KEGG   Selaginella moellendorffii: SELMODRAFT_445541
Entry
SELMODRAFT_445541 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
smo  Selaginella moellendorffii
Pathway
smo03030  DNA replication
smo03410  Base excision repair
smo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SELMODRAFT_445541
   03410 Base excision repair
    SELMODRAFT_445541
   03420 Nucleotide excision repair
    SELMODRAFT_445541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smo03032]
    SELMODRAFT_445541
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_445541
Enzymes [BR:smo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SELMODRAFT_445541
DNA replication proteins [BR:smo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    SELMODRAFT_445541
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      SELMODRAFT_445541
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 9655106
NCBI-ProteinID: XP_002983454
JGI: 445541
UniProt: D8SJG5
LinkDB
Position
Unknown
AA seq 2410 aa
MGRGDGAPRALAGPECGMGRGDGAPRALAMAKGAAEEKFGFGLFTEGDPKLGWLLNMSPD
EECGNQTFSCVNLCFLCQDGSGFKTRVKFAPYFYIGAKIGMELELESYIRRRFEGLISNT
KIVEKEDLDLKNHLSGLRKRFIKISFNTVQDLMQVKSDLMPIVARNQAKLEAVEAYESVL
YGLSTEKQNKSKVYDYNECIVDIREFDVPYHVRFAIDNDVRCGEWYVVTVDAARTKLEKR
PDLLQRAEARVCAFDIEATKLPLKFPDASYDSVMMISYMVDSQGYLIINRECVSEDIDDI
EYTPKPEFEGHFKVRNAASEKELLEWWFDHMREIKPNIFVTYNGDFFDWPFIEERAKHHG
LSMRDKLGFSCDSAQGECLSKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEV
NPEDMVRFASEQPQKMAAYSVSDAVATYYLYMTYVNPFIFSLATIIPMSPDEVLRKGSGT
LCEMLLMVQAFKGNIICPNKHKSEPERFYSGRLLDSETYIGGHVECLESGVFRSDLPTRF
RLVPEAYQKLVDNLDRDLLYAIEKEGKMNAQEVTNYDELENLRDVPNREEQPVIYHLDVA
AMYPNIILTNRLQPPSIVTDETCAACDFNRAEKTCLRPMQWVWRGESFMTKRSEYYHLKN
QIESEMFTAGEGKPSQYFRDLSKDEQQSKLRDRLKKYCQKVYKRVLDKPTTEQRVAGVCM
RENSFYVDTVRSFRDRRYEYKTLNKDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSME
MAGIVTYTGAKIIQNARILVEQIGKPLELDTDGIWCALPASFPENFVFRTNSPIRDKKLP
ISYPCVMLNVDVALNNTNHQYQTLADATERTYRTSSECSIEFEVDGPYKAMILPASKEEG
VLIKKRYAVFNDDGTLAELKGFEVKRRGELKLIKVFQAEVFEKFLQGSTLEECYDAVAAV
ADRWLDMLENQGADVADSELLDYISESSTMSKSLADYGDKKSCATTTAKRLADFLGEAMV
KDKGLSCRYIVARDPQGSPVSERAVPVAIFETEAEVMRAYLRKWCKVSADADFRSIVDWS
YYRQRLASTIQKIITIPAAMQKVANPVPRVSHPDWLWKRVREKDDKYRQKSIFDAFKPIT
NADVDNEALVGDLEDICGGKETCSSKGLNAEVETAATANTEPLCTSDGDDYGAWLDKRKR
KWKDVREKRKRLRQGPEPRHTDNRLNRSKKGNSVNTFFQNREASLTRSHWEVLQFEATEK
PGNFIAWVVAGSSMYKVPVKVSRIFYLNTRAIVSEDYPGKRVSRVLPHGKACFNLIEVIL
DEEQYKQAKKDVVAHLSDPEVEGVYETRLPLVLQAILQLGCVCSVDVKAQKRSLNEGWSL
EELHMKTTTECSYLADNVSFIYLYHSAFEPRGCYALYAPLAAKVLVIIVNPSVNKEVSTN
WLERQFRDSLRTQESSVMEEFNMDTSDVNFEIEYLATYAEAGRRLQRTLHDYLDQFRRPA
VAIVECPSMENIVAHVPAILEVPRVQVPWNSRHSDYKLLGWQPVAAKLAMQRCAASPSWL
SERIALCRYAHVPLGNLDSDWILFTADAFYARVLKDNQHVLWISDDGLPDLGGVPQDEPS
FTDVVQQPSLCYPGAYRSVTIELKINHLAVNALLKSTQVNELEGGALLGFELDATGSNLR
