Selaginella moellendorffii: SELMODRAFT_444016
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Entry
SELMODRAFT_444016 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_444016
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SELMODRAFT_444016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_EF3_GNC1
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
9659783
NCBI-ProteinID:
XP_002978862
JGI:
444016
UniProt:
D8S6L4
LinkDB
All DBs
Position
Unknown
AA seq
2273 aa
AA seq
DB search
MSKYLSKDLAFVLKVTRCFRLYHQNYVRVFAAEAVSFVFRVAPLTQVIKGVRRLISETEK
DPTDEKTFGCSALLTCTLKGPSSGFHSRAEELLKLLFSPAVICGVREGSKGDIVLEILKK
TLTDLCEEIDPNKLELLWSCLLDEILSLLLLLEKESNWPDRSDARMEQLFLVLNHVSEYK
KGRYMNGQWLFNSIGPRLLDLVPKLTGEAHEGLLSQALAVLLNAIVKKADENIKPDVAAV
AWTSAFESASAKSLLPFIKGLLEQDVGTVKYFEHLILRVLEKHAEAHQACVLPLLLSLIQ
HWEFPSIKSEKLSAAVTGLVESSLEKLTSHHQTSEEAALVLTALRCFPYLATSSKPESFC
LDFATAIDQAVKENEKPDAGTWKELLGAALLSYLKVLEAQKKLTVEEFLSFLNFGLKYLG
YPDVLEAVSKCGLELRRLGTDVVKASVELNHQAFLKTCKLLEKNLWNPSKRIRMATLEIL
SVFEQSRESAQLLDDLLAIEATPLDIEHSRRLSSLILQVKLSLVGKPVELVRLAFHAVIG
VLHNRFTPLWEPVISCVAEIMEARGDNVRGDFTSYLSAIQNQCLQDSNGLHVQRRFPFSK
PCISEPSNVPESQMPSNLVGLLLRIAQRTSSNFVSVSNEMISLFLVFLNHKNGEESHSLT
KNDWKTILKEWLQLLVQLKNFTDLSNGVLLKQILEERFLVFNDADIQKKTLDCLLKWKGS
CLTTYKDHLYKLMSVDTIRDELGSWSISKEDQQVANEHRTELMPVLVRILYPKLSKRNAK
LGKSASHMRSSILTFLSCLEAKELETFFSLITRPLEAASSNVLLAVDQNEIKSPIDLVDK
KRVAGLPHKTKVGFLHLVKDILQVFDGERIEPYLPALMGIVFRLLEAASLSTVEEGISAD
EKPVSSGKDLRTLCLKVVSLLLNNFSNVSLEPKYWELFFQATERSIALLKDENTGDKPTA
LLSCFLAMSTNEDYASLLTTNKLVVPNIFSILLVKNLSSPVHMAVLSFIQNSLGRKGKTV
ELSVLPHLTVLLQGLTQQLVKQSTSKDWKAKHLKEQLHIIFSVSPYINDPLRASEFLDTL
LPFLKTKKPDPEVRLEVLKIVRELGHLFDPSCASKCVEALTPLLSSVACKTSRIILCESL
EKLAAGEPSFALMAEILVDLNSMSTSRLDECDYERRQAGYEKLTREFLSQVDSRQALLLL
SHLVFDLESEDMRYNASSCLVMFVKATGEGIFKDTIGHVVHEFLFSRITESIKSENAATR
REWLIVFRELVILPEVPMFSEYRCLCSSDVEGDFFSNIIHIQLHRRIKAMAKFRAGCTDS
QFSQRSLSKIFAPLFSHFLFESKDEGLVAATLETLGYIATQLQWSQAVNLVTDSFRLLRT
KNEHQKVLVRLICLLLERTQFSQIGDEESKFLEDKVLPQLSKLMLTNESVNVPVSVVAIK
VLKLLPEQAIRKHLPQLFQTITNFLKSRSQEIRDAARSSIVGMVEVLGAKYLQFTVKMLH
SSLKRGYEKHVLGYTLNTILIRLIPTLRVGDIDYCLEDMLKILEEEVFGEVAAEKEVEAL
ARKMKERKQARSYDSFRLIAQVMTFDTHIHRLLQSIREKTSSSLKVLAKVQLVLKNVTAG
IQENSSATDPQVLVFVRELVEELFKPKPDVTTTGDDGNSLHILAEFALNLLHDRLRRIQP
TPEEVSTLDSFVPLLAKCLSVKYTGVISESMRCLSILLKLPLSTITSAGGAIVSSVFSLA
GSSSTTDSPLMQACMKLLSVILRHCKSVTLSKAQVHDLLRLNIFVEIEKQSAQCLSLLKA
VVARKLVVPEIYDLMTRVQKLMITSQYPSTRQRCSEILLQFLLDYPLAAKRLQRHIDFLL
GNLGYEHVTGREAALEMLHTIIVKFPDPVLMEQAESFFLTLITRLANDKDDNVQVLLQTV
