Selaginella moellendorffii: SELMODRAFT_441095
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Entry
SELMODRAFT_441095 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10779
transcriptional regulator ATRX
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smo03000
]
SELMODRAFT_441095
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_441095
Transcription factors [BR:
smo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
SELMODRAFT_441095
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_441095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SMP
Helicase_C
ADD_ATRX
HDA2-3
Motif
Other DBs
NCBI-GeneID:
9646596
NCBI-ProteinID:
XP_002970215
JGI:
441095
UniProt:
D8RGF0
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MGDPELQVKFNAGLAAARRVAALIVGQPFCASDCIKAENPLDDMKISLRSVREVPSIGER
SENGLLVEEQGKVCEEDECQEEKVSPQAHVKEEIRCEEQVDGNSCEIIRVDADQEKSCEL
VEKEDKACEVQREEGDGGVEKNSSEDEYDGDGYMSESSSEGSKSDEEVTRMIDWLVEIES
ESADAQEHLEDESVKKVEEEVRLELSETLSGQELDMAVSCEMADYVSIWKKTLLELEEES
AKLQDRLEDAGVSLPDLFKAIEKQAAEGCMTDTWRNRAHWAGTQAPEDFAEVLHSAEKDL
DALRPVIRRRGKLVEEGASGFLERKVNDVDTVKGSTGWEAFDSAFQPKLSAVSLFESKKW
AAVYSASTPEQAARLGLKFPGVDKVDDIADIDQHVGMEAAALAEESEFGLTEHQKKTMKR
VREEDDVRQMQKKIGARRVRAMASQVKSSTSDVNIITEPPAVLSKLQPDTIDLGTAGDPQ
NTDELRLEEEQRQSHERQTGTDQAVADNVTTRNQPFINGTPSRSEEKVKKGVAPAREGTD
HIRNASSFGRPTTDGTEPMPVFMEQTVRDNGTQAEAVADGSQCHDEAVETEEFKVLKRSN
SFKAIGVRTSSAGFNDAKKPTPSVVIVVSDDDDDDPPADCGSTAQPRTVDQGKVPSKDVT
ALDETTSPLKPLKRVIEHGSSSRCKRKRCFMVNSSEDEEDATSAKKEQSGLKSDRDEQEE
RNSDSCDLSQSKLSGDTRRRLTRGSRSFGCTVCGEIMSAKDVLSHPVLKVIICTSCKQQY
DDGPFRKDEDGSEAECRWCGEGGSLICCDSCDKVFCESCIGRNFGPAFLESIEDISWRCY
LCDPSPLASLQQWLKVAEEEALKESLANLDVRRNRKRQRKNIRRVLRDDELDEVTKQKLA
LEKERRERLAEWYAEARKGKSLSGKAANSEKAVEGTDGDDHICEGDCKTEGCVINIASRQ
TGEPLVRIPASISKHLKPHQLCGVRFMWDNCIESVEKVKSGDVGLGCILAHSMGLGKTLQ
VIAFLYTVMRNVDLNFKTVLVVVPVNVLHNWKREFEKWRPAEVAPLEVSMLDTSRDNATR
ASLLKSWKEKGGVMLIGYAAFRNLSTGSHVKDKETRDTLCKCLQDPGADIVVCDEGHTIK
NDKADITIALQRVKSGRRIAMTGSPLQNNLMEYYCMVDFVRPGFLGPQAIFRNKVQNPIA
NGQHADSTPDDVKKMKRTVHILHKRLSGFVQRRDMTVLKDELPPKCVWVISVRLSPLQKQ
LYKKFLSLCETGRSKLFDHYHVLAKIWNHPDLLAIAKEQRLNEEFIVDSEKEDSAENGQG
CPKRASPEADSFEWCEEILKESKRDVLENSGKMVLIMTLLSLNSSRGEKTLVFSQSLHTL
DLIENFLDTIPLGGSQDVWNKGKEWLRLDGNTTASRRQQIADIFNDPNNTAIKCLLISTK
AGSLGTNMTGANRVIIVDGSWNPTHDLQALFRAWRYGQTKPVFVYRLLAYGTMEEKIYNR
QLTKEGIAARVLDAHQVGRHLNADDLELMYTLDDDDDEEGTQLAGTEQQQQPGAKGQKPK
HKTFFVPSDAPPRDDHMAMLLLDFRPQWIAQYHEHEPLLEDLEEEKLTPEEMKTAWDGYI
IEHELQNRQIPSQSPTNYPPQSQYPASSTDVRPPFTATPSKAACNDVYHASLLASLSIPV
GESSMGKSRNSRFQQAAAAAVAVAASPLTKVHITFFLVKLFATLTTTNLSFRRLSHGGGD
TYGDTRLYRKAEVIAMGIDDGATADANRPPPATIAGALNSASQSLVGSKPLEASDIQSAE
ARATGIPAGVKGGVGAAAQHAVDKGEPVTVGDVLRVSISLFVLFAAKTPIPKGGDKIVTQ
ADASRVQSAEQRNNPDSVVSPGGVAASMQSAADHNKAAGYA
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcccgagctccaggtgaagtttaatgccggcttggcggcggcgaggagagtg
gctgcgctgattgtagggcagccattttgcgcctcggattgcataaaggccgagaatcca