QVGGSWDETNSCAPAFGLLKQMVLRPLTVLMLILTLCCSPLSKLHDPSLHRLLHKVMQKV
YALLLAELRKLGATIVYGSFSRIIIGTGKHNVEAAKNYCDHLLKTLQTREMFEWIELEPQ
RYWHSILFMDQYNYGAIQAKVSSEDNSEEFEIVSSWNIAEYLPKAIQEFFIVVVSEFIYL
PWKHAQETIAARSFSFSSTPSVTVAAAADADALETSFLKEQIESYFTDKLLRIVRDIQRH
FTASRDVDDFKFPNLAGSHLALGDAALEFIKYIYAAMSLDHRVQHSVQVMRKNLLRLVHV
REFAPEAQFHDPCLSFTLPNVICSYCNDCRDLDLCRDAALLQKDWHCTVPQCGQMYNVQW
IENALLQIVRQRERLYHLQDLKCVKCRQIKAAHITEQCSCGGSFECVEKSAEFMSKSHVF
LNIATYYGFDLLKEIRTRDPWFCEGFSSMEGVVQAETTAPSPAPAPAPVPFPKLQLRNPF
VFKIAQITTGAGVGCGVGIGVGRPIQLGALSRFGIPVQDLNRLLGKSGRYFNQFKAKLGI
KTLDAGIGCGVGIGHGFMLVGVGLKQGVTEQLLQFAQDSGAALASRFGPHLGPLAVVDSK
MLLPGSNLISPNPAGPSSPSSPPAARANVLASYIPAASTPPHAPIQMPGSTSSQTQTSEV
ERLRLEKEILQTLLRQQRQIEDLNEELKALREGKEVTPAPPRPQSTAPRLASSDHWDRCF
ECRRRARRRS
NT seq 7233 nt   +upstreamnt  +downstreamnt
atggggcgcggggacggggccccgagagctctcgcaggcccggaatgtggcatggggcgc
ggggacggggccccgagagctctcgcgatggcgaaaggggcagcagaggagaagtttggg
tttggattgttcacggaaggagatccaaagcttggatggcttctcaacatgtcgccggac
gaggaatgtggcaatcagactttcagctgtgtaaatctgtgctttctgtgccaggatggg
tcgggttttaaaacccgtgtgaagtttgctccatatttctacataggagcgaagattggt
atggaacttgaactagagtcgtatattcggaggcgttttgagggactcatctcaaacacg
aaaatagtcgaaaaggaagatcttgacctgaaaaatcacctttctggactgcgcaagcga
tttattaaaatcagcttcaacacagtccaagatctcatgcaagtaaaaagcgacctgatg
ccaatcgtggctcgcaatcaagcgaagctggaggcggtcgaagcttatgaatctgtactg
tacgggctaagcacagagaagcaaaacaaatcgaaagtttatgactacaatgaatgcatt
gtagatatacgcgagtttgatgttccgtatcatgtccgcttcgcaatagacaatgatgtc
agatgtggagaatggtacgtcgtaaccgtagacgcagcaaggacaaagttggaaaaacgg
cccgatctccttcagcgagctgaggctcgcgtatgtgcttttgatattgaagcaaccaaa
cttccgttgaagtttccagatgcatcttatgatagtgtgatgatgatatcgtatatggtc
gatagccagggctatctgattatcaacagagagtgtgtaagtgaagacatagacgacatt
gaatatactcctaagccagagtttgaaggacattttaaggttcgaaatgcagcctcggag
aaagaacttctagagtggtggttcgaccatatgcgtgaaattaaaccgaacatctttgtt
acctacaacggagacttctttgactggccttttattgaagagcgggccaaacatcatgga
ttaagcatgcgcgacaaactcggcttttcctgtgattcagcgcagggagagtgtttaagt
aaattcgcttgtcacttagattgcttcgcttgggttaaacgtgacagctaccttccacag
ggcagccaaggtcttaaggctgtgacgaaggcgaagcttggatatgatcctctggaagtc
aatccagaagacatggttcgtttcgctagcgaacaacctcagaaaatggcagcttattcc
gtctcagacgccgtcgcgacgtattatctttacatgacatacgttaatccgtttatcttc
tctcttgccactatcatacctatgtctccggacgaagtgttacgaaagggtagtggaact
ttgtgtgaaatgcttcttatggttcaggcatttaaaggaaacattatctgcccgaacaaa
cacaagtcagaaccggaacggttttacagtggtagacttctggatagcgagacatacatt
ggaggccatgtcgaatgccttgagagtggtgtttttcgttcggatcttcctactagattt
cgactcgtgcccgaggcataccaaaagctggtagacaacctggatcgcgaccttttgtat
gccatagagaaagaagggaagatgaatgctcaggaagtgaccaactatgacgagcttgaa
aatctacgggatgtacccaacagggaagagcagcctgtaatatatcacttggacgtggcg
gccatgtatcctaatattatactgactaatcgccttcagccgccttcaattgtaactgat
gaaacatgcgcggcctgcgattttaatcgagccgaaaaaacgtgtttgcgtcctatgcaa
