Selaginella moellendorffii: SELMODRAFT_442305
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Entry
SELMODRAFT_442305 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K23288
syndetin
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_442305
Membrane trafficking [BR:
smo04131
]
Protein recycling
Others
EARP complex
SELMODRAFT_442305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
KxDL
Motif
Other DBs
NCBI-GeneID:
9655951
NCBI-ProteinID:
XP_002973894
JGI:
442305
UniProt:
D8RSE0
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MDFKNIGEKFLQSVKAGRARSFILSSSSDRPEIPARAAAAAAIAKSIAATPPHDRLSIAS
TSGETPSDFDPVRYLLEHLPEQPTQEFFENKVSQRMLQLDDITEKLSIQVMEHHEEMVKG
MQMVTEVEKDLQVSKIICKNGRRRLSLAIHEVSQDLVVAGNVRKKQVLMDMLPILERIQH
AIDIKSRLDSTIEEGNYGKALQMCSECLQLLEEMSGLAAVQDMNHSIEEWLQKTIVKVDE
VLLDVCRQFNVEKYMTVIDAYAMIDDIPGLSDKTQTFYAQIIVARTHSVLKEYLPQVYFA
YYIMYALFDVPCTDRRITSSSEKGKTSAVSNGVLHRSRSQGSLSQPVQAAHRHSSSLESG
TKDDSVSGRMQNGPALTEDMLDSRNRLRMEVARAVGKGLEKGRKTVWELAARRVSALLSS
DAFCAASAHHFLLNLDLLNKFILAGEAFSGAEAIPLRAKLVKQSEKYFGAFHRQNLEVLR
MMLEKEPWQRVPSGFLKSLNLAGLTGNGAPIVASTTSESMMLKPGEKLEVQQGFTEWLRK
GNPFTESRIADVSSGKLDGSPHGKMPSNVTPKEEEEENEDLLADFIDEDSQRPGRLETKS
NAGDDERITLTSSSINMLRSIDRYARLMQILEPISLEVFKGLSQVFELYFFIVFKTFGQR
DLFSGRAPSDSPSVISGRLRGALVRISQQLEEQRLKYAAGHPQPMNAGVFEMSSQGLGGM
VSPSNFFAIKERTVAAESLIFLATLIRNSRQHLQSLLHQNALPFVDQFFARTVDASIDLR
EHVYKTGARLLLNIGSYVDRISNTRWELKELGMEHNGYVDSLLGEFKQYTVRLSNAGVSR
QVHELLLQYGVDILAETLVEGLSRVRRCNNEGRAVMSLDLQVLINGLQHLAPAKLKANLQ
IVDAYIKAFYLPETEYLYWAKSHPEYSKQQIINLINLVASMNNWKRKTRTDLLERIESGD
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaagaatatcggggagaagttcctccagtctgtgaaagctggacgagctcgg
agttttatactgtcttcctcttcggacaggcccgagatccccgccagggctgcggctgct
gcggctattgccaagagcatcgctgctacccctcctcatgatcgtctttcgatcgcatca
acctctggagagacgccctcggacttcgatccggtgagatatcttctggagcacttaccc
gagcaaccaactcaagagtttttcgaaaacaaggtatctcaaaggatgttgcagcttgat
gatataacggagaaactttcaattcaggttatggaacatcacgaagaaatggtgaaagga
atgcaaatggtcactgaagtggagaaagatctacaagtctcaaaaatcatatgtaagaat
ggtcgcaggcgtttgtctcttgcaatacatgaagtctctcaagaccttgtagtcgctgga
aacgttcggaagaaacaggttctaatggatatgcttcctattctagaaagaatacaacat
gcaatagacatcaagtcccggctagacagcaccattgaggaaggcaattacggcaaagcg
ctacaaatgtgctcagagtgtttacaacttcttgaagaaatgtcggggcttgcagctgtg
caggacatgaatcatagtatcgaggaatggttgcaaaaaactattgtaaaggtcgatgaa
gttctacttgatgtttgtagacagttcaacgttgaaaaatatatgacggttattgacgcg
tatgccatgatagacgatattccaggactctctgataagacacaaactttttatgctcag
atcattgtagcaaggacacattcggtcctgaaggagtatctacctcaggtttattttgcc
tactacattatgtatgccttatttgacgttccttgcacagacagacgaattacaagcagc
tcagagaaggggaagacatcagctgtatccaacggtgtgcttcaccggagccgtagccaa
ggaagcttgagtcagcctgttcaagcagcgcaccgtcatagctcgtccctggagtcagga
acaaaagacgattctgtcagtggaaggatgcaaaatggaccagcattaactgaagatatg
ctggattctagaaacaggctgcggatggaggtggcacgagcggttgggaaagggctagaa
aaggggaggaagactgtctgggagcttgctgcgcgaagagtatctgcacttctatcttct
gatgcgttctgtgcagctagtgctcatcatttcttactgaaccttgatctgctcaacaag
tttattcttgctggcgaagccttcagtggtgccgaagccatacctttgcgagctaaactg
gtgaagcagagcgaaaaatattttggagcttttcatcggcaaaacctcgaggtcttacgt
atgatgctagaaaaggaaccatggcaaagagttccctccggttttctcaagtcactgaat
ctagccggacttacaggaaatggtgcaccgatagttgcgtcaaccacgtctgagtccatg
atgctaaagcctggtgaaaagttggaggtgcagcagggattcaccgagtggttaaggaaa
gggaatccatttactgagtcgagaattgcagacgtgagctcgggaaaactagacggttct
ccccacggaaaaatgccgagcaatgtgacccctaaagaagaagaagaagaaaacgaagat
cttctggcggattttattgacgaggacagtcaacgtcccggtcggctggaaaccaaatcc
aatgctggtgatgatgagcgaataacattaaccagctcgtccataaacatgctcaggtcc
attgatagatatgcaaggctcatgcaaatattggagcctatcagtctggaagttttcaag
ggccttagccaagtgtttgagctctacttttttattgttttcaaaacattcggacaacgt
gatttgttcagtgggagagcgccttctgactctccttctgtaatttccggtcgtctcaga
ggagcgttggttagaatctctcagcagctggaagagcaaaggttgaaatatgctgctggg
catcctcaacccatgaatgctggagtttttgagatgtcgtcacaaggattgggaggcatg
gtttctcccagcaattttttcgccattaaggagcgtacggttgcggcggaatcgctcatt
tttcttgccacgcttataagaaattctcgtcagcatcttcaatcgctactgcatcaaaat
gctctaccatttgtagaccagttttttgccagaacggtcgatgcatccatagacttgaga
gagcacgtatacaagacaggtgctcgtcttttgctgaatataggatcatatgtcgatcgt
atatccaatacaagatgggagctcaaagagcttggcatggagcacaacggatatgtagat
tcacttctcggcgaattcaagcagtatactgtgcgcttgtcaaacgccggcgtctccaga
caggtccatgaactcctcctgcaatacggagtggatatattggcggagacactcgtggaa
ggcctttcgagagtaaggaggtgtaataacgagggacgtgcggtcatgtctctggacctt
caggttctaataaacggcttgcaacatcttgctcccgcgaaactgaaagcaaacctccag
atcgtggacgcttacataaaggcattctatcttcccgaaacagaatacttgtactgggct
aaatctcatccggagtactccaagcaacaaatcatcaacctcatcaacctggtagcgtcc
atgaacaactggaagcgtaaaacaaggacggacttgctggaaaggatcgaaagcggcgat
ttgtaa
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