Selaginella moellendorffii: SELMODRAFT_443867
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Entry
SELMODRAFT_443867 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10779
transcriptional regulator ATRX
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smo03000
]
SELMODRAFT_443867
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_443867
Transcription factors [BR:
smo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
SELMODRAFT_443867
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
SELMODRAFT_443867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SMP
Helicase_C
ADD_ATRX
HDA2-3
Motif
Other DBs
NCBI-GeneID:
9653687
NCBI-ProteinID:
XP_002978534
JGI:
443867
UniProt:
D8S513
LinkDB
All DBs
Position
Unknown
AA seq
1858 aa
AA seq
DB search
MGDPELQVKFNAGLAAARRVAALIVGQPFCASDCIKAENPLDDVKISLRSVREVPSIGER
SENGLLVEEQGKVCEEDECQEEKVSPQAQVKEEIRCEEQVDGNSCEIIRVDADEEKSCEL
VEKEDKACEVQREEGDGGVEKDSSEDECDGDGYMSESSSEGSKSDEEVTRMIDWLVEIES
ESADAQEHLEDESVKKVEEEVRLELSETLSGQELDMAVSCEMADYVSIWKKTLLELEEES
AKLQDRLEDAGVSLPDLFKAIEKQAAEGCMTDTWRNRAHWAGTQAPEDFAEVLHSAEKDL
DALRPVIRRRGKLVEEGASGFLERKVNDVDTVKGSTGWEAFDSAFQPKLSAVSLFESKKW
AAVYSASTPEQAARLGLKFPGVDKVDDIADIDQHVGMEAAALAEESEFGLTEHQKKTMKR
VREEDDVRQMQKKIGARRVNCGFGGAMASQVKSSTSDVNIITEPPAVLSRLQPDTIDLGT
AGDPQNTDELRLEDEQRQSHERQTGTDQAIADNVTTRNQSFINGTPSRSEEKVKKGVAPA
REGKDHIRNASSFGRPTTDGTEPMPVFMEQTVRDNETQAEAVADGSQCHDEAVETEEFKV
LKRSNSFKAIGVRTSSAGDDAKKPTPSMVIVVSDDDDDDPPADCGSTAQPRTVDQGKVPS
KDVTALDETTSPLKPLKRVTEHGSSSRCKRKRCFMVNSSEDEEDATSAKKEQSGLKSDRD
EQEERNSDSCDLSQSKLSGDTRRRLTRGNRSFGCTVCGETMSAKDVLSHPVLKVIICTSC
KQQYDDGPFRKDEDGSEAECRWCGEGGSLICCDSCDKVFCESCIGRNFGPAFLESIEDIS
WKCYLCDPSPLASLQQWLKVAEEEALKESLANLDVRRNRKKQRKNIRRVLRDDELDEVTK
QKLALEKERRERLAEWYAEARKGKSLSGKAANSEKAVEGTDGDDHICEGDCKTEGCVINI
ASRQTGEPLVRIPASISKHLKPHQLCGVRFMWDNCIESVEKVKSGDVGLGCILAHSMGLG
KTLQVIAFLYTVMRNVDLNFKTVLVVVPVNVLHNWKREFEKWRPAEVAPLEVSMLDTSRD
NATRASLLKSWKEKGGVMLIGYAAFRNLSTGSHVKDKETRDTLCKCLQDPGADIVVCDEG
HTIKNDKADITIALQRVKSGRRIAMTGSPLQNNLMEYYCMVDFVRPGFLGPQAIFRNKVQ
NPIANGQHADSTPDDVKKMKRTVHILHKRLSGFVQRRDMTVLKDELPPKCVWVISVRLSP
LQKQLYKKFLSLCETGRSKLFDHYHVLAKIWNHPDLLAIAKEQRLNEEFIVDSEKEDSAE
NGQGCPKRASPEADSFEWCEEILKESKRDVLENSGKMVLIMTLLSLNSSRGEKTLVFSQS
LHTLDLIENFLDTIPLGGSQDVWNKGREWLRLDGNTTASRRQQIADIFNDPNNTAIKCLL
ISTKAGSLGTNMTGANRVIIVDGSWNPTHDLQALFRAWRYGQTKPVFVYRLLAYGTMEEK
IYNRQLTKEGIAARVLDAHQVGRHLNADDLELMYTLDDDDDEEGTQLAGTEQQQQPGAKG
QKPKHKTFFVPSDAPPRDDHMAMLLLDFRPQWIAQYHEHEPLLEDLEEEKLTPEEMKTAW
DGYIIEHELQNRQIPSQSPTNYPPQSQYPASSTDVRPPFTATPSKAACNDVYHASLLESL
SIPVGGSVACATTNLSFRRLSHGGGDTYGDTRLYRKAEIIAMGIDDGATADANRPPPATI
AGALNSASQSLVGSKPLEASDARAIQSAEARATGIPAGVKGGVGAAAQHAVDKGEPVTVG
DVLRTPIPTGGDKIVTQADASRVQSAEQRNNPDSVVSPGGVAASMQSAADHNKAAGYA
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcccgagctccaggtgaagtttaatgccggcttggcggcggcgaggagagtg
gctgcgctgattgtagggcagccattttgcgcctcggattgcataaaggccgagaatcca
