Selaginella moellendorffii: SELMODRAFT_443763
Help
Entry
SELMODRAFT_443763 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
smo
Selaginella moellendorffii
Pathway
smo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SELMODRAFT_443763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_443763
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_443763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
9653243
NCBI-ProteinID:
XP_002978227
JGI:
443763
UniProt:
D8S471
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MDSALAQLKLEALLAEIRVDYGDLEPAVDAAIEAVKDALMKIPEEKVPRSLASGFLDDLG
VPEDRSLLEFKRPESFTLVGSYSTRTMARPATVVDLAMRIPKACFYEKDYLNHRYHAKRA
LYLAYVFKILSKCGFFKSIEWAFLHHDARKPVLVLHTASGMFDLRVIPTISSNVFDISKL
DDGRSNVHNEGTGEPLQATPSYNGSILEDMFVEELSTVEKNLLCHSRRLQEAVMLLKVWL
RQRSSYGQPDTMNGFLLSIMILHLSSVAGGQRLSNHMTALQNFRVSLEMIGNDLPCACNA
LGFRLELQGTERRPALTVDESRVLFPDTYGTNLLFRMTKNSLKELKLFAERTLEAITADS
GFQESFLAAVDFASYFDCQIRLEIDDTSKCDFSNDGAWRGSEGKAENVLSKALKDRTKLV
RVLRRTIASGWNPKKGLSKFLPSKIQIGAILNDIENAYRMVDVGPSADKKEESAKFRSFW
GKKAELRRFKDGTIAEAVGWECEPWKRHLIIARVSEYILIRHFAGAGPVETVSDQLDFSL
LDKNQDSIGSTPKILQALEEFTKRLKALALPLKISSVQPISAAFRHAAVYTPRPRHSTKG
GVVGVFLEPLEVMIQLEGSGRWPNDVIAIKKTKAAFCLKIADSMHKQWHLDSVVSEDAVD
ILMNGFAFRISIAYEKDPTLIKHKGMAAISNISIKDDLIFHSVHSSTLNGLQGRCPAYGP
TVRLAKRWIGAHLFSDVITEEAIELLVAYIFTRPQPMFPPSTRITGFLRFLRLLANYDWH
LSPLIVDINGDMSSKDRETVVAFFEATRRGEHADFYEGSKGPAMFIATSYDMQSVTSTRC
LPLKPALKRLVAYAKSSAALLTSNITGMDNRWQSLFRTPLNCYDAVLVLQRKSLPHPGRV
LFSPELGKLQAAFVCPDVRSHLAFRTNQLFVGFNPVVEFVQDIKAKFGDYYDVWYDVLGS
DVIGLTLQKQEVFVGTKRKRNDENSIVENLVSLGKGLVASIYLKVKEK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggattcggcgctggcgcagctcaagctcgaggcgctcctcgccgagatccgtgtcgat
tacggcgatcttgagccggcagtggatgcggcgatcgaagctgtcaaggatgctctgatg
aaaatcccggaggaaaaggttccaaggtcgctcgccagtggattcttggatgaccttggt
gttcctgaggacaggtctttgctcgagtttaagagacccgaatctttcactttagtcggt
agctactcaacacgaacaatggcaaggcctgctactgtcgtggatttggcgatgcgtatt
ccaaaggcttgtttctacgagaaggactaccttaaccatcgttaccatgctaagcgcgct
ctttacttggcgtacgttttcaagatcctttccaaatgtgggttttttaagagcatcgag
tgggcatttcttcaccatgatgcccgtaagccagtgttggttcttcacacagcctcagga
atgtttgaccttcgtgtgatacctacgatctctagcaacgtttttgatatctcgaaactt
gacgatggaagaagtaatgtgcataatgaagggactggagagccgcttcaggctacacca
agctataacggtagcatccttgaggacatgtttgtagaagaactcagcactgtggaaaag
aacttgttatgccattctagaaggttgcaagaggctgtgatgcttttgaaggtatggtta
