Selaginella moellendorffii: SELMODRAFT_44478
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Entry
SELMODRAFT_44478 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_44478
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_44478
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
SELMODRAFT_44478
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
SELMODRAFT_44478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_Nup35
SET_assoc
Motif
Other DBs
NCBI-GeneID:
9649451
NCBI-ProteinID:
XP_002985112
JGI:
44478
UniProt:
D8RFQ2
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
QQLELQQWKQALMQQAAVLQQQQPFLHPGLITAMSQIEPIPSGNLPPGFDATSCRSVYVG
NIHIKVTEALLAEVFATVGPLEGCKLIKKEKSSYGFVDYFDHRSAAAAIITLNGKLIFGQ
SIKVNWAYASGQREDTTGHYNIFVGDLSPEVTDATLYAAFFMYPGCSDARVMWDQRSGRS
RGYGFVSFRSKQEAERAINEMNGKWLGSRPIRCNWATKSTGSQEDVPTPGPVSVPEQVAV
VQVQMKQEPNHDEQHEDGAMQLDGPENNPQFTTVYVGNLAHEVTQTELHRQFHALGVGVI
EDVRVQKEKGFGFVRYRTHEEAAYAIQAANGRVICGKSVKCSWGSKPTPAGASSNPLPPP
PPVALPLQSLMAAGMNQAYSAADLLAYQRLSQSSGTGQALLPLPQQGTSGSRVFDGIQPS
AAAAA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
caacagttagagttgcagcaatggaagcaagcgctaatgcagcaggcggcggtgctccag
cagcagcagccattccttcatcctggtctcatcacggccatgtcccagattgagccaatt
ccaagtggaaatctgccaccagggtttgatgcaacttcttgtcgcagtgtatacgttggt
aacattcacatcaaagtaacggaagcgttgcttgcggaggtttttgcaacagttgggcct
ctcgaaggttgcaagcttataaagaaagaaaaatcctcttatggttttgtcgattacttc
gatcacagatcagctgccgctgcgatcattaccctcaatggcaagctaatatttgggcag
tccataaaggtgaattgggcttatgccagtgggcagcgagaagatactacaggacattac
aatatttttgtgggtgatcttagtcctgaggtcacagatgcaacactctacgctgctttc
ttcatgtatcctggttgttcggacgctcgggttatgtgggatcaacgatctggccgctct
cgtggatatggttttgtgtcgttcaggagtaaacaggaagcagaaagggctatcaatgag
atgaatgggaagtggcttggcagtcgtcctattcgctgtaactgggcaacaaaaagcaca
ggatcgcaggaggacgtaccaacaccaggacctgttagcgtacctgagcaggttgctgtt
gttcaagtacaaatgaaacaagagcccaatcacgatgaacaacacgaggatggggccatg
caattagatggtcctgaaaacaatccacagtttacgacagtatacgttggtaatttagcg
cacgaggtgacacagacagagttacatagacaattccatgctttaggtgttggagtgatt
gaagacgtaagggtgcagaaagagaaaggcttcggttttgtacgctatagaacacacgaa
gaggcagcttacgctattcaggcagcaaacgggagagtgatctgcgggaagtccgtcaaa
tgctcatggggaagcaagcctacaccagctggagcatcgtcgaatcctttgcctccacca
ccaccagttgctctcccgttgcaaagcttgatggctgctgggatgaatcaagcatactcc
gcggcggacttgctggcgtaccaaaggctaagccaatccagtggaacgggacaggcgctg
ttaccacttcctcagcaaggaacaagcggttctcgagtttttgatggcatccagccgagt
gctgcagcggcagca
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