Selaginella moellendorffii: SELMODRAFT_443461
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Entry
SELMODRAFT_443461 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
smo
Selaginella moellendorffii
Pathway
smo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SELMODRAFT_443461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_443461
Enzymes [BR:
smo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SELMODRAFT_443461
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
SELMODRAFT_443461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
AP2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
9638767
NCBI-ProteinID:
XP_002977127
JGI:
443461
UniProt:
D8S1N7
LinkDB
All DBs
Position
Unknown
AA seq
1386 aa
AA seq
DB search
MAPRKGVAAAAAGKQQDQGAHFRGVRKRPWGRYAAEIRDPWKKVRVWLGTFDTAEEAARA
YDNAARALRGAKAKTNFSTMSPSLYPGGAGGGGGGGGGAGMGGGDDRQSTSHSSTVESYN
TPTPVVKKNKAAVVAAAAAAAVDTMTMTINNTSNCYTSSCGNHRAGMVENGDFTKNVIAS
TVKNSNKRIFQPASHTLKDFKATAAICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDY
LLTRRSYAGLDAPVKTAVDKFQLLPAFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEK
ITSDVDPNFYIKYACDTFQYFTNILFRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYS
APISVDIEYTRGKDIITRKGKDGQGAQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLD
PGGYFVVKGTEKVILIQEQLSKNRIIIDSDSTGSVTASVTSSTHERKSKTNIIIKHEKIY
VKLNVFSDDVPIVVVMKAMGMESDQEIIQMVGTDPKFAGILAPSMQECASLGVYTTHQAL
EYLGTKVRVNRQWGSKQTKSKVDEARDILLNVFLAHVAVHRYDFRPKCIYVALMLRRMLE
AILDKECVDDRDYVGNKRLELAGQLLALLFEDLFKRSCSELKSNVDRTLSKMNRASQYDV
SKSLKPDMLTSGLENAISSGNWTVKRFRMDKKGVTQVVSRLSYIAALGHMTRVASQFEKS
RKWGMLCPCDTPEGEGCGLTKNLALMTHITTDDEEAPLIDLCTNLGVEDINLLSGEEFHS
KNAFLVMFNGTILGIHRRPQQFATLMRKLRRAGKIGEFVSIFVNEKQRCIYIASDGGRVC
RPVVIADHGVSRIKEHHMKELKDGFRTFDDFLREGLVEYLDVNEENNALIALYEKEADST
TTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLQRIDTLLYLLV
YPQRPLLTTKSIELVNYDKLGAGQNASVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLK
KFSCLVRKYENRTMDRIVAPRQHGHATSQLLDQDGIASVGERIYDKDIFVNKESPKDVKT
TFLNPLALPDSAYRPTPQRYKGPLGESAIVDKVLLTTNESQQMVIKCQVRHTRRPELGDK
FSSRHGQKGVCGTIVEQQDFPFTERGVCPDLIMNPHGFPSRMTVGKMIELLGGKAGVQSG
KYHYGSAFGEPSGHADTVEAISATLVKHGFSYCGKDLIYSGITGCPLQAYIYMGPIYYQK
LKHMVLDKMHARAQGPRVVLTRQPTEGRSREGGLRLGEMERDCLVAYGSSMLILERLMIS
SDQFQVQVCTNCGLLGYYSHKLKMNFCSYCKNGENMAAMKLPYACKLLFQELQSMNIVPR
LQLAEA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaggaagggtgtggcggcggcggcggcggggaagcagcaagatcaaggggcg
catttccgtggcgtgaggaagcggccatggggccgatacgcggcggagatcagagatcca
tggaagaaggtgagggtatggctggggacgttcgataccgcggaggaggcggcgcgggcc
tacgacaatgcggcccgggcattgcgaggcgcaaaggccaagaccaatttctcgaccatg
tcgccatcgctctaccctggcggcgctggtggcggtggcggcggcggtggcggtgctggt
atgggcggcggcgatgatcgccagagcaccagccacagcagcacggtggaatcttacaac
acgcccacgccagtcgtcaagaagaacaaggcggcggtagtggcggcggcggcggcggcg
gcggtggacaccatgacaatgacgattaacaacacgagcaattgctacacgagtagctgc
gggaatcatcgggcagggatggtggagaatggcgatttcaccaagaacgtcatcgccagc
accgtcaagaacagcaacaagaggatcttccagccagccagccacacactcaaagatttc
aaagccacagccgcaatttgtttatacaaagaagaggaggaggagaaaatcacaaatcca
tcaccacagcaccacaagaacaccatgagaaaaagtttcttccaagaaccaagagactat
ttactaactaggaggagctacgctggattggatgcgccagtgaaaactgctgtggacaag
ttccagcttcttccagcgtttcacaaggtccggggtcttgtgaagcagcacctcgattca
tacaattactttgtgaattgcgagatcaagaagatcatccatgccaaaggaaacgagaag
atcactagcgatgtcgatcccaacttttacatcaagtatgcttgtgacacctttcaatac