tgggtttggagaggcgaatcctttatgaccaagagaagtgaatactatcatctgaaaaac
caaattgagtccgaaatgtttacagcaggagaagggaagccttcacagtattttcgtgat
ctgtcaaaagacgagcagcaatctaagctgcgggacagattgaagaagtactgtcaaaag
gtttataagcgagtacttgataaaccgacaacagaacagcgggtagcgggagtgtgcatg
cgcgaaaattccttttatgtggatacagttcggagttttcgagaccgaagatacgagtac
aaaacccttaataaggatatggtggttttatatgattcactgcaacttgcacacaagtgt
attcttaactcattttacggctacgtcatgagaaaaggagcccggtggtattctatggaa
atggcaggaattgtgacatatacaggagcaaaaatcatccaaaatgcacggatacttgtc
gaacaaatcggaaaaccgttggagctggatacagacgggatctggtgtgctttaccagca
tcttttcctgaaaactttgtttttcgtacaaattctcctatcagagataaaaaacttccg
atttcgtacccgtgtgtgatgcttaacgtggatgtcgcgttaaacaacaccaaccatcaa
taccagacactggcagacgctacggaacgtacttaccgaacaagtagcgaatgctcaatt
gaatttgaggttgatggaccgtataaggcaatgatactcccggcctctaaagaagaggga
gtgcttattaaaaagcgctatgcggtcttcaatgatgacggaacacttgccgagctaaaa
ggctttgaagtaaagcggcgaggtgaacttaaacttataaaggtttttcaggcagaagtt
ttcgagaaatttcttcaaggtagtacgctcgaagaatgttatgacgctgtagcggccgtt
gctgacaggtggctggatatgttagagaatcaaggagcagatgtggctgatagtgagctt
cttgactacatatcggaatcaagtacaatgagcaagtccctcgccgattatggcgataaa
aaatcctgtgctaccaccacggctaagcggctagctgattttcttggtgaagctatggtg
aaggataaggggttgagctgtcgttatattgttgcccgggatcctcagggctcacctgtt
agcgaacgtgcagtacccgttgctatatttgagactgaagctgaggttatgagagcatac
ttgagaaaatggtgcaaggtgtccgctgatgcagattttcgctctatagtcgattggtca
tactacagacaacggttagcgtccactatacaaaagattatcacaattcctgctgcgatg
cagaaggtagccaatcctgttcctagagttagtcatccagactggttgtggaagagagtt
cgtgaaaaggatgacaaatatcggcaaaaaagcatatttgatgcttttaagcccataaca
aacgcagatgttgacaatgaggctttggttggtgacttggaggatatatgtggtggcaag
gaaacttgctcttcgaaagggctcaatgctgaagttgaaactgctgcaacagcgaataca
gaacctctctgcacctctgatggagatgattatggagcatggctcgataaacgaaaaaga
aagtggaaagatgttcgtgagaaacgaaagcgtctcagacaaggtcctgaacctcgacac
acagacaacagattgaacaggtcaaaaaagggaaatagtgtaaatacattttttcagaat
cgagaggcttcattaacacggtcacattgggaggttttgcagtttgaggccactgaaaag
cctggaaatttcattgcttgggtagtggctggtagttccatgtacaaggtccccgtaaag
gtgtcacgaattttttacctgaatacgcgtgctatagtttccgaagattatcctggaaag
cgtgtcagccgagtgctacctcacgggaaagcctgttttaatcttattgaggtcattttg
gacgaagagcagtacaagcaggctaaaaaggatgttgtagctcatctgtcggatccagaa
gttgagggagtttacgagactagattgcctctcgtacttcaagccattcttcaactcggc
tgtgtttgctctgttgacgttaaagcgcaaaagcggagcttaaacgaagggtggtcgcta
gaagaattgcacatgaagaccactactgagtgctcttatctggcagataacgtctccttt
atctacttatatcacagcgcatttgagccccgtggctgttatgccttgtatgctcctttg
gccgcaaaagttctcgttatcattgtcaatccgtcagtcaacaaggaggtgtcaacaaac
tggttagaaaggcagtttcgcgactcacttcggacacaagagtcatcggtcatggaagaa
ttcaacatggatacatcagacgttaacttcgagatagaatatttggctacatatgctgaa
gctggaaggcgtttgcaaaggactttgcatgattatttggaccagtttcggaggcctgcc
gtggcgattgtagaatgtccgtccatggaaaacattgtggctcatgttccggctattttg
gaggttcctcgagttcaagttccttggaattcacgtcacagtgactataagcttcttgga
