Selaginella moellendorffii: SELMODRAFT_444750
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Entry
SELMODRAFT_444750 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smo03021
]
SELMODRAFT_444750
Transcription machinery [BR:
smo03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
SELMODRAFT_444750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
GatB_Yqey
Ras_bdg_2
Motif
Other DBs
NCBI-GeneID:
9646966
NCBI-ProteinID:
XP_002981027
JGI:
444750
UniProt:
D8SCK8
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MVWCSYCGKDQIAEHNDGFICCTGCGRVLDDNVFSSEPTFAKSASGQSQFVGNIVKQSQY
GTYARIVDDGTGTVSGYQSNSHQRTLDKGRQEIRNIASSLSVGGGDDIVGSAHRIYVLAV
EKNFTKGRRTSQVAAACLYIVCRQGNKPYLLIDFSDCLQTSVYLLGAVFLQLCTLLRLDQ
HPMVQKPVDPSLFIHRFTDRLLHRIAPGTSSKNQFAIANTALRIVASMKQDWIQTGRRPS
GICGAALLLSTRIHGLECSTADVESVVYVCKATITKRLVEFSNTEAGSLTPEEFEAKAKQ
REKEMLSVSQTDIVNNGVIKEILCEHKDSGAQHYAHGLCKNCYDDFVKISGGLQGGSAPP
AFQRAQKERERLLKNKKRKLTAEAISDEDEDLTCTNSSPVAEKAIKKKLEQEEHSYFDAD
DVTESCVTHETKAEKRYEDSVDDEPESLSDIDDVELTTYLNTEDEIRLKTIVWTEMNKEY
IQEQEAKEAALKAQAESMAAVSTSGTAAEIAAATVVMSRKARKHKHGDTANCKPAESAAE
ATRQMLEKKRLSSKLNYSVLEKMFNGKEDSPSKWVEEPPGKTEPADTKVPPEEEHDREGN
ENENEHENENEAELENDIPSYSYIYEQAVEEDYEEY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggtgtggtgtagctactgtggcaaggaccagattgccgagcacaacgatggattcata
tgctgtactgggtgtgggagagtactcgatgacaatgtcttctcctccgagccgaccttc
gcgaaatcggcgtctggacagagccaattcgttgggaacattgtgaagcaatcacagtat
ggaacttacgcccgcatcgtcgacgatggcaccgggaccgtctcgggctaccagtcgaat
tctcatcagagaacgctggacaaaggcaggcaggagattcgaaacatagcgagctcgctc
tcagttggcggtggcgatgatatcgttggttctgcgcataggatttatgtcttagccgtg
gagaaaaactttacgaaaggaaggaggacatctcaagttgccgcagcatgcctctacatt
gtttgcagacagggaaataaaccatatctgctgattgatttctcggactgcctacaaacc
agtgtatatttgctaggagcagtttttctccaactatgtaccctattgagattagatcag
catccaatggttcaaaagcctgtggatccaagtctgtttatccatcgtttcacggaccga
cttctacacagaatagcaccagggacttcctccaaaaatcaatttgccattgcaaatact
gcacttaggatagtagctagcatgaagcaagattggattcagacgggtaggagacccagc
gggatctgtggagctgctttacttttatcaactcgaattcatggtctggaatgctcgaca
gcggatgtggaaagcgtcgtttacgtttgcaaggctacgataaccaagcggcttgtagag
tttagcaacacagaagctggtagcctaactccagaagaatttgaagcgaaggctaaacaa
cgagagaaagagatgctgtccgtttctcagaccgatattgtaaataacggggttatcaag
gaaattctttgcgagcacaaggactcgggagctcaacactacgcgcatggactctgtaaa
aactgctatgacgatttcgtcaagatttctggtggattacaaggaggatctgcacccccg
gcctttcaaagggcccagaaagagcgcgagagactattgaagaacaaaaagagaaagctg
accgctgaggccatctcagacgaggacgaagatttgacatgcacaaacagctctccagtc
gctgaaaaagctatcaagaaaaagctggaacaagaggaacacagttactttgacgctgac
gatgtgaccgagagttgtgtcacacacgaaacgaaggccgaaaagcgatacgaagacagt
gtggacgacgaaccggagtcactttctgatatcgatgacgttgagctaactacttatctc
aacacagaagacgaaatcagactgaaaaccattgtctggacggagatgaacaaagaatac
atccaggagcaagaagccaaggaggcagcactcaaggcgcaagctgagtccatggctgcc
gtgtcgacgtcaggaactgctgcagagattgccgcagctacagtagtgatgtccagaaag
gctagaaaacacaagcatggtgatactgcaaactgcaagcccgcggaatcagcagccgag
gcaaccagacaaatgctagagaaaaagagactgagctccaagctcaactatagtgtgctg
gagaagatgtttaacggcaaggaggattcgccatcaaaatgggtcgaagagcctccggga
aagaccgagccagccgacaccaaagtcccaccggaagaagaacacgatcgggaaggaaac
gaaaacgaaaacgagcacgaaaacgagaacgaagccgagctggagaacgatatcccgagc
tatagctacatttacgaacaggccgtggaagaggactacgaagagtactag
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