ctagatgatatgaagatttctttgaggtcagtcagagaagtccccagtatcggtgagaga
agtgagaatgggctgcttgtcgaggagcaagggaaagtttgcgaagaagatgaatgccaa
gaagagaaagtctcaccgcaagcacacgtcaaggaggaaatccggtgtgaagaacaagtc
gatggaaacagctgcgagatcatacgagtagatgcggatcaagaaaagagctgcgaactt
gtagagaaggaagacaaagcttgcgaagtccagcgggaagaaggagatggcggagttgaa
aaaaacagctcggaagacgagtacgatggcgatggatacatgtccgagagttccagtgag
ggctcaaagtctgacgaggaagtcacaaggatgatcgattggctggtggaaattgaaagt
gagtcagcggacgctcaagaacatttggaagacgaaagtgtaaagaaagtggaggaggaa
gtcaggctggagttgtctgaaacactctctggacaagaactggatatggcagtttcttgt
gaaatggcggactacgtttccatatggaaaaaaacgcttttggagcttgaagaggagagt
gcaaagcttcaggaccggcttgaagatgccggtgtgtctctaccggatttattcaaagct
attgaaaagcaggctgctgaagggtgtatgacggacacttggagaaaccgggctcactgg
gctggtactcaggcacctgaagattttgcggaagtgcttcattctgccgagaaagatttg
gatgctctgcggccggttataaggcgccgaggcaaacttgtagaggaaggtgcaagcggt
tttctggaaagaaaagtgaacgacgtcgatactgtaaagggctccactgggtgggaagct
tttgatagtgcattccagccaaaactgagcgcagttagcttgttcgagtcaaaaaaatgg
gctgcggtttactccgcctcgaccccggagcaagcagcgcgattgggcttaaagttccca
ggcgttgacaaggttgacgatattgcggacatagatcaacatgttgggatggaggcggcc
gctttggccgaagagagtgagttcggtcttacggagcatcaaaagaagactatgaagcgg
gttagagaagaggatgatgtgcggcagatgcagaagaaaattggtgccagacgtgtcagg
gcaatggcttcacaagtgaagtcatcaacaagtgacgttaatattataaccgagcctcct
gcagtactatccaaattgcagcccgataccattgatctggggactgcaggggacccgcag
aacacagatgaattgcgactcgaagaggagcaacgtcagagtcatgagcggcaaacaggg
acggaccaggcagtcgcggataacgtgacaactaggaaccagccatttattaatggaacg
ccgtcgcgcagcgaggaaaaagtgaagaaaggtgtggctccagccagggaaggaacggat
catatacgcaatgctagctcttttggacgcccaaccacagatggaacggagcctatgccc
gtcttcatggaacagaccgtcagagataatggaacacaggcagaggcagtcgcagatgga
agtcaatgccatgacgaagcagttgaaactgaagaattcaaggttcttaaaagaagtaac
agttttaaagccattggagtgaggacgagctcagcgggtttcaatgatgctaaaaagccg
actccttcggtggtcattgttgtcagcgatgatgatgacgacgatccacctgctgattgt
ggttcgactgcacaaccgagaacagtagaccaaggcaaggtgccaagtaaagacgtcact
gcgctggatgaaacgacttctccgttaaagcctttgaaacgagtgattgaacatggttct
tcatccagatgcaagagaaagcgttgtttcatggttaacagtagtgaagatgaggaagat
gcgacctcggccaagaaggaacaatcgggattgaaaagtgatcgtgatgagcaagaggaa
agaaactcagacagctgcgatttaagtcagagtaagctgtccggggataccaggagaagg
ttgacgagaggaagcaggagcttcgggtgcacagtatgcggcgagataatgtcggcaaaa
gacgtactgtcgcatcccgttctgaaagttataatttgcacctcctgtaagcaacagtat
gatgatggcccgtttcggaaggatgaagatggctcggaagcagaatgtagatggtgtggt
gaaggtggaagtctgatttgctgcgatagctgcgacaaggttttttgcgagtcttgcatt
gggaggaatttcggacctgcgtttttggaaagcatagaagacatatcctggaggtgctac
ctttgcgatccatctcctttagcaagtttgcagcagtggctgaaagtagcagaagaagaa
gccttaaaggaatcactagctaacttggacgtgaggcgtaatcgtaaaagacaacgaaag
aacattcgcagggtgctgagagatgacgaattggacgaggttacgaagcagaagttggca
cttgaaaaggaacgtcgagaacgcctagcagaatggtatgcagaagcaagaaaggggaag
tctctctctgggaaagccgccaactcagagaaggctgttgaagggacagacggagacgat
catatctgtgaaggtgattgcaaaactgaggggtgcgttatcaacattgctagcaggcaa
actggtgaaccactggttcggattcctgcaagtatatcgaagcatttaaagccacaccag
