KEGG   Selaginella moellendorffii: SELMODRAFT_443461
Entry
SELMODRAFT_443461 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
smo  Selaginella moellendorffii
Pathway
smo03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SELMODRAFT_443461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_443461
Enzymes [BR:smo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SELMODRAFT_443461
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     SELMODRAFT_443461
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 AP2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 9638767
NCBI-ProteinID: XP_002977127
JGI: 443461
UniProt: D8S1N7
LinkDB
Position
Unknown
AA seq 1386 aa
MAPRKGVAAAAAGKQQDQGAHFRGVRKRPWGRYAAEIRDPWKKVRVWLGTFDTAEEAARA
YDNAARALRGAKAKTNFSTMSPSLYPGGAGGGGGGGGGAGMGGGDDRQSTSHSSTVESYN
TPTPVVKKNKAAVVAAAAAAAVDTMTMTINNTSNCYTSSCGNHRAGMVENGDFTKNVIAS
TVKNSNKRIFQPASHTLKDFKATAAICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDY
LLTRRSYAGLDAPVKTAVDKFQLLPAFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEK
ITSDVDPNFYIKYACDTFQYFTNILFRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYS
APISVDIEYTRGKDIITRKGKDGQGAQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLD
PGGYFVVKGTEKVILIQEQLSKNRIIIDSDSTGSVTASVTSSTHERKSKTNIIIKHEKIY
VKLNVFSDDVPIVVVMKAMGMESDQEIIQMVGTDPKFAGILAPSMQECASLGVYTTHQAL
EYLGTKVRVNRQWGSKQTKSKVDEARDILLNVFLAHVAVHRYDFRPKCIYVALMLRRMLE
AILDKECVDDRDYVGNKRLELAGQLLALLFEDLFKRSCSELKSNVDRTLSKMNRASQYDV
SKSLKPDMLTSGLENAISSGNWTVKRFRMDKKGVTQVVSRLSYIAALGHMTRVASQFEKS
RKWGMLCPCDTPEGEGCGLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHS
KNAFLVMFNGTILGIHRRPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVC
RPVVIADHGVSRIKEHHMKELKDGFRTFDDFLREGLVEYLDVNEENNALIALYEKEADST
TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRIDTLLYLLV
YPQRPLLTTKSIELVNYDKLGAGQNASVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLK
KFSCLVRKYENRTMDRIVAPRQHGHATSQLLDQDGIASVGERIYDKDIFVNKESPKDVKT
TFLNPLALPDSAYRPTPQRYKGPLGESAIVDKVLLTTNESQQMVIKCQVRHTRRPELGDK
FSSRHGQKGVCGTIVEQQDFPFTERGVCPDLIMNPHGFPSRMTVGKMIELLGGKAGVQSG
KYHYGSAFGEPSGHADTVEAISATLVKHGFSYCGKDLIYSGITGCPLQAYIYMGPIYYQK
LKHMVLDKMHARAQGPRVVLTRQPTEGRSREGGLRLGEMERDCLVAYGSSMLILERLMIS
SDQFQVQVCTNCGLLGYYSHKLKMNFCSYCKNGENMAAMKLPYACKLLFQELQSMNIVPR
LQLAEA
NT seq 4161 nt   +upstreamnt  +downstreamnt
atggcgcccaggaagggtgtggcggcggcggcggcggggaagcagcaagatcaaggggcg
catttccgtggcgtgaggaagcggccatggggccgatacgcggcggagatcagagatcca
tggaagaaggtgagggtatggctggggacgttcgataccgcggaggaggcggcgcgggcc
tacgacaatgcggcccgggcattgcgaggcgcaaaggccaagaccaatttctcgaccatg
tcgccatcgctctaccctggcggcgctggtggcggtggcggcggcggtggcggtgctggt
atgggcggcggcgatgatcgccagagcaccagccacagcagcacggtggaatcttacaac
acgcccacgccagtcgtcaagaagaacaaggcggcggtagtggcggcggcggcggcggcg
gcggtggacaccatgacaatgacgattaacaacacgagcaattgctacacgagtagctgc
gggaatcatcgggcagggatggtggagaatggcgatttcaccaagaacgtcatcgccagc
accgtcaagaacagcaacaagaggatcttccagccagccagccacacactcaaagatttc
aaagccacagccgcaatttgtttatacaaagaagaggaggaggagaaaatcacaaatcca
tcaccacagcaccacaagaacaccatgagaaaaagtttcttccaagaaccaagagactat
ttactaactaggaggagctacgctggattggatgcgccagtgaaaactgctgtggacaag
ttccagcttcttccagcgtttcacaaggtccggggtcttgtgaagcagcacctcgattca
tacaattactttgtgaattgcgagatcaagaagatcatccatgccaaaggaaacgagaag
atcactagcgatgtcgatcccaacttttacatcaagtatgcttgtgacacctttcaatac
