Selaginella moellendorffii: SELMODRAFT_444506
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Entry
SELMODRAFT_444506 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10691
E3 ubiquitin-protein ligase UBR4 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_444506
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_444506
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
SELMODRAFT_444506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
E3_UbLigase_R4
Motif
Other DBs
NCBI-GeneID:
9647709
NCBI-ProteinID:
XP_002980293
JGI:
444506
UniProt:
D8SA78
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
MARLSTGVTTRQYAEALTVVCFNQPGERNAFLRSLEYCGLRSSEYADHGFMLRDHLPPRR
ISPVKEIILVNLLKVISPDLPLAFALSRGWTTKQKLASRKRPAKILEVSDCELKKAEEQK
SSETVENTKQHSDISKPPNLYADCDATSADEDDDEGTSDGELTSLDREHDEDGINTERLL
ASRVCTFTSSGSSFMEQHWYFCYTCDLTVSKGCCSVCAKCLKPYSITDIESSKRLSLETA
LELKDPHRPAPMHIKQSQMENVGARHPVIAEHIILPALRIISQACTPPKTQTTEPGGFSA
KSVGSFVKTAAILQETPVTRPAKENVEKDKELENTPKGQDLLLVNYLEWKNGATYVEFVR
RLTISQNVKPAQKSRKDSRKSDALALKYILRWKRKACKVSLTEDLKCFEDSSWVRELVLS
ACSQPIRQEMCALIEVLCSQSVARKSKFLDLFMNLLPASRTAGESAAEYFDLLFKMIEDE
DARLYLTVRGFLRTACSLISEEVVRVEAQERSFHTDISQGYTLHKLIELLNKFLQVPNVR
IRFMKEDLLSQILEALLVIRGLVVQKTKLISDCGRLLRELLDNLLQESDDNKRHFVRACI
SGLQTPDHDRKDRRCLPAYMLVLNKAHTQEEFIRGSMTKNPYSSLEVGPLMRDVKNKICQ
QLEMIALFEDDYGMELLLAGSIISLDLSVAQAYEQGLDGEATEPMIKELDDDREESQDPE
IEFAITGVMLKELLSMVEHFTDEELKSGQEQVAFGVTGRLFFSLVPWMFSWRRNKSFSSA
ESVERLLLIVECLVTEANESDVGVTEGALSTTRAGIARGEQAAKGVLMFLERLSNPSSYK
QSKQHKNSDTAARILPYLTYGEEAAMEVLVDHFLPYLLDWGAFDKLQKEHGENPKDASLG
QKAAFHQFAVENFVKVTESIKQNDSGELLKNLILEKKILTVAIRYLKDAFPFTEKKTDLR
SSPEWTRSLELPSVPIILSMMRGLSIGHCKTQECLDEEEVLPLLHALEGMPGENEIGARA
ENLLDTLSDKETCGEGFLAETILNLRETTRDEMRRRALQRREELLQGLGMRRELRSDGGE
RIVISKPRIEGLEDVEEEEAGLACMVCREGYKLRMLGAYSYSKRVNIGSATVHGRPEWCH
QEEKRADASLKNPKKEWEGAAIRNNETLCNDLFPLRGPAVALAQYSRCVDTFWDNLNALG
RADGSRLRLLTYDIVLMLGRFATGASFSVDSKGGGKESNSRLLPFMVQMAGHLLDQQGPS
QRRVLAKSLQTFLQASPPETDATTTPVSRTISSPGTPARSDETVQYMMVQSLLLQSHDEW
QQHRKTASPLSASTSPSPAARNPIEFALSFSPAADIKRTASSGGLQATSTPSLSSEQLFS
ILQPMLVFIGIIDQLQRFFKSRSGSAVANRSSSGSSSSAGGTTDDGTEAWEATMKEKLRD
VSAMLAFSKDLLEWLEDMQSSADLQEALDVMGALGDAFSAGFSSCDEFFRDALGLASL
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggctgagcactggcgttaccacgcgccagtacgctgaagctctgacagtggtg
tgtttcaatcagccaggcgaacgaaatgcattcttacggagcctggagtactgtggtttg
cgatcatcggaatatgcagatcatggtttcatgcttcgtgaccatctcccaccacgaaga
atatctcctgtgaaggaaattattcttgtcaacctgctcaaagtcataagccccgacttg
ccactcgcattcgctctatccagagggtggaccacgaagcagaaactcgccagtcgcaaa
cgtccagcaaagatcttggaagtttcagactgtgagctgaagaaggccgaggagcagaaa
agcagcgagactgtcgaaaacacaaagcagcattcagacattagcaagccaccgaatctg
tatgccgactgtgatgctacctctgccgacgaagacgatgacgaggggacatctgatggt
gagctaacaagcctggatcgagagcacgacgaagacggcatcaacactgagaggcttctt
gcttctagagtttgcaccttcacatcaagtgggagcagttttatggagcagcactggtac
ttctgttacacttgcgacttgacagtgtccaagggatgctgctcagtatgtgcaaagtgc
ctcaagccatacagtatcaccgatattgagtcgagcaaaaggctttcacttgaaacagca
ctcgaattgaaagaccctcacagaccagctccaatgcacatcaaacaatctcagatggag
aacgttggagcgcgacatccagttattgccgagcacatcattcttccagctttgagaatt
atttctcaggcatgcactcctccaaagactcagactactgaacctggagggttctcggcg
aagtctgttggttctttcgtgaagacggctgcaatacttcaggagacaccggtcaccagg
cccgccaaggaaaacgtagagaaagacaaagagctggagaacacaccgaaaggccaggat
ttactactagtaaactacctggagtggaaaaatggtgcgacgtatgttgaattcgtgaga
cgactgaccatatctcagaacgttaaacccgctcaaaaatctcgaaaagactcgagaaaa
tctgatgccttggctcttaaatatatcctacgatggaagcgaaaagcttgcaaagtttct