ttcacgaacatcctcttcaggtttttggacattttcgttggaacaccatcgatcgagcaa
gactacattcggcaggatattaccccgcagcagtgccgcttgcgagatatgacgtattct
gcccctatcagtgttgatatcgagtacacaaggggcaaggatatcataactcgcaaggga
aaggatggccagggagcacaagtaattggacgcatgccagtgatgctaaggagctctcgt
tgcattcttactggaaaatctgatgctgaacttgcgaagcttggagaatgcccgctcgat
cccggtggctattttgttgtgaaaggaacagagaaggtgattttgattcaagaacaactt
tccaagaacaggatcatcattgactctgatagcactgggagcgtcacagcctctgtcact
agcagtacacatgagaggaaaagcaagacgaatatcatcataaagcatgaaaaaatctat
gtaaagctaaacgtgttcagcgacgacgttcccatagttgtggtcatgaaagctatggga
atggagagtgaccaagagattatacagatggtcgggacggatccaaagttcgctgggata
cttgctccttccatgcaggaatgtgcttcgttgggtgtatacacaactcatcaagctctt
gagtaccttggaacaaaggtcagggtaaatagacaatggggcagcaagcaaactaagtct
aaggttgatgaagcccgtgatatcttgttaaacgtttttctggcccatgtagctgttcat
agatacgatttccggccaaagtgcatctatgtggcactgatgctcaggcggatgctagaa
gcgattcttgataaagagtgtgtagacgacagggactatgttggaaacaagcgactggaa
ctcgctggccagcttcttgctttgctgtttgaggatctcttcaaaaggtcttgtagtgag
ctgaagagcaatgtggatcgcacactatccaaaatgaaccgtgcctctcaatacgacgtt
tcgaagtcattgaaaccagacatgcttacaagcggactggaaaatgcaatctctagtggc
aattggacagtaaagcgattcaggatggacaagaaaggtgtcacgcaggtagtgtcgagg
ctctcatatatagctgctctaggccatatgacgagagtggcgtctcagtttgagaagtcg
agaaaatggggtatgttatgtccttgtgacactcctgaaggtgaaggttgcggtctcaca
aaaaacttggcactaatgacacatatcacgactgatgatgaggaagcgcctctgattgac
ctgtgcaccaatttgggagtggaggatatcaacctcctgtccggagaagagtttcactct
aaaaacgcgtttcttgtaatgttcaacggtacgattctcggtattcatcgccgcccgcag
caatttgcgacgttgatgaggaagcttcgacgggcaggaaagattggagaatttgtcagc
attttcgttaatgaaaagcagcgctgcatttatattgcttcagacggtggacgagtctgc
aggcctgtggtgatcgcagaccatggtgtatcaagaatcaaggagcatcacatgaaggag
ttaaaggatggctttcgtacattcgatgatttcttaagagaaggactcgttgagtatctg
gacgtcaacgaagaaaacaatgctctgatagcactttatgaaaaagaagcagactctacg
accactcatatagagatcgagccttttacaattcttggcgtatgtgctgggctgatccct
tatccccatcacaatcaatcgccacgtaatacttaccagtgtgctatgggaaaacaagcg
atgggtaatatagcctataatcagcttcaaagaatagacacgctactctaccttttggtc
tatccgcaacgtccacttctcactaccaaatcaattgagctggttaactatgacaaactt
ggtgctggtcaaaatgcaagcgtcgcggttatgagctacagtggttatgatattgaagat
gcaattgtcatgaacaaggcctcacttgacagaggatttgggcgttgcatcgttttaaaa
aagttcagttgcctggttagaaagtatgaaaaccgtacaatggatcggattgttgctccg
cgacagcatggtcatgcgacgtcacagttgcttgatcaagatggtattgcttctgttggg
gagagaatttacgataaggacatattcgtgaacaaagagagcccgaaggatgtgaagacc
actttcttaaatcctctagctttgcctgacagtgcctataggcctactccccagcgttac
aaaggacctcttggcgaaagtgcaatcgtcgacaaggttttgctgactacaaacgaaagt
cagcagatggttatcaagtgtcaagttcgacacacacggcggcccgagcttggagacaag
tttagcagcaggcatgggcaaaaaggtgtatgtggaactatagtggagcaacaggacttc
ccgttcacagagcgtggtgtatgcccggaccttatcatgaatcctcacggatttccaagt
cgtatgaccgtgggaaagatgattgagctgcttggaggaaaagcaggcgttcaaagtgga
aagtaccattatggtagcgctttcggtgaacccagtggccatgctgatactgtagaagcc
ataagtgccacccttgtcaaacatgggttcagctactgtggtaaagaccttatctattca
ggtatcactgggtgtcctttgcaagcatacatctacatgggtccgatttactaccaaaag
ctaaaacacatggttttggataaaatgcacgctcgggctcaaggccctcgtgtagtattg
acaaggcagcctactgaaggaagaagccgagagggaggtctgaggctgggggaaatggaa
cgggactgcctcgtcgcgtacggctcaagcatgctcatactggagcgtttgatgatttcc
agcgaccagtttcaagtgcaggtgtgcacaaactgcggtttgctgggctattacagccac
aaactaaaaatgaacttctgctcgtactgtaaaaacggagagaacatggccgcgatgaag
ctaccgtatgcatgcaaattactgttccaagagctccagtctatgaacatagttcctcgt
ctgcaactggccgaagcatga
DBGET
integrated database retrieval system