Selaginella moellendorffii: SELMODRAFT_442188
Help
Entry
SELMODRAFT_442188 CDS
T01496
Symbol
RR1-1
Name
(RefSeq) type B response regulator
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
smo
Selaginella moellendorffii
Pathway
smo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
SELMODRAFT_442188 (RR1-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smo03000
]
SELMODRAFT_442188 (RR1-1)
Transcription factors [BR:
smo03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
SELMODRAFT_442188 (RR1-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
9642207
NCBI-ProteinID:
XP_002973731
JGI:
442188
UniProt:
D8RRG0
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MRMTSGDLGQSGYISSPNLSTVSTDGSKDQFPVGMRVLVVDDDQTTLTILEAMLRRCRYN
VTTCGKATTALALLREHKNDFDLVISDVYMPDMDGFKLLELVGLEMDLPVIMMSTDGDYN
NVMKGITHGACDYLLKPVRMEELRNIWQHLVRKRKNEARETETLTPAEADKLKGGGGDDV
EHLSSACSKKRKDVKEEDEGVDHDSEDPSSLKKPRVVWSVELHQQFVNAVNKLNIDKAVP
KKILELMDVPGLTRENVASHLQKYRLYLKRISAQQPQNSAGFSFGGADGPVEGRGHGSFS
LQAVPAVQQGVIGRIGTTNNLPASTALDQSGLLQLSGGGPVFRPNMTPPVFGSQNSYFPA
FSGGYQIEQQAPQVPLYGLNPIQQQVPANASPKLPGMTNLGLTGTFCPNQNGSSNPLVVQ
LLQHQRQQQQQQPPIGIPGPGLGQQQRTVLSEINLGVNTGLNDEVGYTGLNAAVMRSSGA
MENKNGGLLGVVESNFSPASLGGIPPLPPVAPAPMVSFDAAEVAAVKGLNPGAVVSSAGF
GMPVYNQNRRPQEWAGTQEQQRLEACSPVMSPPSYNHSVGSHTNNYNAVAAGQDVHQQHK
KLLEDEIIVNPGTVRSLRESSEKSTAESSFKPKVETISDSLISAKIGFQIDQQQQAPAAD
DLLSFYLKQQQQEDMSFVDNDLAFDGYVADNLNLSSELFLCRELR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgacttcgggcgatctaggacaaagtggctacatcagtagcccgaatcttagc
acagtgagcacggatggttccaaggatcagtttcctgttggtatgagggttttggtggtt
gacgacgatcaaaccacgctcacgattcttgaggcgatgcttcgccgctgtcgctacaac
gtgacgacgtgtggcaaggcgactacggcgctagcactgctgcgagagcataagaacgac
tttgatctggttataagcgatgtctacatgccagacatggatggtttcaagctgctcgag
ctcgtgggtctagagatggatcttccagtcatcatgatgtccaccgatggagactataac
aacgtgatgaaagggatcactcatggtgcttgcgactacttgctcaagccggttagaatg
gaggagttgcgtaacatatggcaacacctagtgcggaagagaaagaatgaggcgagggag
actgagaccttaactccggccgaggctgataaactcaagggcggaggaggggatgacgtt
gagcacttgtcgtcggcgtgttcgaagaaacgaaaagatgtgaaggaggaggacgaaggt
gttgatcatgatagcgaagacccttcgtctttgaagaaaccacgggttgtttggtcagtg
gagcttcaccagcagttcgtgaacgctgtcaacaagctcaacattgataaggccgttcct
aaaaagatcttggagcttatggacgttcctggccttaccagggaaaacgttgcaagtcat
ttacagaagtaccggctgtacctgaaaaggatcagcgctcagcaaccgcaaaactcagca
ggtttctcgtttggtggtgccgatggtcctgttgaagggcggggccacggctcattttca
ttgcaagcggtcccggcagttcagcaaggagtaattggtaggataggcacgacaaacaat
ttgccagcgtcaaccgcactcgatcagtctggtcttcttcagctctccggcggcggaccg
gtgtttagaccaaacatgacaccgccagttttcgggtcccagaactcgtacttcccggct
ttctcaggtggatatcagatagaacagcaggctccgcaggtacctctgtatggactaaac
ccgatccaacaacaggttcctgcaaatgcctcgccaaagctaccgggtatgaccaacctg
ggactaactgggactttttgtccgaatcaaaacggttcttcgaatcctctcgtggtacag
ctacttcaacaccaaaggcagcagcaacagcagcagccaccgataggaattccagggccg
ggcttgggacaacagcaacgtacagtcttgagcgagataaacctgggagtcaacacgggg
ttaaacgacgaggttggctacactgggctaaacgcagcggtgatgaggagctcgggtgcc
atggaaaacaagaacggaggcttactgggtgtagtggaaagcaacttctctccagcgagc
ctgggcggtattcctccacttccacccgtcgcccccgcccccatggtttcgttcgacgcg
gcagaggttgcggctgtcaagggattgaacccaggagcagtggtttcttcagccggcttt
ggaatgccggtgtataaccagaaccggaggcctcaagagtgggcgggtacgcaggaacag
caacgactggaagcttgcagcccggtgatgagccccccgagctacaatcactcggtcggg
agccacactaacaattacaacgcggtggcggccgggcaagacgttcatcagcaacacaag
aagttactggaggacgagatcattgtgaatccaggcaccgtgcggagcttgcgagagagc
agcgagaaatcaaccgcggagagctccttcaagcccaaggtggaaaccatatcggactcg
ttgataagtgctaagataggcttccagattgatcagcaacagcaagctccagctgcggat
gatcttctcagcttttacttgaagcagcaacaacaggaagatatgagctttgtggacaac
gatttggcattcgatggttatgtagctgataatctgaatttgagctccgagttattcctg
tgcagggagctgcgatag
DBGET
integrated database retrieval system