cttaccgaggacctcaagtgctttgaagatagtagctgggttcgtgagcttgttctaagt
gcatgctcccagccaattcgtcaagagatgtgcgctttgatcgaggtgctgtgctctcag
agcgtggctcggaaatccaagttcctggacctgtttatgaacctgctgcctgcttcgaga
actgccggagagagtgcagcggaatactttgatctgctgttcaaaatgatcgaggatgaa
gatgcgcgcttatatcttacagttcgtggctttctgcggaccgcttgcagtcttatcagt
gaagaggtagtccgggtagaagcccaggagcgaagcttccatacggacatctcacagggc
tatactctacacaaacttatcgagctactgaacaaattcctgcaagttccgaacgttagg
ataaggtttatgaaggaagacttgctgtcacaaattttggaagctcttttggtgatcaga
ggtctggttgttcaaaagacgaagctgataagtgactgtggacggttactacgcgagctt
cttgacaacctgcttcaggaaagcgacgacaacaagagacatttcgttcgtgcatgtatt
tccggtcttcagactcctgatcacgacagaaaagatcgcagatgtctgcctgcatatatg
cttgttctcaacaaagctcacacgcaagaggagtttatccgtggctcgatgacgaagaat
ccatactcgagcttagaagttggtccacttatgcgtgacgtgaagaacaaaatctgtcaa
cagctggagatgattgcacttttcgaggatgactacggcatggagcttcttcttgcagga
agcatcatctctttagatctcagtgttgcgcaggcatatgagcagggactggacggtgag
gcaacagaaccaatgatcaaggagctagatgatgatagagaggaaagtcaggatccagaa
atcgagtttgcaattactggagtcatgctgaaggagctactgagtatggttgagcatttt
acggacgaagaactgaagtctggtcaggaacaagttgcattcggggtaaccggcaggctc
ttcttcagcttggtgccttggatgttctcctggagacggaacaaatccttctcttcagcc
gaatctgtggagcgactgctactcatcgtggagtgtctggtcaccgaggccaacgaaagt
gacgttggagtgaccgaaggcgctctgagcacaacaagagccggcattgccagaggggaa
caagctgccaagggtgttctaatgttcctggagcgactctccaatcccagcagctacaag
cagtctaagcagcacaagaacagtgacacagccgcaagaatactaccgtatctaacttat
ggagaggaagcggcaatggaagtattggtggatcacttcctgccttacttactggactgg
ggagcttttgataagctgcaaaaggagcacggtgagaatccaaaggacgcttcactgggt
cagaaagcagcctttcatcagttcgctgttgagaattttgtgaaggtaacggagtcgatc
aagcaaaacgacagtggcgagctacttaaaaatctcatacttgagaagaagatactgact
gttgccatacggtatctgaaagacgcatttccttttactgaaaagaaaacagatcttcgg
tcgtcacccgagtggacacgatctttggagcttccatcggttccgattatcctgtccatg
atgagaggattatctatcggtcactgcaagactcaagaatgtcttgacgaggaagaagtt
cttcctctgctccacgcactggagggcatgccaggagaaaacgagattggagcaagagca
gaaaatttgctggacacgctatccgataaagagacttgcggcgaaggattccttgccgag
acgatcctgaatttaagggagacaacacgggacgagatgagacgacgtgctttgcaacga
agggaagagttactacaggggctgggaatgcgccgagagctgagatctgatggaggtgag
cgcattgtcatatcaaagcctcgaattgaaggccttgaagacgtagaagaggaagaagcg
ggactggcatgcatggtttgtcgggaaggctacaaactgcggatgctgggagcttactcg
tacagcaagcgtgtaaacatcggttctgcgactgtccacggtcgtcccgagtggtgccac
caagaggaaaagcgagccgacgcctccctcaagaatcccaaaaaggagtgggaaggcgca
gctatacgcaacaacgagacgctgtgtaacgatctctttcctctccgcggcccagcagtc
gcgcttgcgcagtactctcggtgcgttgatactttctgggacaacttaaacgccctcgga
cgtgcggatggtagccggctgcgcttgctcacttacgatatcgtcctgatgctgggccgc
tttgcaacgggggcctcgttcagtgtcgatagtaaaggtggtggcaaggaaagtaactcg
aggctcttgcctttcatggtacaaatggccggacatctcttggaccagcagggaccgagc
caacgccgtgttctcgcaaaatccttacaaacgttcctccaggcatcgcctcccgagact
gacgccaccactactcctgtttcgagaaccatctccagccccggcacgccggccagatcg
gacgagacagtgcagtatatgatggtccagtcgctgctgctacaatcccacgacgagtgg
caacagcacaggaaaacggcttctcctctttctgcctcgacatcgccatccccagcggcc
aggaacccgatagagtttgctctgagcttcagcccggcagcggatatcaagagaacagcg
agctcgggaggactccaagctacgtcaactccatcgctcagcagcgagcagctgtttagc
atcctccagccgatgctggtgtttatcgggatcatcgatcagctccagagatttttcaag
agccggagtggtagtgccgtcgccaacaggagtagcagcgggagtagcagcagcgccggt
ggaactaccgacgatggaactgaggcgtgggaggccaccatgaaggagaagctccgggac
gtgagcgccatgctcgccttctccaaggatttgctcgagtggctggaggatatgcagagc
tcggcggatctgcaagaggctctggacgtgatgggggctctgggagatgctttctcggct
ggtttctcgtcctgcgacgagtttttcagggacgctctcggcctggcatcgctttga
DBGET
integrated database retrieval system