LRILMERVGAQMLEQMKGYLLSWMKSEKQGLWLPATQATGILVAVMDKNFERHLNDFWPA
IITILEQSAEAHWKESFHILLLIEKVFQRFPSRLSQETWTTIQDFLLHGHVSVRTVSARL
FGSYLENDDASLLNDLRWLFLFGAICCEQMASDVFDEELGGHVVKNLTTVAASLSVASLK
LDDMQDERVTKALTMLRQKAGTMDQLSKTLTKNDPLTLFLRRLERVSFEGSQAKCVLTWY
TSLVSRLGREASAAYLPNILSPLLKVERSTAPADLRAFAEGVREEIRELVGPESFATAYN
QVSLDVMQRKDNRKRAKSIAALVDPEKTARKKIKLGQKRGAQKKRKRIDYRKT
NT seq
6822 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtacttatcgaaggatttggcttttgttctaaaagtaacgaggtgttttcgt
ctttatcaccaaaattatgttcgcgtttttgcggcagaggctgtctcgttcgttttcagg
gttgctcctctaacccaagttataaaaggtgttcgacggcttatctcggaaacggagaaa
gatcctaccgacgaaaagacttttggctgcagtgcgttgctaacttgcacgctaaaggga
ccgtcgtctggcttccattctcgcgctgaagagctgttaaagctccttttcagtccagca
gtaatatgtggagttcgcgaagggtcgaaaggtgacatcgttctagaaatattgaagaag
actttgactgacctttgcgaagaaattgatcccaataagctggagctgctatggtcctgc
ttactagatgaaatactttcgcttctccttttacttgagaaggaatctaactggccagac
aggtcagacgctagaatggaacaacttttcttggttcttaaccacgtctctgagtataaa
aagggaaggtatatgaatggtcagtggctgtttaactctattggtccaaggctgctagac
cttgttccaaagttgacaggagaggcacacgagggcttgctatctcaagcccttgcagtt
cttcttaatgcaatcgtgaagaaggcagatgaaaacataaagccagatgtagctgctgtt
gcatggacgtcagcatttgaaagcgcatcagctaagagcctattgcctttcattaaagga
ctgcttgagcaagatgttgggaccgtaaaatattttgagcacttaattttaagagtgctt
gaaaaacatgctgaggctcatcaagcgtgcgttttgccattgctgctaagtttgattcaa
cactgggaatttccatccatcaaaagcgagaaactttccgccgctgtcactggccttgtc
gaatcttctttggagaaacttacgagtcatcatcaaacgtcagaagaggctgctctggtc
ttgacagctttacggtgtttcccatacttggccaccagtagtaagccggagtccttttgc
ctggattttgcaaccgctattgatcaggctgtaaaagaaaatgagaagccggacgctggt
acctggaaggaattgctaggagccgctttattatcttatctgaaagttttggaagcgcag
aagaaactcactgtagaagagtttctttccttcttaaatttcggtttgaagtacctcgga
tatcctgacgttctagaagctgtatccaagtgcgggttagaacttcgaaggttggggacg
gacgtagtcaaagcctccgtggaactcaatcatcaggcttttctgaaaacttgtaaatta
ttggagaaaaacctttggaacccgagtaagagaataaggatggcaaccttggagattcta
agcgtgttcgaacagtcacgtgagagtgctcagctccttgacgacttgctagcaatagaa
gccacgccactggatattgagcactctcgtcgcctttcttccctcatcttgcaagttaaa
ttgagcttggttggaaagcccgttgaacttgttcgtttggcttttcatgctgtgatagga
gtattgcacaatcggtttacaccattgtgggagcctgtcattagctgtgtggctgaaatt
atggaggcaaggggtgacaatgttcggggtgattttacatcgtacctttccgcgatacaa
aatcagtgtttgcaagactccaacggtttgcatgttcaacgtcgttttccgttttctaaa
ccttgcatttcagaaccatctaatgtaccggagtctcagatgccatcgaatttggtgggt
ttgcttttgcggattgcgcaaagaacgtcgtcaaatttcgtatcagtatccaacgagatg
atttctctttttcttgtgtttttaaatcacaagaatggagaggagagtcattctctgacc
aagaatgactggaagactatattgaaagagtggctgcagcttcttgttcaactgaagaac
