Selaginella moellendorffii: SELMODRAFT_442126
Help
Entry
SELMODRAFT_442126 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14289
exportin-5
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_442126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_442126
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_442126
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SELMODRAFT_442126
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
SELMODRAFT_442126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
9642423
NCBI-ProteinID:
XP_002973645
JGI:
442126
UniProt:
D8RQZ1
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MVDPASVAAAVKAALDCAQDRLAAISFLDSIKSGDVRVLGGTAFALSSQNQPLEVRHYGL
KLLQHLVRIRWDELNHEEKGKMTGMVLDMVKEFATPHEAWSVKSQTAALVAEVTRREEPD
VWKGMLKSLLPISDMSPVHAEMVAMVMRWLPEDVIVHNEDLETTRRRQLLSELTESLPQL
FPFFYKLLEKHFGAGMEAMHLQQMELAKQHAAVVTAALQAVLVYAEWSPVTNFSSYGLVE
ACGFLINSSEFRLAACEILKQLLSRRKPYDEDVELFNSVLARVYEILSSVCDAYFVHYDG
GGSAPLEFAECLCEALVALGSQNLQVISSNNQKLATYYRQMLKFLQHSEFSLHVQALPLW
LGLLRDSLSVERNKVIIARPTVVVPIETASVLLDVAFQKLLKDGQEEEFTSAVDYSQYRG
RLIELIRLVAHHHHDLGITKVVQRLDVFLTKEKISSQEYFILESTHTMLDAVVTGCFARG
GTSELLGGLLQRLLTVHWSEPELVEIHAKCFDALVPYIKNVPTAVPTVIQKLFQLLVTVP
VVSKEASSTNSKARFQVCTSFLRIAKLAGPALFPHMQIVAETMTRLQQERHLLRGEYILL
GESLLVAGSTAGQEQQNQVLEWLLGPFRDYWCHSDWQQKYLCDPAGFVRLLGTTTTENLS
GDEGMWYIFHSIHFFEKALRRCAAGVEGNPSSHPMAVHMSWILPPLIQLLRCLHSLWIPS
ILSTLPPPVRQAIHLSASEQASILGESKTVDHKEDELRNWLKSVRDSGYNVLRYASSRLG
NQFFVNMSGLSGPLATGLMESLSSMEFRHLRSLVHSVIQSFVRFCPHSLREVWLGQLLPP
LLVHCHATLPLAWENLVREGAVKTGTLFAVDGSSGINTELVEERMLRELTREVCTLLAIM
ASSELNPEQQPGMLCYVIQHSAAAFATVHLGIQSLQWPDSDAVHRGAVFCGAVIDVAGPL
NDTNLREIVGKDMFTAIIQSLTLESNSAAHAELLGLLREILVKLSPHTSTPKQVLMSLPS
ISQQEFANFETAFNKTTSVKEQRQHIKNLLLAAGGDKLKALKPQKNTSVITNVTKPLAKG
KPGVKEDDGPGLVGLATLM
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcctgcgagcgtcgctgccgcagtgaaggcggctctcgattgcgcgcaagat
cgtctggcagcaatatcatttttggattcgatcaaatcgggggacgtgcgcgtgctcgga
ggaactgcattcgcgttatcgagccaaaatcagcctctcgaagtccggcattatggattg
aagcttttacaacatctggttcgaatcaggtgggacgagctcaaccatgaagaaaaaggg
aagatgactggcatggtgctggatatggtcaaagaatttgctactcctcacgaggcatgg
tctgtgaagagccagaccgccgcactagtggcagaggttacgagaagggaagaaccggac
gtttggaaagggatgctaaaatctctacttcctataagcgacatgagtcctgttcacgct
gaaatggttgctatggtgatgcgttggcttccagaagatgtgattgttcacaacgaagat
ctagaaaccacgcggaggaggcaattgttgtcagaacttacggaaagtcttccccagctc
tttccattcttctacaaacttttggaaaaacattttggcgctgggatggaagctatgcat
ttgcagcaaatggagctagcgaagcagcatgccgctgtcgtgacggctgccttacaagct
gttcttgtgtacgcagaatggtctcctgtcaccaacttctctagctatggcctcgtagaa
gcttgtggtttcttgataaattcgtcagagtttcgtttggccgcttgtgagattttaaag