ctagatgatgtgaagatttctttgaggtcagtcagagaagtccccagtatcggtgagaga
agtgagaatgggctgcttgtcgaggagcaaggaaaagtttgcgaagaagatgaatgccaa
gaagagaaagtctcaccgcaagcacaagtcaaggaggaaatccggtgtgaagaacaagtc
gatggaaacagctgcgagatcatacgagtagatgcggatgaagaaaagagctgcgaactt
gtagagaaggaagacaaagcttgcgaagtccagcgggaagaaggagatggcggagttgaa
aaggacagctcggaggacgagtgcgatggcgatggatacatgtccgagagttccagtgag
ggctcaaagtctgacgaggaagtcacaaggatgatcgattggctggtggaaattgaaagt
gagtccgcggacgctcaagaacatttggaagacgaaagtgtaaagaaagtggaggaggaa
gtcaggctggagttgtctgaaacactctctggacaagaactggatatggcagtttcttgt
gaaatggcggactacgtttccatatggaaaaaaacgcttttggagcttgaagaggagagt
gcaaagcttcaggaccgccttgaagatgccggtgtgtctctaccggatctattcaaagct
attgaaaagcaggctgctgaagggtgtatgacggacacttggagaaaccgggctcactgg
gctggtactcaggcacctgaagattttgcggaagtgcttcattctgccgagaaagatttg
gatgctctgcggccggttataaggcgccgaggcaaacttgtagaagaaggtgcaagcggt
ttcctggaaagaaaagtgaacgacgtcgatactgtaaagggctccactggatgggaagct
tttgatagtgcattccagccaaaactgagcgcagttagcttgttcgagtcaaaaaaatgg
gctgcggtttactccgcctcgaccccggagcaagcagcgcgattgggcttaaagttccca
ggcgttgacaaggttgacgatattgcggacatagatcaacatgttgggatggaggcggcc
gctttggccgaagagagtgagttcggtcttacggagcatcagaagaagactatgaagcgg
gttagagaagaggatgatgtgcggcagatgcagaagaaaattggtgccagacgtgtcaat
tgcgggtttggaggggcaatggcatcacaagtgaagtcatcaacaagtgacgttaatatt
ataaccgagcctcctgcagtactatccagattgcagcccgataccattgatctggggact
gcaggggacccgcagaacacagatgaattgcgactcgaagacgagcaacgtcagagtcat
gagcggcaaacaggaacggaccaggcaatcgcggataacgtgacaactaggaatcagtca
tttattaatggaacgccgtcgcgcagcgaggaaaaagtgaagaaaggtgtggctccagcc
agggaaggaaaggatcatatacgcaatgctagctcttttggacgcccaaccacagatgga
acggagcctatgcccgtcttcatggaacagaccgtcagagataatgaaacacaggcagag
gcagtcgcagatggaagtcaatgccatgacgaagcagttgagactgaagaattcaaggtt
cttaaaagaagtaacagttttaaagccattggagtgaggacgagctcagcgggtgatgat
gctaaaaagccgactccttcgatggtcattgttgtcagcgatgatgatgacgacgatcca
cctgctgattgcggttcgactgcacaaccgagaacagtagaccaaggcaaggtgccaagt
aaagatgtcactgcgctggatgaaacgacttctccgttaaagcctttgaaacgagtgact
gaacatggttcttcatccagatgcaagagaaagcgttgtttcatggttaacagtagtgaa
gatgaggaagatgcgacctcggccaagaaggaacaatcgggattgaaaagtgatcgtgat
gagcaagaggaaagaaactcagacagctgcgatttaagtcagagtaagctgtccggggat
accaggagaaggttgacgagaggaaacaggagcttcgggtgcacagtatgcggcgagaca
atgtcggcaaaagacgtactgtcgcatcccgttctgaaagttataatttgcacctcctgt
aagcaacagtatgatgatggcccgtttcggaaggatgaagatggctcggaagcagaatgt
agatggtgtggtgaaggtggaagtctgatttgctgcgatagctgcgacaaggttttttgc
gagtcttgcattgggaggaatttcggacctgcgtttttggaaagcatagaagacatatcc
tggaagtgctacctttgcgatccatctcctttagcaagtttgcagcagtggctgaaagta
gcagaagaagaagccttaaaggaatcactagctaacttggacgtgaggcgtaatcgtaaa
aaacaacgaaagaacattcgcagggtgctgagagatgacgaattggacgaggttacgaaa
cagaagttggcacttgaaaaggaacgtcgagaacgcctagcagaatggtatgcagaagca
agaaaggggaagtctctctctgggaaagccgccaactcagagaaggctgtcgaagggaca
gacggagacgatcatatctgtgaaggtgattgcaaaactgaggggtgcgttatcaacatt