ttcacagatctttcaaatggtgtgcttctgaagcaaatattggaggagaggtttctggtt
ttcaatgatgctgatattcaaaagaaaactttggactgcttattgaagtggaagggctcg
tgcttgactacatataaagaccatttgtataaacttatgtctgtggacaccatacgcgat
gaacttggatcttggagcatttcaaaagaagatcagcaagtggcgaatgagcacagaaca
gaattgatgcctgtcctggttagaattctctatcctaagctgtccaaacgaaatgctaag
ctgggaaagtcagcaagtcatatgcgttctagcatactcaccttcttatcctgccttgaa
gctaaggagctggagactttcttttcgctaattactcgtccactagaagcggcctcttca
aacgtgttgctggcggtcgaccaaaatgaaatcaaaagtccgattgacttggtggacaag
aagagggttgcagggttgccacacaaaacaaaggtcggctttctgcatttggtgaaagac
atattacaagttttcgacggagaacgcatcgaaccatatcttcctgcactgatggggatt
gtttttcggcttttggaagccgcctctctcagcacggtggaggaaggtatctctgccgat
gagaaaccggtctcttcgggcaaagatttgagaaccctttgtctcaaggtcgtttctctg
ctgctcaacaactttagcaacgtcagccttgagcccaagtattgggagctgttctttcaa
gcaactgaacgctcaatcgctttattgaaggacgaaaatactggagataagccaacagca
ttactatcgtgctttttagcaatgagtacgaatgaggattacgcttctcttttgacgacg
aacaagttggtggtgcctaatatcttttccattctgctcgtgaaaaacttatcgtcacca
gtacacatggctgttctgagttttattcaaaactcactcgggaggaaagggaaaacagtg
gaacttagtgtcttacctcatctgacagtgttattgcaaggccttacacagcaactagtc
aaacaatctacgagcaaggattggaaagcaaaacacttgaaggagcagctgcatatcata
ttcagtgtaagcccgtacataaatgatcctctacgggcctccgagtttctggatacattg
ttaccatttctgaaaacaaagaagcctgatccagaagtaaggcttgaagtgctgaagatt
gtcagagagttagggcatcttttcgacccttcttgcgcctcgaaatgtgttgaggcattg
acacctttactgtcatcagtcgcctgtaaaacgtcccggattattttatgtgaaagcctt
gagaaacttgcggcaggagagccttctttcgctttgatggctgaaatattggtggacctg
aactctatgtcaactagcagacttgatgaatgcgattatgaacgcagacaagcaggctat
gagaaattgaccagggaatttttgtctcaagtcgattctcgccaagccttgctacttctg
tcccaccttgttttcgatttggaatcagaagatatgcggtacaacgcatcgagctgcctg
gttatgtttgtcaaggctactggggaaggaatcttcaaagacaccatcggtcacgttgtt
cacgagtttcttttctcccgcattacagaatcgatcaagtcggaaaatgctgcgacacga
cgggaatggctgattgtatttcgagagctagtaatcctcccagaagttccaatgttttcc
gagtatcggtgcttgtgtagttccgatgtggaaggggacttcttcagcaatattattcat
attcagcttcatagacggattaaggctatggcaaagtttagagccggttgtactgattcc
cagttttcccaacggtcgttaagtaaaatatttgcgccgttattttcgcacttcctattc
gaaagcaaggatgaaggccttgtagctgcaactctcgagaccttgggatatattgccaca
cagttgcaatggtctcaagctgtcaaccttgtgaccgactcctttcgccttctcaggacg
aaaaacgagcaccaaaaggtcttggtgcggctgatatgtttgctgttagagcggacacaa
ttttctcaaatcggggacgaagaaagcaagtttttggaggataaagtccttccccagctc
tcgaagctcatgctgactaacgagtcggtgaacgttcctgtgagtgtcgtggccatcaaa
gtactcaagctgctgcccgagcaagcaattagaaaacatcttcctcagcttttccagact
ataacaaattttttaaagagcaggagtcaggaaattcgcgacgcagccagatcttctatt