ctgtgtggagtccgatttatgtgggacaactgtattgagtctgtggagaaagtcaaatcc
ggggatgtaggtttgggctgcatacttgcccacagcatgggacttggaaaaacgctgcag
gttatcgctttcttgtacacggtaatgagaaacgtggacttgaacttcaaaaccgtgttg
gttgtggtgcccgtaaatgttttgcataattggaagcgtgaattcgagaagtggcggcct
gcagaagttgcgcctctggaagtgtcgatgctagatacttccagggataatgcaactaga
gcgagccttttgaaatcctggaaggaaaagggaggtgtcatgcttattggctatgcagca
tttcggaatctttcgacgggaagtcacgtgaaggacaaggaaacaagagatactctatgc
aagtgcctgcaggatcctggcgctgacatagttgtttgtgacgagggtcacaccattaaa
aatgacaaggcggacattaccatagcactccagcgagtgaaatctggccgccgaatagcc
atgacaggatctcctctacaaaacaatctgatggagtactattgtatggttgactttgtg
cggcctgggtttctgggtcctcaagcaatctttcgtaacaaggtccagaatccaatagca
aatggtcaacatgccgattctactccggacgatgtaaagaagatgaaacggacagtgcat
attctgcataaacgtctgagcggattcgtgcaacgacgggacatgactgtcttaaaagat
gaactccctccaaagtgcgtatgggtgatctctgtccgcctgtctcccttgcagaaacag
ctatacaaaaagtttttgagcttatgcgaaactgggaggagcaaactcttcgatcactac
catgttctagccaagatatggaaccacccggatttgctagctattgcaaaagagcaacga
ttgaacgaggagtttattgtagactcggaaaaagaagatagcgccgagaatggacaagga
tgtccaaagcgggcttcccctgaggctgatagtttcgaatggtgtgaagagattcttaaa
gagtcaaagcgggatgttttagaaaacagtggaaaaatggtcctaattatgacactgctc
tcactgaactcgtcgcgaggtgaaaagactctagtattcagccagagtttgcacacgctc
gatttgattgaaaatttcttggatacaattccacttggaggtagccaagatgtttggaac
aaagggaaagaatggctaaggctcgatggcaacacaactgcgagtcggaggcagcagata
gcggacattttcaacgatcctaacaacacagctattaagtgtcttctaatttctaccaag
gctggctcgctgggtactaatatgaccggcgctaaccgtgtcatcatagttgatgggtcc
tggaatcctactcacgatttacaagctctttttcgagcatggagatatgggcaaacgaag
cctgtgtttgtctatcgattgctggcgtacgggactatggaagagaaaatctacaatcgc
caattaacgaaggaaggcatcgctgcgagagtgcttgacgcccatcaagttggcaggcat
ttaaacgcagacgacctggagcttatgtatactttggatgacgatgacgacgaggaggga
actcaattggccggaaccgagcagcaacagcagcctggtgccaagggtcagaagcccaag
cacaaaacgttttttgtgccctctgacgcccctccacgagatgatcacatggcgatgctt
ctcttggactttaggccacagtggattgcgcagtatcacgaacacgagcccctgttagag
gacttggaggaggagaaactgacaccagaagagatgaagacggcttgggacgggtatata
attgaacacgagctgcagaatcgacagataccaagccaatccccgacgaactatccacca
cagtcgcaatatccagccagcagcaccgatgttcgtcctcctttcactgcgactccctcc
aaggcagcttgcaacgacgtttatcacgccagccttttggcatcactgtccattcccgtt
ggtgagagttcgatgggaaaatctcggaattcccgatttcaacaagcagcagcagcagca
gtagcagtagcagcatcaccacttacaaaagtacatataacattttttctcgtaaaactt
ttcgcgactttaactacaaccaacttaagttttcgacgcttgtcgcatggaggaggtgac
acgtatggtgacacgcgtttgtacaggaaagcggaggttatagcgatggggattgacgat
ggtgcaactgctgatgctaaccggccaccacccgctactattgcaggcgctttgaattcg
gcctctcagtcgttggtgggatccaagcctctcgaggccagtgacatacaaagcgcggaa
gctcgagccactggaattccggccggcgtgaaaggtggtgtcggagctgctgcgcagcat
gcagtggacaaaggcgagccggttacagtcggagacgtgcttcgtgtgagtatatctctt
tttgtgcttttcgctgcgaagacaccaattccaaagggtggtgacaagatcgtcacgcag
gctgatgcttcacgagttcagagcgccgagcagcgaaacaatcccgacagcgtcgtttct
ccgggtggtgtcgctgcgtcgatgcagtcagccgcggatcacaacaaggctgcaggatac
gcttga
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integrated database retrieval system
