KEGG   Selaginella moellendorffii: SELMODRAFT_441578
Entry
SELMODRAFT_441578 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14402  cleavage and polyadenylation specificity factor subunit 2
Organism
smo  Selaginella moellendorffii
Pathway
smo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    SELMODRAFT_441578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_441578
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     SELMODRAFT_441578
    U7-dependent histone pre-mRNA processing factors
     SELMODRAFT_441578
SSDB
Motif
Pfam: Lactamase_B_6 CPSF100_C Beta-Casp RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 RILP
Other DBs
NCBI-GeneID: 9639999
NCBI-ProteinID: XP_002971541
JGI: 441578
UniProt: D8RKS9
LinkDB
Position
Unknown
AA seq 721 aa
MGTSVQLTPLAGAHSEGPLCYLLQVDDFRFLLDCGWNDVFDVSLLQPLVSVAPTIDAVLL
SHSDTLHLGALPYAIAKLGLNATVYCTHPIRSMGHMQMYDHCLSRTAVSHFDLFSLDDVD
TAFSNTCPLKYSQHFPLQGKGQGITITPFPAARLLGGTIWKITKDTEDIIYAVDFNHRKE
RHLNATVLESFTRPAVLITDAYNALNSQPVRRQRDQEFLDIILRTLRSSGNVLLPVEPSG
RVLEIILYLDQHWSQHRINVPLVFLTYVVGSVTDFVKSSLEWMNDAIGKAFEQNRENPFA
LRSVKLCTSRKQLDELPPGPRVVLASMASLETGFAKELFLEWAVDPKNLVLFTERAQVGT
LARQLQVEPPPKIVKITISKKVLLVGEELEAYEREQSRLREEARNAASQQEPVQPASSSD
DLMPSAPDESSTPSEGKQQAVTVHHDIFIDGFTVPADTVAPMFPVYDDSNERDEYGEIIN
PDDFVIKEEFMDYSQTQANANNIKLETEGDTSAEKPSKVVTTDTAVVPLCALTFMDFEGR
ADGRSIKSILAHVAPLKLVLIHGSAESTEHLKQHCLKNVCPFVYTPRVGENMNVTSDLNA
YKLRLTERIMSSVLFRKLGDYELAWVDGEIGQNEEDLLPLLPLDGTPPPHKTVFVGDLRL
ADFKQLLATKGIQAEFAGGVLRCADNIAVRKSGGQQLVIEGSLSDDYYKVRELLYSQYHI
V
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggggacgagcgtccagctgaccccgctcgccggcgctcactccgaggggccgctctgc
tacctcctccaggtcgacgatttcagattcttgctggattgcggctggaacgatgtcttc
gatgtctctctcctccagcccctcgtcagtgtcgctcccacgatcgatgctgttcttctc
tcccattctgacacgctgcatctcggagcgctaccctacgcgatcgcgaagctgggactc
aatgcgaccgtctattgcacgcatcccatccggtccatgggccatatgcaaatgtatgat
cattgcctctcgcgaactgctgtgtcgcattttgatctcttcagcctggatgatgtagac
actgccttctcgaacacctgtcctctcaagtactctcaacattttcctcttcaaggcaag
gggcaaggcattaccatcacaccgtttccagcagccagacttttaggcggaactatctgg
aaaatcactaaggacacggaagacatcatatatgctgtcgatttcaaccatcgcaaagaa
aggcatttaaatgcaacggttttagagtccttcactaggcctgcagtgcttattacggat
gcttacaatgctctcaattctcagcctgtgcgccggcaacgagatcaagaatttctggat
attatcttgaggactctacgctcctctggaaatgttcttttgcctgtcgaaccgtctggt
cgggtattagagattattttgtacctggaccagcattggagccagcaccgaataaacgta
cccctcgtttttcttacgtatgtggtcggcagcgtaactgactttgttaagagctcgctt
gaatggatgaatgatgctataggaaaagcattcgaacagaatcgtgagaatccattcgca
ctaagatccgtgaaattgtgcacctcacgaaaacagcttgacgagcttcctccaggaccc
agggttgttcttgcatccatggcgagcttggaaacaggatttgcgaaagaattgtttttg
gagtgggctgtagatcctaaaaatcttgtactttttacggaacgggctcaggttggaaca
ctagcgcgtcagctacaagtggagcctccgccaaagattgtgaaaatcaccatcagcaag
aaagtccttcttgtcggtgaggagctggaggcttacgagcgtgagcagtcgcggctcaga
gaggaagcaaggaacgcagcttctcaacaggaaccagtccagccagcttcttcaagcgac
gacctgatgccatcggctccggacgagtcaagtacaccatcagaagggaaacagcaagcg
gtcactgttcatcatgatattttcatagatggtttcacggttccggctgacaccgtagca
cccatgttcccggtttatgacgatagcaacgaacgtgacgagtatggggaaattattaac
cctgatgactttgtgattaaagaagagtttatggactactcccaaactcaggctaatgca
aataatataaagctagagacagaaggagacacctctgcagaaaagccgtcgaaagtcgtc
acgactgatacagcggtggtcccactgtgtgcgctgacattcatggattttgagggccga
gccgatggacgatcgatcaagtcgatattggcccatgtagctcccttgaagctggttttg
atccatggatccgcggaatctaccgaacacttgaagcagcactgcctcaaaaatgtctgt
ccgttcgtctacactccacgggttggtgaaaatatgaacgtcacttccgatctcaatgcg
tataagctgaggctgacggagcgtataatgagcagcgtcctcttcagaaagcttggagat
tacgagctagcgtgggttgatggagaaatcggacagaatgaggaggacttactcccactt
ttgcctctggacggaacgccacctccacacaagaccgtctttgttggggatttgcgcctt
gctgatttcaagcagctattagccaccaaaggcatccaggcagaatttgccggtggtgtt
ctccgttgcgctgacaacatagccgttcgcaagagtggaggacagcaactcgtaatcgag
ggatctttgtctgacgactactacaaagtccgggagctgctctactcacaataccacata
gtgtga

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