KEGG   Selaginella moellendorffii: SELMODRAFT_442906
Entry
SELMODRAFT_442906 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
smo  Selaginella moellendorffii
Pathway
smo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:smo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    SELMODRAFT_442906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smo04131]
    SELMODRAFT_442906
Membrane trafficking [BR:smo04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    SELMODRAFT_442906
SSDB
Motif
Pfam: CNH Vps39_1 zf-Vps39_C TPR_Vps41 Clathrin
Other DBs
NCBI-GeneID: 9630374
NCBI-ProteinID: XP_002975550
JGI: 442906
UniProt: D8RX12
LinkDB
Position
Unknown
AA seq 962 aa
MVHNAFDDVCVVRDCPSRIESAIVTESSTRGEFLHVGCIDGSLRIYSLPDSSQDEEDLGA
ERSRSCVLRRTIVGFAKKAVSQMDLVKSRGGMLITLAEAVAVHSLPGFEPVAFLAKTKGA
NLFCWDERRGLLCVARHKKLLIYRHDGSRDFTEVKEISIPDVVKSMVWCGDCVCLGVKRE
YVFVNAATGASTDIFPCGRSAPPLVVSLPRGELLLGKDNIGVFVDQSGKVTPQTALSWSE
SPSAVMVHPPYILARLSRFIEVRTLREPYSVVQMIAHKDKQLLQSSSFGLLAASENSVYK
LVPVAIGVQVVQLAASGNFEDALALCKLMPPEDASLRASKEDAIHKRYGQFLFSRGQYVE
ALQHFALSSMSLPSIIALFPSVKLPEFCVFDEFKDMENSGELEVDENNSNSVSTSISLAA
LATFLMNKRGDVIANAEAKDTDEALAALSETGHKHNVSTRLEPDDPRKSAAVLDTALIQA
LLLTNQSPVAIQLLRGSNYCDVDACREMMLAGGFYKELLELYQFNKMHKEALQLLARLVE
NPESFPVPPPKDAYGPEALVDYLQPLGGQDQTLIMELSTLILKLSPDQAMKLFTSTNPPL
PPKYVLLKLKAHAPDLQIVYLEEMVKHNPDSLSAEFQNELILLYLSNVLEGKPDDSKSKL
LTALETFTAYNARDIFPRFPGEGFYEEKAVLLGRMEYHKLTLSIYVHKLHNQEKALAYCD
RVFDRVVETASQTILNAPVDHKAAELYSKLLEMYLRPKKSLKELKLALASLGGLKYDISR
ADGADGADGAGLVHRHKHKGHVRHKVTQIEDALSFTNGNESATESNKSDTEESVDGRTED
GIMLEEAIHLLSSRWDRFHGTEVLSMLPSDAKLKDLLSFLEPLLRRSTERSRNAAVIGRV
EYSDHIEVRHELLQCRARRFRLTNETLCSICRKKIGPSVFAVYPGGAFAHFVCYSQHRAS
GA
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggtgcacaatgcgtttgacgacgtgtgcgtggtgagggattgcccctcgaggatcgag
agcgccattgtcacggagtccagcaccagaggtgaattcctccatgtcggctgcatcgac
gggagcctgcgcatctattcgctcccggactcgtcacaagacgaggaggatctcggcgcg
gagcgcagcaggagctgtgtgctgcggcggacgatcgtggggttcgccaagaaggcggtg
tcgcagatggatctggtgaaatcgcggggcgggatgctcatcactctcgccgaggcagtg
gccgtccattcgctgccaggtttcgagcctgtagcgtttcttgcaaagacgaaaggggcc
aatctcttctgctgggacgagcgaagaggattgctgtgcgttgccaggcacaagaagctt
ctcatttacaggcacgatggaagcagggatttcacggaagttaaagagatctccattcca
gatgtcgtgaagtccatggtctggtgtggcgattgtgtttgtcttggtgtgaagcgcgag
tatgtttttgtaaatgcggcaactggagcgtccacggatatctttccttgcggtcgaagt
gccccgccgctcgtcgtttccttgcctcgtggcgagcttctacttggcaaggacaatatt