gctagcaggcaaactggtgaaccactggttcggattcctgcaagtatatcgaagcattta
aagccacaccagctgtgtggagtccgatttatgtgggacaactgtattgagtctgtggag
aaagtcaaatccggggatgtaggtttgggctgcatacttgcccacagcatgggacttgga
aaaacgctgcaggttatcgctttcttgtacacggtaatgagaaacgtggacttgaacttc
aaaaccgtgttggttgtggtccccgtaaatgttttgcataattggaagcgtgaattcgag
aagtggcggcctgcagaagttgcgcctctggaagtgtcgatgctagatacttccagggat
aatgcaactagagcgagccttctgaaatcctggaaggaaaagggaggtgtcatgcttatt
ggctatgcagcatttcggaatctttcgacgggaagtcacgtgaaggacaaggaaacaaga
gatactctatgcaagtgcctgcaggatcctggcgctgacatagttgtttgtgacgagggt
cacaccattaaaaatgacaaggcggacattaccatagcactccagcgagtgaaatctggc
cgccgaatagccatgacaggatctcctctacaaaacaatctgatggagtactattgtatg
gttgactttgtgcggcctgggtttctgggtcctcaagcgatctttcgtaacaaggtccag
aatccaatagcaaatggtcaacatgccgattctactccggacgatgtaaagaagatgaaa
cggacagtgcatattctgcataaacgtctgagcggattcgtgcaacgacgggacatgact
gtcttgaaagatgaactccctccaaagtgcgtatgggtgatctctgtccgcctgtctccc
ttgcagaaacagctatacaaaaagtttttgagcttatgcgaaactgggaggagcaaactc
ttcgatcactaccatgttctagccaagatatggaaccacccggatttgctagctattgca
aaagagcaacgattgaacgaggagtttattgtagactcggagaaagaagatagcgccgag
aatggacaaggatgtccaaagcgggcttcccctgaggctgatagtttcgaatggtgtgaa
gagattcttaaagagtcaaagcgggatgttttagaaaacagtggaaaaatggtcctgatt
atgacactgctctcactgaactcgtcgcgaggcgaaaagactctagtattcagccagagt
ttgcacacgctcgatttgattgaaaacttcttggatacaattccacttggaggtagccaa
gatgtttggaacaaagggagagaatggctaaggctcgatggcaacacaactgcgagtcgg
aggcagcagatagcggacattttcaacgatcctaacaacacagctattaagtgtcttcta
atttctaccaaggctggctcgctgggtactaatatgaccggcgctaaccgtgtcatcata
gttgatgggtcctggaatcctactcacgatttacaagctctttttcgagcatggagatat
gggcaaacgaagcctgtgtttgtctatcgattgctggcgtacgggactatggaagagaaa
atctacaatcgccaattaacgaaggaaggcatcgctgcgagggtgcttgacgcccatcaa
gttggcaggcatttaaacgcagacgacctggagcttatgtatactttggatgacgatgac
gacgaggagggaactcaattggccggaaccgagcagcaacagcagcctggtgccaagggt
cagaagcccaagcacaaaacgttttttgtgccctctgacgcccctccacgagatgatcac
atggcgatgcttctcttggactttaggccacagtggattgcgcagtatcacgaacacgag
cccctgttagaggacttggaggaggagaaactgacaccagaagagatgaagacggcttgg
gacgggtatataattgaacacgagctgcagaatcgacagataccaagccaatccccgacg
aactatccaccacagtcgcaatatccagccagcagcaccgatgttcgtcctcctttcact
gcgactccctccaaggcagcttgcaacgacgtttatcacgccagccttttggaatcactg
tccattcccgttggtggttccgtggcttgtgctacaaccaacttaagttttcgacgcttg
tcgcatggaggaggtgacacgtatggtgacacgcgtttgtacaggaaagcggagattata
gcgatggggattgacgatggtgcaactgctgatgctaaccggccaccacccgctactatt
gcaggcgctttgaattcggcctctcagtcgttggtgggatccaagcctctcgaggccagt
gatgctcgtgccatacaaagcgcggaagctcgagccactggaattccggccggcgtgaaa
ggtggtgtcggagctgctgcgcagcatgcagtggacaaaggcgagccggttacagtcgga
gacgtgcttcgtacaccaattccaacgggtggtgacaagatcgtcacgcaggctgatgct
tcacgagttcagagcgccgagcagcgaaacaatcccgacagcgtcgtttctccgggtggt
gtcgctgcgtcgatgcagtcggccgcggatcacaacaaggctgcaggatacgcttga
DBGET
integrated database retrieval system