cggcaaaggagctcttatggtcagccggatactatgaatggattcctcctatcgatcatg
attctccatttgagtagtgtagccggtggtcagcggctgtctaatcacatgacggccttg
caaaattttcgcgtttctttagagatgatcggtaatgacttgccttgtgcttgcaatgct
cttggcttcagactagaacttcaggggactgaaaggagaccagctctgacggttgacgag
tctcgagttctatttcctgatacatatggaacgaatcttttgtttcggatgacaaagaac
tcattgaaagagcttaagctttttgcggagcgtaccctcgaggccataaccgctgacagt
ggctttcaagagtcctttcttgcggcagttgactttgcatcttactttgattgccaaatc
aggctggaaatcgacgacacgtcgaaatgtgatttctctaatgatggggcgtggagagga
agtgaaggaaaggctgagaacgtcctaagtaaagctttgaaagatagaacaaaactagtg
cgagttctcaggagaactattgcgagcggctggaatccaaagaagggtctgtcgaagttc
ctgccctcgaaaatccagattggagctatactgaacgacatagagaacgcctacagaatg
gttgatgtggggccaagcgcagacaaaaaagaagagtcagcaaaatttcgatccttttgg
ggtaaaaaagccgagcttcgtaggttcaaggacggaacaattgcagaagcagttgggtgg
gagtgtgaaccatggaagcgtcatcttatcatagctcgagtttcggaatacatccttatc
aggcactttgctggcgcaggaccggttgaaacagtttctgaccaactagatttttcttta
ctagacaaaaatcaagattccatcggaagcacacctaagattttacaagcgctggaagag
tttacaaagcgcctcaaagcgcttgctcttcctttaaaaatttcctctgtacaacctatt
agcgctgctttcaggcatgctgcagtgtacacacctcggcctaggcattctaccaaggga
ggtgttgtaggcgtgtttttagaacctttggaagtaatgatacagttagagggatcgggt
cgatggccaaacgacgtgattgcaatcaagaaaacaaaagcggccttttgtttgaaaatt
gcggatagcatgcacaagcagtggcatctagattctgttgtatctgaagatgcagtcgac
attttgatgaatggctttgcatttcggatttctatagcctacgaaaaggatcccacgctt
ataaaacacaagggcatggcggctatcagtaatatcagtatcaaggatgatcttatattt
catagcgttcattccagcacattaaatggcttgcagggaaggtgtcccgcttatggtcct
actgtcaggcttgcaaagagatggattggtgcccatcttttctccgacgtcattacagag
gaggctattgagttgctggtcgcttacattttcactcgaccacagccaatgtttccacct
tcaacgagaattactggctttctgagatttcttaggttgctcgcaaactatgactggcac
ctttctcctttaattgtggacatcaacggagatatgtcttcgaaagatcgggagactgta
gtggcgtttttcgaggctactagaagaggtgaacacgccgacttctacgagggttcaaaa
ggacctgctatgtttattgccacatcgtatgacatgcagtcggtcacttctacaaggtgt
ttgcctttaaagccagctctgaaaaggcttgttgcgtatgccaaaagctctgcggcactg
ctgacgagcaatataactggaatggacaacagatggcagtcattgtttcgaactccactg
aattgttacgatgccgtccttgtcttgcaacggaaaagcttaccccacccaggccgtgtg
cttttctctcctgagttggggaagctccaagctgcgttcgtctgtccggatgttagaagc
catctcgcgtttcgcacaaaccagctatttgtcggtttcaatccagtcgtggagtttgtg
caagatatcaaggcaaaatttggtgactactatgacgtgtggtacgacgttttgggaagc
gacgtcatcggactcaccttgcagaaacaggaggtgtttgttggaactaaaagaaaacgt
aacgacgagaactctatcgtggagaacctcgtgagtttaggcaagggtcttgtggcgagc
atatacttgaaagtaaaggaaaagtaa
DBGET
integrated database retrieval system