Selaginella moellendorffii: SELMODRAFT_446559
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Entry
SELMODRAFT_446559 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_446559
Enzymes [BR:
smo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
SELMODRAFT_446559
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
SELMODRAFT_446559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-GeneID:
9648692
NCBI-ProteinID:
XP_002986199
JGI:
446559
UniProt:
D8SSE5
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAISDSPQRADLWLINTCTVKAPTMGTLIRKGKAASIPLVDSWMRSSGFKRSRSCQRHRS
AVNTAGETLKGHEARLLRRDALPSLDLPKVRKNKFVEIIPINVGCLGACTYCKTKHARGH
LGSYTVDTPVQRLKTVVSEGRDIGANIPALLRALVAVLPHRQKYNAPNLHLTASGGNGCH
PCVYSFLHVLVQSGRDSVLEGMKREYTFSEFRKIVDTLTRLVPEIHIATDIICGFPGETS
EDFDRIMELIRECTFPQVHISQFYPRPGTPAALMKRVPTLEVKKRSRSLTSLFESFTPYA
GMEKTYRVWVTNTAADGIHLVGLCTSSTSSCTGPSWKQMVCDWRVANQIPLLETMLRKSD
ASSGSEAAGSVVTLVAFFTHSRRKQAQGRVCATLAQTRLGAIGSSNQSPISAIPDETVCG
RNSSAQVKPTYQDGWCISTARYCRLEALAFYISQTDTHFLSASLLPKLHSRLNLYDLEGR
YISWVKVCLHCSDLNYAVRRFNSSNAQPLSCQKFLSPSTWFLAMERKLLQQQQQPPMQAA
PATATARGLPTPAAAAAAAPAGQPAVPRPASSDRHSEHLGQHSPPKAPALWLVVAQPVST
ASRPAAAQQHHPEAATTKGSPKMLRGLLPAVESTRTTQTSPQSCYDPPESAVGDTIATAI
ANARLCFSSILSTVRSPDPTVHVVQA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccatctcggactctcctcagagagctgatctttggctgatcaacacgtgtactgtg
aaagctccgacaatgggaacactgatacgtaaaggcaaagcagcctctattcccttggtg
gatagctggatgcgttcctcagggtttaaaagatctcgaagctgtcagcgtcatcggagt
gcagtaaatacagcgggggagactttgaaaggccacgaggcccggctgcttcgacgggat
gctttaccgtctcttgatttgccaaaagttcgtaagaacaagtttgtcgagatcattcct
atcaacgttggctgcttgggtgcttgcacatactgcaagacgaagcatgctcgcgggcat
cttggcagctacacagtagacacaccagtgcaaagattgaaaaccgtggtgtctgaagga
cgagacattggagcaaatataccagcgcttctacgtgctttagttgccgtgcttcctcat
agacagaagtacaatgctccgaatctacatcttacagcatctggaggaaatggctgtcac
ccctgcgtgtattcgttccttcatgttctggttcaatctggaagggactcggtgttggag
ggcatgaagagggagtacacgttttccgagtttagaaaaattgtggatactctcacaaga
ctagtcccagagattcatatcgctacagatattatctgtggatttccaggggaaacatca
gaggattttgacaggatcatggaactaatacgagagtgcacgttcccacaggtccacata
tcacagttttaccctcgaccaggaacaccggcggctctaatgaaacgggttccaacgctc
gaagtgaagaaacgaagccgttccttgacaagtctgttcgaatcgttcactccttacgca
ggaatggagaaaacgtaccgagtctgggtcaccaacactgctgctgatggaattcatctg
gttggcctgtgtacaagttctacttccagctgtaccgggccttcttggaagcaaatggtc
tgtgactggcgagtggcgaaccagattccactcctggagacgatgctgagaaagtcggat
gcgagcagcggatcagaagcggcaggctctgtggtcactcttgtggctttctttacacac
tccagaagaaaacaagctcaaggacgagtctgtgcaacgctcgcacaaactcgactgggc
gcaattgggagctccaaccagagtccaatctccgctatcccagatgagactgtctgtggg
agaaattcgtcggctcaggtcaagccaacttaccaagatggctggtgcataagcacagca
cgctactgtcgtctcgaagcactcgcgttttatatttcacaaacagatacacatttccta
tctgcctcacttctgccaaagcttcacagcagattgaatctgtacgacctggaaggtcgt
tatatctcatgggtgaaagtttgcctgcactgctcggaccttaattatgcagtccgacga
tttaacagctcaaacgctcagcctttgagttgccagaaatttctaagtcctagcacttgg
tttttggcaatggagaggaagctgctccagcagcagcagcagccgccgatgcaggcagcg
ccagccactgcaacagcccgcggcctgccaacaccagcagctgctgcggctgctgctcca
gccggccagccagccgtgccacggccggcctccagcgaccgccacagcgagcacttgggc
cagcactcgccgcccaaagcgccagccctgtggctcgtcgtggcccagcccgttagcact
gcgtcccggccagccgctgcccagcagcaccaccccgaggcagcaaccaccaagggatct
ccaaaaatgctaaggggattgctccctgctgttgagagcacccgcaccacccagacatca
ccacaaagctgctatgatccaccagaatctgccgtgggagacacaattgcaaccgcaatt
gcaaatgcccgcctctgcttctccagcatcctctccaccgtcagatctcccgatccaacg
gtccacgtggtccaagcctga
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