Selaginella moellendorffii: SELMODRAFT_444100
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Entry
SELMODRAFT_444100 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_444100
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
SELMODRAFT_444100
TFIIIC, fungi type
SELMODRAFT_444100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_9
TPR_19
TPR_16
TPR_11
TPR_1
TPR_8
TPR_12
TPR_CcmH_CycH
ARM_TT21_5th
TPR_20
TPR_17
ANAPC3
NatA_aux_su
ARM_TT21_4th
NatB_MDM20
Motif
Other DBs
NCBI-GeneID:
9660135
NCBI-ProteinID:
XP_002978980
JGI:
444100
UniProt:
D8S6F9
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MVAFARISRKSAVSWNAIVKAMGDFRGAIGQAEEMMLDLDGARLGFYSRAEAGIVDRAWQ
SIGPDFGLLEYGRMRDERQLPHRKRTFDRMLGDVVGDVEVDIDGDVEVDVDVSGLEQHDI
ADTTTSNAAPAEMDLEGFESVMVGECDDEQEEEVEEDEDEEEDEDYALRFEGDMDPLAFV
DVDQNGDLPYQQFERLEYEALAERKRKALAKKREEEEMNAKESQQDIFGADIDDIWNAFG
PKRRRRAGEAKRKGRKKVPGIPGASRLPPEVSRKLGEANLLYATRKNDEAIALLKEVVRL
APNAPDAYHTLGLLYDAMGDRKKALNFYMICAHLKPKDAALWKRLASWSTELGNTGQVIH
CLTKAIRADPDDIDAKWDRASLYAEILDFQKAADAFEQMLVLRSSDVEVCKMVAKMQHKN
GNIQRATEVLEKFIDEHSAEADFAAVNLLAELHMGNRNYAAALSQIDRARQMYCHGQALP
LDLSIKSGICHVHLGNLLAAERDFEDLRKEGLDDLADLVLDVGDTYLSVGRHHDALGYYI
ILEGNDAYDNGTLSLKIAECYMAVDALEDAIRVYYRVMEKLPQHVDARLTLASLLLRCSR
LDDAINLLKPPQVTDTSVSGLYWWQNGRIKMKLAEIYHGQGKLYLFLETILPAIQESLYV
ESFNQKVKGRKRLPKSVLAERAKLLEDKQDDEVFQGFGPIISRNDRAKASRAKKVLAKRA
AEKEEKKAAALAAGMEWESEEESDGAEAEMELKQSPLPNLLKDDEHYQTLLQACKALASI
QRYWEALEVIHHSLRVGNSLTPEQHDELRALGAQIAYKTSDARYGYECARYMVQQRPYSL
SMWNCYYQVVSRSEARVPRHHKFMLQMRNKFADCVPAMIICGHQFAMISQSQGALREYLQ
AYKQQPEDPFINLCVGVSFINLSQGFRLSNRNQCVLQGFAFLYKYQRLSNHNQESNYNIA
RAYHCVGLVHLAVTYYEKVLQHFEKDRPIVRLPYESSTFLSQDFVPEGRVGGHCDLRREA
AHNLHLIYKKSGSLHLARQVLMDYCRP
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcatttgccaggatctccaggaaatcggccgtttcttggaacgcgatcgtaaag
gcgatgggtgatttccgtggcgcgatcgggcaggcggaggagatgatgctggatctggat
ggagcgcgattgggattctattcgcgtgcagaagccgggattgtggatcgcgcatggcag
tccatcggcccggatttcgggctcttggagtatgggagaatgagggacgagcggcagctg
ccgcatcgcaagcgcacctttgatcggatgctgggggacgtcgttggcgacgtggaggta
gatatcgacggcgatgtggaggtggatgtggatgtgagtggattggagcagcacgacatc
gccgatactaccacgagcaatgcagccccggcggagatggatttggaggggtttgagtcc
gtcatggtgggggaatgcgacgacgagcaggaggaagaggtggaggaggacgaggacgag
gaggaagatgaagattatgcgctgcggtttgagggagatatggacccgctggcctttgtg
gacgtggatcagaatggtgatctcccctaccagcagtttgagaggctagagtatgaggca
ctggcggagcgaaagcgcaaggctctcgcgaagaagagagaagaggaggagatgaatgcc
aaagaaagtcagcaggacatctttggcgcagacatagacgacatttggaatgctttcggc