tggcaaccagtagctgcaaaattagcaatgcagcgttgtgctgcctcaccatcctggctt
tcggaaagaattgcactttgtcgatacgctcatgttccgctgggcaatttggactcagac
tggattcttttcactgcggatgcattttacgcacgagtgctgaaggacaatcagcatgtt
ttgtggatatctgatgatggcttaccggatcttggaggtgttccacaagacgaaccaagc
tttacagatgtggttcagcaaccgtctttgtgctatcctggtgcttacagaagtgttact
attgagctcaagataaatcatctggcagtcaatgctcttttaaagagcactcaagtaaat
gagctggaaggaggagcgttgctaggctttgagcttgatgcaactggttccaatcttcgt
caagtgggaggttcctgggatgaaaccaattcttgtgcgcctgctttcggtcttctaaaa
cagatggtgcttcggccgttgacagttcttatgcttattctaactttatgctgcagtcca
ctgtcgaagcttcatgatccatcattgcaccggcttttacataaggtcatgcagaaggtg
tatgcacttttgctggctgaacttcgaaagcttggagctaccattgtgtatgggagtttt
tcgcgaatcataatcgggacaggaaaacacaacgttgaggctgccaaaaactactgtgat
caccttttaaaaacactgcaaaccagagaaatgttcgagtggattgagcttgagcctcaa
cgttattggcattccattttattcatggaccagtacaactatggcgctatccaagccaaa
gtttcatctgaagacaattctgaggaatttgaaattgtttcatcctggaatatagccgag
tatttgccgaaggctattcaggagtttttcatcgtcgtggtgtcggagtttatctatctc
ccatggaaacacgcgcaagaaactatcgcagcgagatcattttccttctcatcaacccca
tctgtgactgttgccgccgctgctgacgctgacgccctggaaacatcatttttgaaagaa
cagattgagtcatattttacagacaagctgttgagaatcgtaagagatattcaacggcac
ttcacggcttccagagacgtggacgacttcaagttcccgaatctagctggctctcattta
gctctgggtgacgcagctctcgagttcatcaagtatatttatgctgcaatgtcccttgat
caccgcgtgcagcattctgttcaggttatgagaaagaacttgcttaggctggttcatgtg
agggagtttgcacccgaggctcaattccacgacccttgtctatcgtttacccttccgaac
gtcatttgcagctactgcaatgactgccgagacctcgacttgtgtcgggatgctgccttg
cttcaaaaggactggcactgtacagttcctcaatgtggacaaatgtacaacgtccaatgg
attgagaatgcattactccagatcgttcggcagagagagcgtctttaccatctgcaggac
ctcaagtgcgtgaagtgccgccagataaaagccgcacatatcaccgagcaatgctcctgc
ggtggcagcttcgagtgcgtagaaaagtcggccgagttcatgtccaaaagccacgtattc
ttgaacattgcgacttactatggattcgacttgctgaaggagattcgaaccagggatccc
tggttttgcgagggctttagctccatggaaggcgtcgtccaggcggagacgacggcaccc
agcccagctccagccccggctccagtaccatttcccaagctccagcttcgcaaccccttc
gttttcaaaatcgcccagatcactacaggcgctggcgtgggatgtggcgtcgggattggc
gttggcaggccgattcaactaggggcgctctccagatttgggataccagtccaggacttg
aaccggcttctcggtaaatctggacgttacttcaatcagttcaaagcgaagctgggaatc
aagactctcgacgctggtatcggctgtggggttggaatcgggcatggtttcatgttggtc
ggtgtgggcttgaaacaaggagtgacggaacaattgctgcaatttgctcaggatagcggg
gcggcactcgctagtcgcttcggtccacacttgggaccactggctgtcgtggatagcaag
atgttacttcctggatccaacttgataagtccaaatcccgcaggaccttcgtctcccagt
tctccacccgcagctcgagcgaacgttttagcgagctacataccggccgcgtcaacgcct
ccccatgctccaatccaaatgccaggctcgacttcgtcgcaaacacaaaccagcgaggtc
gagaggttgagactggagaaagagatccttcaaactcttttgcgacagcaaagacagatc
gaggacttgaacgaggagttgaaagcattgcgagaagggaaagaagtgacacctgcacca
ccacggccacagtccactgccccgagattggcaagcagcgaccactgggatcggtgcttc
gagtgccggagaagagctcgaagaagatcatag

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