Selaginella moellendorffii: SELMODRAFT_445149
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Entry
SELMODRAFT_445149 CDS
T01496
Symbol
TIR1B-2
Name
(RefSeq) hypothetical protein
KO
K14485
transport inhibitor response 1
Organism
smo
Selaginella moellendorffii
Pathway
smo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
SELMODRAFT_445149 (TIR1B-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_445149 (TIR1B-2)
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
SELMODRAFT_445149 (TIR1B-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
9636207
NCBI-ProteinID:
XP_002982385
JGI:
445149
UniProt:
D8SG63
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MVYEFPDDILEHVLVFLSSHRDRNSVSLVCKSWYKAEAASRANLFIGNCYSVSPELVARR
FPKVRSLTLKGKPRFADFNLLPPHWGAYLLPWIVTFAHASLPLEELRLKRMCVSDEALDL
LATSFPSFRVIVLNNCDGFSTKGLASIARNCRNLQELNLQESLVEDHSGVDWISAFPDTT
TSLLALHFSCLDAAVDFDALDALVARNPQLRSLGLNKKVALWQLQKLLQRCGPQLTDLGT
GSMSGIGNLNGGGAVGVGGLPLPLPQQLQAQMQVQVQVQPQPAPEQQEMIQWERIQDLSA
CLASCTKLQSLSGIWEAEPPCLIALYPVCLNLLSLNLSYANLRNADLLQLLSHCHKLQRL
WLQDNVEDAGLRTVANTCKDLRELRVFPADHEGVGVVTEQGLLAISEGCANLSSILYFCR
RMTNSAITAMSRACSKMRRFRLCIITTRQPDHVTGEPLDEGFGAIVKNCKDLKRLAVSGL
LTDRAFQYIGEFGKNVETLSVAFAADSDVGLEAVFRGCTKIRKLEIRDCPFGDRALLAGL
ERYETMRFLWLSGCRVSIAGCDELSKKLPWLNVELVKESTEDEYTVDMLYVYRTVMASAR
SDRPPSVIGLRGGEYFWRWVRGAAVGTSNSSI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtgtacgagttcccggacgacatcctcgagcacgtcctcgtcttcctctcctcccac
cgcgatcgcaactcggtgtcgctcgtctgcaagtcgtggtacaaggccgaggccgccagc
cgcgccaacctcttcatcggcaactgctactcggtctcgccggagctcgtcgcgcgacgc
ttccccaaggtgcgctccctcacgctcaagggcaagccgcgcttcgcggatttcaatctc
ttgcccccgcattggggagcctatctcctgccatggatcgtcaccttcgcgcacgcgtcg
ctcccgctggaggagctccgcctcaagcggatgtgcgtgagcgacgaggcgctcgatctc
ctcgccacctccttcccaagcttccgcgtcatcgtgcttaacaattgcgacggcttcagc
accaagggcctcgcctccatcgccaggaactgccggaacttgcaggagctcaacctccag
gagagcctggtggaggatcacagcggcgtggactggatcagcgccttcccggacaccaca
acctcgctcctggcgctccacttctcctgcctggacgcggccgtggacttcgacgccctg
gacgcgctggtcgctcgcaacccgcagctccggagcctgggcctcaacaaaaaggtggcg
ctgtggcaattgcagaagctgctccagcgctgcgggccgcagctcacggatctgggcacg
ggctcgatgagcggcatcgggaaccttaacggcggcggagcagttggcgtaggtgggctt
ccgcttccgcttccgcagcagcttcaggcgcagatgcaggtgcaggtgcaggtgcagccg
cagccggctccggagcagcaggagatgattcagtgggagcggattcaggacctgagtgcg
tgtctcgcgagttgcaccaagctgcagagcttgtccgggatctgggaggcggagccgccg
tgtctcatcgcgctctacccggtttgcctcaacctcctctcgctcaacctcagctacgcc
aacctccgcaacgcggatctcctccagctgctcagccactgccacaagctccagaggttg
tggctccaggacaatgtcgaggacgccgggctgcgcaccgtggccaacacctgcaaggat
cttcgcgagctccgggtgttcccggcggatcacgagggcgtcggcgtggtgaccgagcaa
ggcctgctcgccatctccgagggctgcgccaacctctcctcgatcctctacttctgccgc
cggatgacgaactcggccatcaccgccatgtcgcgcgcctgctccaagatgcgccgcttc
cgcctgtgcatcatcaccacccggcagccggatcacgtcacgggcgagccgctggacgag
ggattcggcgccatcgtcaagaactgcaaggacctcaagcgcctcgcggtctcgggcctg
ctcaccgatcgcgccttccagtacatcggcgaattcggcaagaacgtggagacgctctcg
gtggcgttcgcggcggacagcgatgtgggcttggaggcggtgttccggggatgcaccaag
atccgcaagctggagatccgcgactgcccgtttggcgatcgcgcgctcctggcggggctg
gagcgctacgagacgatgcgcttcctctggctctcgggctgccgggtgagcatcgcgggc
tgcgacgagctgtccaagaagctgccgtggctcaacgtggagctcgtcaaggagagcacg
gaggacgaatatacggtggatatgctgtacgtctaccgtacggtgatggcgagcgcgagg
agcgaccgcccgcccagcgtcattgggctgcgcggcggggagtacttttggcggtgggtg
cgcggcgccgcggtgggcacgtccaattcgagcatctag
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