ttcacgaacatcctcttcaggtttttggacattttcgttggaacaccatcgatcgagcaa
gactacattcggcaggatattaccccgcagcagtgccgcttgcgagatatgacgtattct
gcccctatcagtgttgatatcgagtacacaaggggcaaggatatcataactcgcaaggga
aaggatggccagggagcacaagtaattggacgcatgccagtgatgctaaggagctctcgt
tgcattcttactggaaaatctgatgctgaacttgcgaagcttggagaatgcccgctcgat
cccggtggctattttgttgtgaaaggaacagagaaggtgattttgattcaagaacaactt
tccaagaacaggatcatcattgactctgatagcactgggagcgtcacagcctctgtcact
agcagtacacatgagaggaaaagcaagacgaatatcatcataaagcatgaaaaaatctat
gtaaagctaaacgtgttcagcgacgacgttcccatagttgtggtcatgaaagctatggga
atggagagtgaccaagagattatacagatggtcgggacggatccaaagttcgctgggata
cttgctccttccatgcaggaatgtgcttcgttgggtgtatacacaactcatcaagctctt
gagtaccttggaacaaaggtcagggtaaatagacaatggggcagcaagcaaactaagtct
aaggttgatgaagcccgtgatatcttgttaaacgtttttctggcccatgtagctgttcat
agatacgatttccggccaaagtgcatctatgtggcactgatgctcaggcggatgctagaa
gcgattcttgataaagagtgtgtagacgacagggactatgttggaaacaagcgactggaa
ctcgctggccagcttcttgctttgctgtttgaggatctcttcaaaaggtcttgtagtgag
ctgaagagcaatgtggatcgcacactatccaaaatgaaccgtgcctctcaatacgacgtt
tcgaagtcattgaaaccagacatgcttacaagcggactggaaaatgcaatctctagtggc
aattggacagtaaagcgattcaggatggacaagaaaggtgtcacgcaggtagtgtcgagg
ctctcatatatagctgctctaggccatatgacgagagtggcgtctcagtttgagaagtcg
agaaaatggggtatgttatgtccttgtgacactcctgaaggtgaaggttgcggtctcaca
aaaaacttggcactaatgacacatatcacgactgatgatgaggaagcgcctctgattgac
ctgtgcaccaatttgggagtggaggatatcaacctcctgtccggagaagagtttcactct
aaaaacgcgtttcttgtaatgttcaacggtacgattctcggtattcatcgccgcccgcag
caatttgcgacgttgatgaggaagcttcgacgggcaggaaagattggagaatttgtcagc
attttcgttaatgaaaagcagcgctgcatttatattgcttcagacggtggacgagtctgc
aggcctgtggtgatcgcagaccatggtgtatcaagaatcaaggagcatcacatgaaggag
ttaaaggatggctttcgtacattcgatgatttcttaagagaaggactcgttgagtatctg
gacgtcaacgaagaaaacaatgctctgatagcactttatgaaaaagaagcagactctacg
accactcatatagagatcgagccttttacaattcttggcgtatgtgctgggctgatccct
tatccccatcacaatcaatcgccacgtaatacttaccagtgtgctatgggaaaacaagcg
atgggtaatatagcctataatcagcttcaaagaatagacacgctactctaccttttggtc
tatccgcaacgtccacttctcactaccaaatcaattgagctggttaactatgacaaactt
ggtgctggtcaaaatgcaagcgtcgcggttatgagctacagtggttatgatattgaagat
gcaattgtcatgaacaaggcctcacttgacagaggatttgggcgttgcatcgttttaaaa
aagttcagttgcctggttagaaagtatgaaaaccgtacaatggatcggattgttgctccg
cgacagcatggtcatgcgacgtcacagttgcttgatcaagatggtattgcttctgttggg
gagagaatttacgataaggacatattcgtgaacaaagagagcccgaaggatgtgaagacc
actttcttaaatcctctagctttgcctgacagtgcctataggcctactccccagcgttac
aaaggacctcttggcgaaagtgcaatcgtcgacaaggttttgctgactacaaacgaaagt
cagcagatggttatcaagtgtcaagttcgacacacacggcggcccgagcttggagacaag
tttagcagcaggcatgggcaaaaaggtgtatgtggaactatagtggagcaacaggacttc
ccgttcacagagcgtggtgtatgcccggaccttatcatgaatcctcacggatttccaagt
cgtatgaccgtgggaaagatgattgagctgcttggaggaaaagcaggcgttcaaagtgga
aagtaccattatggtagcgctttcggtgaacccagtggccatgctgatactgtagaagcc
ataagtgccacccttgtcaaacatgggttcagctactgtggtaaagaccttatctattca
ggtatcactgggtgtcctttgcaagcatacatctacatgggtccgatttactaccaaaag
ctaaaacacatggttttggataaaatgcacgctcgggctcaaggccctcgtgtagtattg
acaaggcagcctactgaaggaagaagccgagagggaggtctgaggctgggggaaatggaa
cgggactgcctcgtcgcgtacggctcaagcatgctcatactggagcgtttgatgatttcc
agcgaccagtttcaagtgcaggtgtgcacaaactgcggtttgctgggctattacagccac
aaactaaaaatgaacttctgctcgtactgtaaaaacggagagaacatggccgcgatgaag
ctaccgtatgcatgcaaattactgttccaagagctccagtctatgaacatagttcctcgt
ctgcaactggccgaagcatga

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