ccaaagcgaagaagacgagcgggagaggcaaagcggaaaggaaggaaaaaagttcctggc
attcctggtgcgtcgagattgcctccagaggtctcgaggaaactgggagaagctaacttg
ctttatgcaacgagaaagaacgacgaggcaatcgctctcctgaaagaagtggtgcgtctc
gctccaaacgctcctgatgcttatcacacgctggggctgctctacgacgcaatgggagac
cggaagaaggcgctaaacttctatatgatatgcgcgcacctcaagccgaaagacgctgct
ctgtggaagcggcttgcgtcctggtctactgagttgggaaatacaggacaagtgattcac
tgcctgaccaaagcaataagggccgatcctgatgacatagatgccaagtgggatcgtgcc
tcactatacgctgaaatacttgacttccagaaagcggccgacgcgtttgaacagatgctt
gttttgcgatcgagcgatgtagaagtttgcaaaatggttgccaagatgcaacacaagaat
gggaatatccaacgggcaacggaagtattagaaaagtttattgacgagcattctgctgaa
gcggattttgctgcggtgaatctcctggctgagcttcacatgggaaacaggaattacgct
gcagctctatctcagatagatcgtgcacgccaaatgtattgccatggacaggcactaccg
ctggacttaagcattaagtctgggatctgccacgttcacttgggaaatttactcgcagcc
gagagggacttcgaggatttacgtaaggagggtcttgacgatcttgcggacttggtgttg
gatgttggagatacctacctgagcgttggtagacaccacgacgctcttggatactatatt
attctggaaggcaacgatgcttatgataacgggaccctttcactgaaaattgctgagtgt
tacatggcggtcgacgcattggaagatgccatccgagtttactatagggtgatggaaaaa
ttgccacaacacgtagacgctaggctaacgctggcatctcttcttttgagatgttctaga
ctggatgatgcaataaatctgctgaagcctcctcaagttacagatacgtccgtctccggt
ctttactggtggcagaacggaagaataaagatgaagcttgcagaaatttatcatggccaa
gggaagctttatctgtttctggagaccatcttacctgcaattcaagaaagcctctatgtc
gagtcttttaaccaaaaggtgaaaggaagaaaacgcttaccgaaaagtgtcctagcagag
cgggcaaagctcttggaagacaagcaagacgacgaggtgtttcaaggctttggtccgatc
atttctcgtaatgatagggctaaagcatcaagagcaaagaaggtgttagcaaaacgcgca
gccgagaaagaggaaaagaaagcagcagcactcgctgctggtatggagtgggagtctgaa
gaagagtcggacggagcagaagctgaaatggaattaaagcaatcaccacttccaaatcta
ttgaaagacgacgaacactatcaaacgctgcttcaggcatgcaaggctttagcatccatc
caacgctattgggaagctttggaagtcatacatcactcgctaagggtgggaaattcgcta
acacccgagcaacacgacgaacttcgagccttgggagcccaaatagcttacaaaacaagt
gatgcaagatatggctacgagtgtgcgcgttacatggtccaacaacgtccatacagccta
agtatgtggaattgctactaccaagtcgtctcaaggtctgaagctcgcgtgccaaggcac
cacaagtttatgctccagatgcggaacaaattcgcggactgtgtccctgcgatgattatt
tgtggacaccagtttgctatgatcagccagtcacaaggcgctcttcgcgaatatctacag
gcttacaagcagcagccggaagacccgtttataaacctctgcgttggtgtgagcttcatc
aatctatcacagggctttagactgagcaatcgaaaccagtgcgtcttacaaggctttgct
ttcctctacaagtaccagcgtctctcaaatcacaaccaggaatcaaattacaacatcgcc
agagcctaccactgtgttggtctcgttcacttggccgtgacttactacgagaaagttctc
cagcactttgagaaagatcgacccatcgtccggctaccgtacgaatcgagtacgttttta
tcccaggattttgtccccgagggacgagttggcggccactgcgacctgagaagggaggcc
gctcacaacttacacctgatctacaagaagagtggctctctccatcttgcgaggcaagtt
ctcatggattattgtaggccataa
DBGET
integrated database retrieval system