Selaginella moellendorffii: SELMODRAFT_444188
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Entry
SELMODRAFT_444188 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
smo04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_444188
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
SELMODRAFT_444188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_444188
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_444188
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SELMODRAFT_444188
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
SELMODRAFT_444188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
YNR034W-A-like
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
9634114
NCBI-ProteinID:
XP_002979241
JGI:
444188
UniProt:
D8S7Q0
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MVVAPGRPMQLVVIVQLLMSNGQDAAAKRRCCVVRPPPRCPRRLEMEQGSSSRWAFRVRA
TIKPFASHATETIGSVAFDSSNELMATGGIARKIRVYDISAILDSEDKQQQDQAADEDDE
DGLEDEDEEGRFVSSRRRARNTFDTDRSSLSVICAPSRLSSLQWRPGKTGTIACGDYDGV
VTEWSVERQIPLVERDEHGGRHVWSVDYATDMSGVCVSASDDGTARVWQGGMERSALTIR
APDSKPFCCAEFDPLSSTLLALACADGKVYVHDLRRPECPVWTLAHHRRAASYARFLDRE
RLVTASVDSTICVWDLAAPPAPRVVESFSQHQNVRNFVGLSVWRKGEMVACGSETNQAYV
YQVGSGGGGDQSFVLRHQFSSSSWSSSTDSSSARRNSSLASAVCWMEDCSCTLAAANSEG
VLQILSGEFGGV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggtagtagcacctggaaggccgatgcaactggtggtgatcgtccagttgctaatgtcc
aatggacaagacgcggctgcaaagcgtcgatgctgcgttgtgaggcctcctccccggtgt
ccccggaggctggagatggaacaagggagctcctcgcggtgggctttccgggtgcgtgct
acgatcaagccttttgcgtctcatgcgaccgagaccatcggctcggttgctttcgacagc
tccaacgagttgatggcaacggggggtattgctaggaagatcagagtctacgacatctcg
gcgatcctggactccgaggacaaacagcagcaggatcaggctgctgatgaagacgatgaa
gatggtctcgaagacgaagacgaagagggccgcttcgtgagctctcgccggcgtgctcgc
aacactttcgacacggacaggagctctctgtctgtcatctgcgcgccgtcgaggctgagc
agcttgcagtggcggccgggaaagacagggacgatcgcatgcggggactacgacggggta
gtgacagaatggagtgtggaaagacaaatcccgcttgtggaaagagacgagcacggcggc
cggcacgtctggagcgtcgactacgcgacagacatgtcgggcgtgtgtgtgtcggcctcg
gacgacgggacggctcgggtgtggcaaggcggcatggaaaggtcagctctcacaattcgg
gcacccgactcaaagccgttttgctgtgcagagtttgatcctctctcgagcacgctgctc
gcgctcgcctgcgccgacggcaaagtttacgtgcacgacttgcgaaggcccgagtgcccg
gtgtggacgctggctcaccaccgccgggccgcgagctatgcacggtttctagacagggaa
aggctggtgaccgcgtccgtggatagcactatttgcgtgtgggacttggcggctcctccg
gctccgcgggtggtggagagctttagtcagcaccaaaacgtgaggaactttgtggggctc
tcggtgtggaggaagggagagatggtggcgtgtggatccgagacgaaccaggcatacgtc
tatcaggtcgggagcggtggtggcggtgatcaaagctttgttttgaggcaccagttctcg
tccagttcttggagttcttccacggattcctcctccgcgcggaggaactcgagcttggcg
agcgcggtttgctggatggaagattgctcgtgtactctcgcggctgcgaactcggaggga
gtgctgcaaatcttgtctggggagtttggcggtgtttag
DBGET
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