gtcggcatggttgaagtactgggagccaagtacctccaatttacagtgaaaatgctccac
tcttctttgaaacgcggctatgagaagcacgtcctgggatacaccttaaacaccattctg
atcagacttattccgacgcttcgggtgggggacatcgattactgcttggaagacatgctg
aaaattctggaggaagaggtttttggcgaggtggccgcagagaaggaggtggaagctcta
gcaagaaaaatgaaggaaaggaagcaggcacgctcgtatgacagcttccggcttatagct
caggtgatgactttcgacactcacatccatcggcttctacaatctatcagagaaaaaacc
agctcttctctcaaggttcttgcgaaggttcagttggttcttaagaatgtcacagcaggg
attcaggaaaactcgtcggctactgatccacaggttttagtctttgtacgcgagcttgta
gaggagttgtttaagccaaagcctgacgtgactacgaccggtgacgatggcaactctttg
catatactcgctgagttcgcgttaaacttattgcacgacaggttaaggcgcatccagcca
acgccagaggaagtgtctacgctcgattcttttgttccgctactcgcgaagtgcctatcc
gtgaagtacaccggcgttatatccgagtctatgagatgcttgagcattctgctaaagctg
ccgctatcaactatcacttcggctggaggagcgatcgtaagctcagttttttcactcgct
ggcagttcctcgactactgacagcccgctcatgcaagcctgcatgaagcttttatctgtt
atcttacggcactgcaagagcgtaaccttgtcgaaggctcaagtacacgatcttctgcgt
ttgaacatcttcgtggagattgagaaacagagtgcccagtgtttatcgttactgaaggca
gtggtcgcaaggaagcttgtagtacccgagatttatgacttgatgacaagagttcagaag
ctgatgattaccagtcagtatccgtccactcgacagcggtgcagtgagattctactacag
ttcttgctcgactatccactcgctgcgaagcgcttacaacgtcatattgattttttgctg
ggaaatctcgggtatgaacatgtcactggtagggaagcagcactcgagatgctacataca
atcatcgtgaagtttcctgacccagttttgatggagcaagctgaaagctttttcctgacg
ctgatcaccaggctagccaatgacaaagacgacaacgttcaggttctattgcagacagtt
ctaagaatcctcatggaacgcgtaggagcacaaatgctcgagcaaatgaaaggatacttg
ctgtcttggatgaaaagtgaaaaacaaggcctttggttgccggctacacaggccaccggg
atacttgtggctgttatggacaagaattttgaacgtcacttaaacgatttctggcctgcg
attataacgatattggagcagtcggcggaggctcattggaaagaaagctttcacatacta
ctattgattgagaaagtattccaacgatttcccagtcgtttatcacaggaaacatggaca
acaatccaagatttcttactgcacggacatgtctcagtgcgaaccgtgtccgcacgatta
tttggttcttatctcgaaaacgatgacgcctccttgctcaacgatttgagatggctgttt
ctttttggggccatatgctgtgagcaaatggcgtcggatgtcttcgacgaagagctaggt
ggtcatgttgtgaagaacttgacaacagtggctgcgtccttaagcgtcgcctccctgaag
ctggatgacatgcaggacgaaagagtgaccaaggcattgacaatgttaaggcagaaagcg
ggaacgatggaccagctcagtaagacactgaccaaaaacgatcctcttactctctttctt
cggaggcttgagagagtttctttcgagggctcacaggcgaagtgtgtgttgacgtggtac
acatctttagtgagtcgacttggaagagaagcgtcagccgcgtatttgccaaatatactt
agtcccttgctgaaagtggaacgttcgactgctccagcggacctgagagcattcgccgag
ggagttcgggaggagattcgggagcttgtaggacccgagagttttgcgacggcctacaat
caagtctctcttgacgtaatgcaacgcaaggataaccgcaagcgtgcaaaatccatcgcg
gcattggtagaccccgagaaaaccgccaggaaaaagatcaagctgggccagaagagaggc
gcacagaagaagaggaaacgcatcgactacagaaagacgtga
DBGET
integrated database retrieval system