ggagtattcgtagatcaatcggggaaagtaaccccgcaaactgctttaagctggtcggaa
tcgccctcagctgtgatggttcatccaccatatatccttgctcggctttcaagatttata
gaggtaagaacgctgagggagccttacagtgtcgtgcaaatgatagcgcacaaagacaag
cagctgctacagtcgagtagtttcggtttgctggccgcgtccgagaactctgtctacaag
cttgtccctgtcgccattggtgtccaggtagtgcaattagcggcatcaggcaactttgaa
gatgcattggcgctttgcaagctaatgcctcccgaggatgcatctctgcgagcttcgaaa
gaagatgccatacacaaaaggtatggccagtttcttttcagtcgcggacaatatgttgaa
gcgttgcagcacttcgcactatcatccatgagtctgccgtcaatcatcgcgttgttccct
tcagtgaagctgccggagttttgcgtatttgacgagttcaaagacatggagaactcgggg
gagctagaggtggatgaaaataatagcaactccgtctcaacatctatctctctggcggct
ttggcgaccttcttgatgaataaacgaggggatgtcattgctaacgccgaggcgaaagat
acggacgaggcactggcagctttgtctgaaacgggtcacaagcataatgtttccacgaga
ctggagccagacgatccacggaagagtgctgccgtcttggatacagcacttatccaagcg
ttgttgcttacaaaccagtctccagttgcaattcaacttcttcgaggctcaaactactgc
gacgtagatgcgtgccgagaaatgatgcttgctggaggcttttacaaggagctcctagaa
ctgtatcagttcaacaaaatgcataaagaggctctacaactactggctcgtttggtcgag
aacccagagtcctttccagttccacctccaaaggatgcgtacggcccagaggctcttgtg
gattacttgcagcctctcgggggacaggatcagacacttatcatggaattgtcaacacta
attttaaagctgagtccggaccaggccatgaagctgtttacgtctacaaatcctccccta
cctccaaagtatgtgctgttgaagctgaaggcacacgctcctgatctgcagattgtttac
cttgaggaaatggtgaagcacaatccagattctttatcagcagagtttcagaacgagctt
atactactgtatttgtccaatgtcctcgaaggaaagccagacgactcaaaatctaaatta
ttgaccgctctagaaactttcaccgcttataatgctcgagacatatttccccgttttccg
ggggagggtttttacgaagaaaaggcagtacttctgggacgaatggagtaccacaaactt
acgctttctatatatgtgcacaagcttcataatcaagaaaaggcgctagcgtattgtgat
cgtgtctttgatcgtgtcgttgaaacagcatcacagacaatattgaatgcacccgtcgat
cacaaggcagcggaattgtactcaaagctgctggagatgtaccttcggcccaaaaagtcc
ctcaaagaacttaagctagcccttgctagtcttggtggtctcaaatacgatatatcaaga
gctgatggagctgatggagctgatggagctggcctagtacacaggcacaaacacaaggga
cacgttcgacacaaagtcactcagattgaagacgcactgagttttacgaatggcaacgaa
agtgctaccgaaagcaataagagcgacactgaagaaagtgtcgacgggaggacggaggat
ggaattatgctggaagaagccattcatctactgagcagcagatgggatcgctttcacggc
accgaagtcctatcgatgctaccgtccgatgccaagctaaaggatcttctttcgtttttg
gaaccactgttgcggagatccactgaaagaagccggaatgcagcggtcatcgggcgagtg
gagtatagcgatcacatagaagtccgtcatgagctgcttcaatgtagagcacggcgattc
agactcacgaacgagacattgtgctcgatttgtcgcaaaaagattggacccagcgttttt
gcagtgtatcctggcggtgctttcgcacattttgtttgttactctcaacacagagcttct
ggagcgtga

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