctaggaaagaccgtacagtcgttatcgatgctgggatacctgcagtataac
ctggaaatcttaggaccttttttagtggtcgtacctctttccacaatcgctaactgggcc
aaagagtttcgaaaatggttgcccaacatgaatgtgctggtgtatgttggcaatgtggcc
agtcgtgagatgtgtcaaaaatacgagttcttcactgcatcgggacgagctaaattcaac
actttgatcacgacgtacgaacttgtattgaaggataaagacgtcctatctcagttcaag
tgggactttctgatggtggatgaagctcatcgtttgaaaaacaacgaggcagcgttgtat
actgagctcatgaaatttagtgcaaagaacaaagttcttgtgactggaacgcctttacaa
aataatgtcgaggagctctgggcgcttttacattttcttgatcctataaaatttagaaac
aaagacgattataaaaatctggtgtcatttaacgaagctgagctagcgaggctgcatgcc
gagttgcggccacatttgttgagaagggtgataaaggacgtggagaaatctttgcctcct
aaaatcgagcgtattcttagagtggagatgtctccacttcaaaaacagtattacaaatgg
attttggagcgtaatttcagtgatctgaacaaaggcgttcgtgggaatcaggtgtctctc
ctgaacatagttgtggaattaaagaagtgctgcaaccatccctttctttttgagagtgcg
gatcatggttacggagcaaatgcaactatgaccgacaatagtagagtgcaaagggttgtt
ctcagcagcggcaagctggttttactcgataagcttcttgtccgtttgaaggaaacgggc
cacagggttctgattttctctcagatggtgaaaatgctggatattttagcggactattta
cgtctgagaggctttcaatttcaaaggctggatggcagcacaaagcaccacttacgtcag
caggctatggaacacttcaatgcccctggaagtgaagatttttgtttcctactttcaaca
agagcggggggccttggaatcaatcttgctactgcagacactgtgattatctttgattct
gattggaatccacagaatgaccttcaagcaatgagtcgggctcatcgtattgggcaagag
tttgtcgtcaacatttatcgcttcgtgacatgtagaagtgtcgaggaagacattttggaa
cgcgcaaaaaagaaaatggttcttgatcatctagtcatacagaagctgaatgcgcaagga
cggctggaaatgaaggagaccaagaaagctacaacgatgtttgacaagaacgagcttgca
gcaattcttaagtttggggcggaagagctcttcaaggaagaaaagaagagcgaagaggag
gccaagagcaagctggaaaacatggacattgatgaaatacttgagagagcagagaaagtg
agcggcgataccgagcaaccgggtggcgagcttcttggtgctttcaaggtagcaaatttc
agtcagggagaagatgatgcagcattctggagccgtctgattcccgctgagactgcaaag
gaagctccagatttgggacctcgtgcagcaagaaaaatacgaacttacgccgaagatctt
cccgctgataggtacagcaagagaagaaagaacgctgaagaagttggccgtaagcggtct
acaaggctgtcaagagccccggaacctcctccacgcgtggatggtgcttcagcccatgtt
tacgagtgggagggtactactatttcaaaaagggacgcgaacgcgtttgttaaaggcgtt
aaaaaatttggtgacaagagccggatagatatgattgttgttaacacgggatcagctatt
gaaaatgcgtctgaagattctcaactggatctcatggacgctcttttggatggttgcacc
gaagctgtggacaacagccataacccgaaggctgctattttggatttttttggagttaca
gttaaagctcaggaggttcttactcgagtcaaggagcttactttacttggaaaacgcatc
aggcgataccaagaccctgtttctcagtttcgtttgcgttcgcattccaaaaatccatct
tcaatgtggtcgagatggtctcaagtcgacgacgccaggcttttacttggggtttactac
catggctatggaaattgggagaaaattcgaacggatgagaggcttttactaggtaagaag
atggctccaggcggtgcgacggcgggagaaacttctctaccaagagcaacccatctggat
gctcgggttaatacacttctacgaaaggagacggaacttgacaagggatccaatggcgag
acctcgaagagccggtcgaagcgtaatcaagaaagctccagtaaactgcgacagggcaag
gaccgggccagcaacagcagccggccttcggggacacgaaagtcggcaaggaatatcaac
agagagaacgctgccatagcggctgctgcgagagaggaagcagaagacaaggaagaaggg
gagatctcagatgatgaaagcacgcagcggcgaccaaagggtgtcaccgacgagaaggaa
agggaccaaagatggcataactggtgcgagggtgtcatgaaaggcgaggtgaggacgctc
aaacgtctccagaatttgaagtccgctcactccgagtccaacgagaaggtggtagtaaga
gtgaagaagtacctacaaaagctcggtcagaagattgacagcatcttggacgacaacaag
ggggagaaatgcaatcctcaaaaaatggccatgaggttgtggaactacgtcgcgaggttt
tcagacctctccggtcccgatctctccgacttgtaccacaagctcaaacgtcagccggaa
gcagccgcgccctccgccgcgagcgtcgagaacaacaacgaaaacaacggtacgtcgagg
gagaaacacgagcctcttacgtacaagaggcggcacgggcggaaggacaacgcagagtcg
tccaagaggcggaggaaaggaggggacgaggaggaaacaggtgctaggaacagctcggcg
gacaaggcacactacttctacggcaaagggacttctcgcaaggaccatcttgatcgagca
ggggaagaggattag
DBGET
integrated database retrieval system