Selaginella moellendorffii: SELMODRAFT_445508
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Entry
SELMODRAFT_445508 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K13192
RNA-binding protein 26
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smo01009
]
SELMODRAFT_445508
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smo03019
]
SELMODRAFT_445508
03041 Spliceosome [BR:
smo03041
]
SELMODRAFT_445508
Protein phosphatases and associated proteins [BR:
smo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SELMODRAFT_445508
Messenger RNA biogenesis [BR:
smo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
SELMODRAFT_445508
Spliceosome [BR:
smo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
SELMODRAFT_445508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
zf_CCCH_4
RRM_PARP14_3
CCDC28
zf-CCCH
Tox-ODYAM1
Motif
Other DBs
NCBI-GeneID:
9654806
NCBI-ProteinID:
XP_002983396
JGI:
445508
UniProt:
D8SJ56
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MKFEDGPLKSYLVKNLQPLTAADPALLANYVAALLKNNKPKPELQTLCVDKLFDFLGDGT
KQFVTQLFKDIEDGTLVEVPEDSVSPAAPPAGDATTEVKSSPTPVTRTIPSAIQTNDDGD
ESSDDEDDDRNHKHRRRISRSRSFDKDAEENERSHHRKRSRSTENGHYRDNHRHYDHRRS
YRGRDGLASRIVVDGAVHGGGMRGGLPFRDAGGPRFFGPGLQRNMAGNGGRGWLPPDQRF
AGAFPPDFPPALLAQGPSTSNIFPGRVPGGRGGPPPQPPWGNFGLLENGSLEVIPLNPRG
SNPMAMISRTRCLDFEERGYCLRGDLCPMEHGANRIVVEDVQSLSKLTLPIGNARNGTSS
APPEKVARTNRESLGGEDGNPASTVSDSYDPDQPLWGGKDPSDKVRHYNSERQWDNGSDP
REVGVDDKTGDNTSKSLEPGVSVWDRIGPVDGEKGSVKRPKLSGAEEGNGHMANNGGVQA
EKHSHLQRTAAGTSYSGTDGRDDRTEKAQRTLYVRCIPTDTNKADILKGHFQKFGKVLDI
RIPTMWKDRAFVQFYERESALAALASPEAVLGNRFIQLDWANRDNRVHPHPYDYHRSKPG
APAAGKEVPNGTTATPGTPAPEAKMPATNGMALQAQKKQEELEQMKEEIRKKQEALAAKR
NEFKRKLDKLAKQGVTLPASESDAQATEDTNSSTLPAAAKSPKSPFPRPGQQFNSAAAAP
WGPSRYKLDNRTTVFRIISPPPSALSDIVALKAHFGTYGEVSDLEVVEEGSAAQVSFATR
RDAEKAFAQGKSWQGQPLQFAWVNNPTPSSTIAPPPSSSSNFSPSIAQQDATVGIEGTV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaggatgggccgctcaagagctatttggttaagaacctccagcccttgact
gctgcggacccggcgttgctcgcaaactatgtagctgcgctcctcaagaacaacaagccc
aagccagagcttcagaccctttgcgtggacaaactcttcgattttctgggcgatggcaca
aaacagttcgtaacacagctttttaaagacatagaagatggtactttggtagaggtccca
gaggactctgtctcgcccgctgctcctccggctggcgatgcaacgacggaagtgaagtct
tctcccacgcccgtgacccggacaataccatcagcaattcagactaacgacgatggagac
gagagctctgacgacgaggatgatgataggaatcataagcacagaagacgcatttctcga
tcgaggtccttcgacaaggatgccgaggaaaacgagagaagccaccacaggaaacggagc
agatcaacggagaatggtcactacagggacaaccatcgccactatgatcaccggaggtct
tatcgaggtagagacggcctggcttcgcgaatagttgttgatggagctgtccacggaggt
gggatgcgaggtggtcttccgtttagagatgctggtggcccgaggtttttcggtcctggt
ctgcagcggaatatggctggtaatggtggacgtggttggcttcctccggatcaaagattt
gccggggcttttcctcctgactttccacccgcacttctagctcaaggaccttccacttcg
aacatttttcccggaagagtccctggtggtagaggtggtcctccgccgcaacccccgtgg
ggaaactttggcctgctggagaacggatctttggaagtgatcccactcaatcctcgtgga
agcaatccaatggcgatgataagcaggaccaggtgcttggactttgaagagcgtggatat
tgtttgcgtggagacttatgtcccatggagcatggtgcaaaccgtatagtcgtggaggat
gtgcagagcctctcgaagctgactttaccgatcggaaacgcaaggaatggaacatcatcg
gctccaccagaaaaggtggctcgaacaaatcgagaaagccttggtggagaggatggcaat
ccggcaagcacggtgtcggattcctatgacccggaccagcctctttggggtggcaaggat
ccgtccgacaaagtgaggcactataactcggaacggcagtgggacaatggatcggatcca
cgggaagtcggggttgatgacaaaacaggtgacaacacttccaaaagtctagaaccaggt
gtttcggtatgggataggatcggccctgtagatggtgagaaaggtagcgtgaaaaggccg
aaactttcaggagcagaggaaggaaatggtcatatggcaaacaatgggggtgtacaggct
gagaagcactcacatttgcaacgaaccgcagctgggactagctacagtggaacagatggc
cgggacgatagaacggaaaaggctcagcgcacgctatacgtgcgttgtattccgactgac
actaataaagccgatattctcaagggacacttccagaagtttggcaaggtgctagatatt
cggattccgaccatgtggaaggacagggccttcgtgcagttttacgagcgggagagtgca
ctggcagctcttgcgtcaccggaagctgttcttggcaaccgattcattcaactcgactgg
gcaaaccgtgacaacagagtccacccgcatccttacgactatcatcgttcaaagccaggt
gctccggcggcggggaaagaagttccaaacgggacgacggctacgccagggactccagct
ccggaagcgaaaatgcctgctacgaatggcatggctttgcaggcgcaaaaaaagcaggag
gagctggaacagatgaaggaggagattcggaagaagcaggaggctctggccgcgaagagg
aacgagttcaagcggaagctagacaagcttgccaagcagggtgttacgcttcctgcgagt
gaatctgatgcacaggctacggaggatacgaactcgtctacccttccagccgctgcgaag
tctccaaaatctccttttcctcgtcctggacaacaatttaactctgctgcagcagcacca
tggggaccgtctcggtacaagcttgataatagaacgactgtattcaggatcataagtcct
ccaccttctgcactttcagacatagtggcactgaaagctcattttggaacttatggtgaa
gtttccgacttggaagtagtcgaggaaggcagcgctgcccaagtctcttttgccacacgc
cgggacgcggagaaggctttcgcgcaggggaagtcgtggcaaggacaacctctccagttc
gcgtgggtgaacaatcccacgccatcgtcaaccatagctccgccgccatcgagctcttca
aacttctcgccctccatcgcgcagcaagacgcgactgttggaatcgaaggcacagtctag
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