caactgctatccaggagaaagccatacgacgaagatgtcgagctcttcaattctgtgctt
gcgcgcgtctatgaaattctttcgtccgtttgcgacgcatattttgttcattacgatggg
ggtggcagtgcccctctggagttcgcggagtgcctgtgcgaagcacttgtcgctcttggg
tctcaaaatctgcaggtgatttcatccaacaatcaaaagcttgcaacgtattatcgtcag
atgttgaagtttctgcaacactctgaattttcgttgcatgttcaggcattgccattatgg
ctgggactattacgtgactctttatcggtagagcggaacaaggtgatcatagcaagacct
acagtggttgttccgattgaaaccgcgagcgtgctacttgatgtggcatttcagaagctt
ctaaaagatggccaggaagaagaattcacatctgcggtggattatagccagtatcgtggc
cgtttgatagaactaattcgactggttgcacatcaccatcatgacctgggcattacaaaa
gttgttcaacgccttgatgtttttctgacgaaagagaagatatcttctcaggagtatttc
attctcgagagtacacataccatgctggatgcagttgtaaccggatgttttgcacgtgga
ggaacgagtgagcttctgggtggtttattgcagcgattgctgaccgtccattggagtgaa
ccggagcttgtggagatccacgcaaagtgttttgatgctcttgtgccttacataaagaat
gtaccaactgcagtacctacggtgatacagaaattgtttcaacttttagtaacagtgcct
gtagtctcaaaggaagcgagctctaccaattcgaaggcaagatttcaagtctgcacatcg
tttctgcgtatagcaaaactggcgggtccagctttatttcctcacatgcagattgttgct
gaaacaatgacgaggctacagcaggagcgccacctccttcgtggggagtacatattgttg
ggtgaatccttattggttgcggggtctactgccgggcaggagcaacaaaatcaagttttg
gaatggctacttggaccattcagagattattggtgtcactccgactggcaacaaaagtat
ctgtgtgatcctgctggttttgtgcgactactgggtacgactaccacggaaaacttgtct
ggggacgaaggcatgtggtacatttttcacagcattcatttctttgaaaaggcgctcaga
agatgtgcggctggtgtggaaggtaatcctagttcacatcccatggcagttcacatgtct
tggattttgccgcctttgatacagttgttacgctgcttgcactcgctgtggattccatcg
attctatccacgttgcctccgcctgttcgccaagcaatacatttaagcgctagtgagcaa
gcatcgatacttggagaatctaagacagtcgatcacaaagaggatgaactaagaaactgg
ctcaaatctgttcgcgacagtggatacaacgttttacgttatgcaagttctcgcttaggg
aatcagttcttcgtcaacatgtctggactgagtgggcctctagcaactgggctcatggag
agtctttcttcaatggaatttcgccatcttcgttccctggttcattcggttatacagtca
tttgtaaggttttgcccgcactctctccgagaagtctggctcggtcagttgttgccaccg
ttacttgttcattgtcatgcgaccctgccactagcctgggaaaacctcgtgagggaaggt
gctgtcaagactggcactttatttgcagtggacggaagttcgggaatcaatacggaactc
gtcgaggagcgtatgctaagggaactgactcgtgaagtctgcacacttttggctatcatg
gcctcaagtgaactcaatccggagcagcagccgggaatgctttgttatgtaatccagcac
tccgctgctgctttcgcaacggtccatctaggaattcagtcattgcaatggccagatagc
gatgcggttcacagaggtgcggttttttgtggagctgtgattgacgtggctggtccactt
aacgacaccaacttaagagagatcgtggggaaagatatgttcactgctataatccagagc
ttgacactagagtcgaacagcgcagcgcatgctgaacttctcggtttgctccgggaaatt
ctagtgaaactatctccacacacgtcaacgcctaaacaagttttgatgtctctgccttcc
atcagtcaacaagaatttgcgaattttgaaacagcctttaacaaaaccaccagcgtgaaa
gagcagcgccagcacataaagaatcttctcttggcggctggaggggacaagctcaaggca
ctgaaaccgcagaagaacactagtgtcatcactaacgttacaaagcctctagcgaaaggg
aaaccgggagtgaaagaggacgatggtccagggcttgttggcctggcaactttgatgtga
DBGET
integrated database retrieval system
