Selaginella moellendorffii: SELMODRAFT_444007
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Entry
SELMODRAFT_444007 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
smo03015
mRNA surveillance pathway
smo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SELMODRAFT_444007
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_444007
03015 mRNA surveillance pathway
SELMODRAFT_444007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_444007
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_444007
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SELMODRAFT_444007
Spliceosome [BR:
smo03041
]
Complex C
Other components
EJC/TREX
SELMODRAFT_444007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
9658691
NCBI-ProteinID:
XP_002978853
JGI:
444007
UniProt:
D8S681
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MKTPEQLKVTELKEELKRRGLSPKGLKKELVERLESALRDENVRAEAMARAQAQAQQQEE
AIAVKAAQEEIEVPPPVAEEEMDVPAPVAEETVSVLEETLVTTTTDEVSNVGEMDSFVKE
TVVEETVHVTNLNQPAPEETMVESVVTVEETTIKVVEEMPSMAAPMLEEEAKLEGGAVAA
EFLTPTGLEEGIKLEGEPVVEELAKGESFVVVEKTEEVVIKVDVEAKAESVEDVLAATQN
VLHEGLKEIASVEDLKNESVLQDETLEALKDMNEAVEDLKDAVEDEKEIVVEAMKDDKED
SKDRDSVEEDLKIKDSEKESMDNVDGDSKAMDVDAEAQAGLKRKDNGEQQVDQSKRQRRW
NSGKNMGADVETRPKVSPDLIVNDADRPARSVVSPLSDAANNGRIVSPSDKNPTTSLRID
RFVRPFTLKALKDLLADTGNFTDFWMDQIKTHCYVTYSSVDEAVATRNALHNLKWPVIGG
KQLVAEFVEPEEVKLKVESGSNDKPTVTIPRGCTTGGSAFPSPHTPVSPVAPPAHKEKPA
PPPKREAETMVTLDDLFKKTSAKPNIYYLPLTEAQVAAKAVAVAKS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcccgagcagctcaaggtgaccgagctcaaggaggagctgaaaaggcgcggc
ttgagccccaaggggctcaagaaggagctggtggagcggctggaatccgcgctgcgggat
gagaatgtcagggcggaggcgatggctcgcgctcaggcccaagcccagcagcaggaggaa
gcgattgcggtgaaggccgcgcaggaggagattgaagttccgcctccagtggcggaggag
gagatggacgttccggctccagtggcagaggagacggtttctgtgctggaagagactctt
gtcaccaccacgactgacgaggtttccaatgtgggtgagatggattctttcgtgaaggag
acggtggtggaagagactgtccatgtcacgaacttgaaccagccggctcccgaggagacg
atggtggagtctgtggtgactgtggaagagacgaccatcaaggtcgtggaggagatgcca
tccatggccgctcctatgctggaggaggaagctaagctcgaaggaggggctgtggcagcc
gagtttcttactcccacagggctggaagaggggattaagctcgaaggagagcccgtggtg
gaagagcttgctaaaggtgagagctttgtagtcgtggagaagactgaagaggtggttatc
aaagtggatgtcgaggcaaaggccgagagtgtggaggatgtccttgccgccacccagaat
gtgctgcacgaaggcttgaaggagatagccagtgtggaggacttgaagaacgaaagcgtc
cttcaggatgagactctggaggccttgaaggatatgaacgaggccgtcgaagacctgaaa
gacgcggtggaggatgagaaagagattgtcgtcgaagcgatgaaagatgacaaggaagac
tccaaggacagggacagtgtggaggaagacctgaagatcaaggacagtgaaaaggagagt
atggataatgtggatggtgattcgaaagccatggatgtcgatgctgaggcccaggcggga
ctgaagagaaaagataatggtgaacagcaagtagatcagagcaagaggcagcgcaggtgg
aattcagggaaaaatatgggggcagatgttgagacaaggcctaaagtatcgccagacttg
attgttaacgatgctgacagaccagcccgatcagttgtgtctcctctatcagacgcagcc
aacaacggacgtattgtgtcaccttcagataagaatcccacaacatctttgagaattgac
aggtttgtgcgcccttttaccctcaaggcgttgaaagatcttcttgcagacacaggcaac
tttacagatttttggatggatcagatcaaaacgcactgttatgtcacgtactcctctgta
gacgaagcagtagctacaagaaatgctctgcacaatctgaagtggcctgtgatagggggg
aaacagctagtggcagagtttgtagagcctgaggaggtgaagctcaaggttgagagtggc
agcaatgacaagcctaccgtgaccatccctcggggatgcactactgggggatcagctttc
ccgtctccacacacgccggtgtcgcctgtagctccaccagcgcacaaggaaaagccagca
ccaccaccaaagcgagaggctgagacgatggttactctcgatgatctgttcaagaagacg
agcgccaagcccaacatatactacttaccattgaccgaagcgcaagtagcagccaaggcg
gtagcggtggcaaagtcgtga
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