Selaginella moellendorffii: SELMODRAFT_442069
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Entry
SELMODRAFT_442069 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_442069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_442069
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_442069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
9641661
NCBI-ProteinID:
XP_002973392
JGI:
442069
UniProt:
D8RPZ6
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MERKSHRTKVLVFGMAPKRGRGRGGGGRGRGGRGKGRDAGPNYPSRLLKEIGLPLDLNDR
KRRHSRKSGKPADEPDSVASDLYEYQEGVPQEESGKNRRFDQVDKLEYELPSDFEDEEID
EGAASGEENVGTLDDKSLEDDDDEDDEGDEEEGDQEELHDRMLMEVTGKANRHAKKVKED
ISYMDDKNEEVPITVEDLLAPLQEKPGFNALKKRVRSLQKSAAPVSVPLPKNIQEKIDRQ
AGYEKTVEDISKWQPIVKRNREASTLKFIDKVNVALSSTTSMVADFKPSTAFEKEVAALL
KENGVADPSQIEAKESLELNKLSVDEVRDRQERLAKMRNLLFRHEERAKRVKKIKSKTFH
RLARKSQKTKADMLADDPDVQLEETMKQELNRARERMTLKHKNTSRWAKRILKRGLQQHN
EGTREAITEQLREHALLTRKIHSAKSESSSSDEDEEDDSDKDDEPGLVLEKPGSRVLAKA
KVATLKALEEGTNDTELPTTGIFALPFMVRAIEKKRKEAEDEARAVLEELESAGADDAGP
SQETGPLKGKLSFGGHADKVSAMKAIDEEDDMVERGTDSENSEDESPLMGTKMLLVTRKE
KKRKSDPVPVNAVDIEDVDLEGMVSAAVEHTTKVDEPITIAGDKSERTKKKKKKKSKNKE
SATRLEDAMGVEVTKHSVISANPTVFGTDEVARPETNSKSVADESFKVAIAGRPKDTSHK
QDKKTVPEQENSVEEQEEDLDYDGDEVIVPRSQEDLIREAFAGDDVEAEFQEAKAAAVDE
ECPQEELERMDLPGWGQWTDIQKKRGPPQWMLKQQEEAKRKKEEAEKRRLDAKLKHVIIS
QKTDKKAAKFLSSSLPFPYTSREVFEKTMRMPLGRDYNPTKAFQDLTRPSIIKRAGVIID
PIEYEDVGKRKRKQERWAIASRITQAKDSKHLEKLWQQFF
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcaaaagccacaggacgaaagttcttgtgtttggtatggcgcccaagcgggga
agaggaaggggagggggaggaagaggcaggggaggaagaggcaagggcagggatgccggg
ccaaattacccatcgcgtcttctcaaggagattggcctgccgctggatctgaatgatcgc
aagaggcggcattctcgcaaatccggcaagccggcggatgagcccgattcggttgccagc
gatttgtacgagtaccaagagggtgtgccgcaggaggagtccgggaagaacaggcggttt
gaccaggtggacaagctggagtacgagcttccatcggatttcgaggacgaggagatcgat
gaaggtgctgcgtctggagaggagaatgttggaactttggatgataaatcactggaagat
gacgacgatgaagatgacgagggagacgaagaagaaggagatcaggaagaactccatgat
agaatgctcatggaagtcactggtaaagcgaaccgacatgctaagaaggtcaaggaagat
atcagctacatggatgataagaatgaagaagtgccaatcactgttgaggatttgctggct
ccactccaggaaaagcctggatttaatgcgctcaagaaacgggttcgatcactgcaaaag
agtgcggctccggtgtcggtaccgctgccgaaaaatattcaggagaagatcgatagacaa
gctggctacgagaaaactgttgaggacatcagcaagtggcagccgatcgtgaaaaggaat
cgtgaagcctctacactgaagtttattgacaaagtaaacgtcgccctttcatcaacgacg
tcgatggtcgctgatttcaagccttcgacagcgtttgagaaggaggtggcagctttgcta
aaggaaaacggtgtggccgatccttctcaaattgaggccaaggaaagcctcgagcttaac
aagctatcggttgatgaagtcagggatcgtcaagagagacttgctaaaatgcgtaatctt
ctattccgtcacgaggagagagccaagagagtaaaaaagatcaagtccaaaacgtttcat
cggcttgcgaggaaatcgcagaagaccaaagcagatatgttggcggatgatcctgacgta
caactcgaggaaactatgaagcaggagttgaatcgtgcaagggagcgcatgacattgaaa
cacaaaaacacgtctcgctgggcaaaaagaattctaaagcgtggcttgcagcaacacaat
gagggaacaagagaggctatcacagagcagctccgtgagcacgcgttgttgacgagaaaa
attcattctgccaagtctgagagcagtagcagtgacgaggacgaggaagacgacagtgat
aaggatgatgagccgggacttgtgctagaaaagcctggatcaagagtgctagccaaagcc
aaggtcgctacgttgaaagcactggaagaaggaaccaacgacaccgagctaccgactact
ggtatctttgctcttccattcatggtccgtgcgattgagaaaaagagaaaagaagcagaa
gatgaggcccgagcagtgttagaagaacttgaatctgctggagctgacgatgctggtccc
agccaggaaactggcccattaaaagggaaactgtcgtttggaggccacgcagacaaggtg
tccgctatgaaagctatcgatgaagaagatgacatggtcgagcgtggaaccgatagtgaa
aactcagaagatgaatctccgttgatgggaacgaagatgctattagtcacgaggaaggag
aaaaagagaaaatctgatcctgttcctgtcaatgccgttgatattgaggatgttgatcta
gaaggaatggttagcgctgccgtggagcacaccacgaaagttgacgaaccaatcacgata
gctggagacaagagcgagaggacgaagaagaaaaagaagaagaaaagcaaaaacaaggaa
tcggcgactagacttgaagatgcgatgggagtggaggtgacaaagcattcggttatcagt
gcaaacccgacagtattcggcacggacgaagttgcgaggccagaaacaaacagcaaaagc
gtagcagacgaaagttttaaggtggcgattgcggggcggccaaaggatacgagtcacaag
caggacaaaaaaactgtaccagagcaggaaaacagcgtggaagaacaagaggaagatctc
gattacgacggtgacgaagtcatagttccacgtagtcaagaggatctgattcgagaggct
tttgctggagacgatgtggaggccgagttccaagaagcaaaagcggccgcagtggacgaa
gagtgtccccaagaagaactcgagagaatggacttaccagggtgggggcagtggacagac
atccagaagaagagaggtcctccacaatggatgctaaagcaacaggaggaggccaagcga
aagaaagaagaggccgagaagcggagactggatgcaaagctcaagcacgtcatcatcagc
cagaagactgataagaaggctgcaaagttcctgtcgtcgtcgctgccattcccctacaca
tcgagagaagttttcgagaaaacaatgcggatgccattggggcgtgattacaacccaacc
aaagcttttcaggacttgacacgaccatctataatcaaacgagcgggagtgataatcgat
ccaatcgagtacgaggacgtcggcaagagaaaacgcaagcaagaaagatgggcgatagcg
tctcgaataacacaagcaaaggatagcaagcatctcgaaaagctatggcaacaatttttt
tga
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