Selaginella moellendorffii: SELMODRAFT_447445
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Entry
SELMODRAFT_447445 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SELMODRAFT_447445
Enzymes [BR:
smo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SELMODRAFT_447445
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
9660828
NCBI-ProteinID:
XP_002988706
JGI:
447445
UniProt:
D8SZH7
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MKTLVCRLEERIRAWILRPWMRSLALAHDRRREVKASSLSRPRAGGIQNGLHHFRVLGNC
YPFGRKKKRMSCNRVPGGGCQGPDVRLIDRGSHVILDNGIVEVTISRPGGIVTGIRFGGI
DNLLEIHNKETNRGYWDLNWNEPGGKDTFDVDGDKVELSFLRPYIPGTKMLPLNIDKRFV
LLRGNTGFYTYGIYERPAGWPDFNLNQTRVTFKLRKDRFQFMAMADTKQRPMPSPDDRLQ
QHCTQLAYPEAVLIHTSQNPEFRGEVDDKYQYSCDNRENRVHGWISCNPALGFWIITASD
EFRNGGPLKQNLTSHVGPTCLAMFHSAHYAGAALCPEFRNGEAWTKVFGPVFIYLNVAAT
YAQVNCRYLWEDAKQQMVTEVGSWPVPWPVSPDFPKSMDRGSISGRLLVKDSFKSPTPFA
GCYAFLGLASPGDKGSWQTESKGYQFWAQADAEGYFHVKHVRAGKYNLYGWVPGVLGDYK
KEGSIDVYPGSWLQLGHMVYEPPRDGPTVWEIGIPDRTAAEFHIPDPNPKYINRLFVNHS
ERYRHYGLWERYSELYPEGDLVFTIGKSDWRSDWFFAHTCRIEKDGSVKPSTWQIRFHLP
CVQGGVYKLRLAFAASNNAAIQVRVNDPNTRTTVFDTMQFGKDNAIARHGIHGLYHLWNV
DVRSELFRAGENILYLTQRKPTSPHCGGYV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgctcgtttgccggctcgaggagaggatccgagcgtggatcttgcggccctgg
atgagatccctggccctggcacacgatcggagaagagaagtgaaggcatcctcgttgagc
cgaccaagggcagggggcattcaaaatggtcttcaccattttagggttcttggaaattgt
tacccgtttgggagaaagaagaaaagaatgagctgcaatcgcgttcccgggggcggatgc
caggggcccgatgtgcggcttatcgatcgcggcagccatgtgattctggacaacgggatt
gtcgaggtgacgatctcgaggcctgggggcattgtgacggggattcgcttcggcggcatt
gataatctgctcgagattcacaacaaggagacgaatcgcggctactgggacctcaactgg
aacgagcctggagggaaggacactttcgatgtcgatggtgacaaggtggaactttcgttt
ctgcggccttacattccgggaactaagatgcttcctcttaacatcgacaaaagatttgtt
cttctccgtggcaacactggattttacacttacggaatctacgagaggccggctggatgg
ccagacttcaaccttaatcaaacacgggtgacttttaaactccgcaaggacaggttccag
ttcatggcaatggccgatacaaaacagcggccaatgccatcgccggatgatcgtttgcag
caacactgcacgcagctagcttatcctgaggctgttttgattcacacttctcaaaaccct
gagtttcgaggtgaggtggatgacaaatatcaatattcttgtgataacagggagaacaga
gtacatggttggatctcatgcaaccccgctctaggcttctggataatcaccgccagtgac
gagttccgcaatggagggcctttgaaacaaaatttgacttcacacgttggcccaacatgt
ctcgctatgtttcacagtgcacattacgctggcgcagccctgtgcccagagtttcgcaat
ggggaagcctggactaaagtttttggaccggttttcatatatttgaatgtagcggcaact
tatgctcaggtgaattgtcgctatctttgggaggatgcaaagcagcagatggttacagaa
gtggggtcgtggcctgttccctggcctgtgtctccagattttcccaaatcaatggaccgc
ggaagcatttcaggaagactactagtcaaagatagcttcaagtcaccaaccccatttgcg
ggatgttatgcctttcttggcttagcttcccccggtgacaaaggttcgtggcaaacggag
agcaagggctaccaattttgggcccaggctgatgcggagggatatttccacgtcaagcat
gtcagagcaggcaaatataatctgtatggctgggtgcctggtgtcctgggtgactacaaa
aaggaaggcagcatagatgtctatcccgggtcatggttgcaactgggacatatggtttat
gaaccgcccagggatggaccgacagtctgggagattggaattcccgatcgaacagctgcc
gagtttcacattccggatccgaacccaaagtatatcaataggctttttgtcaaccattcg
gaaagatatcgacattatggcctgtgggagcggtactcggagctatacccagaaggtgat
cttgtgttcaccattggtaaaagcgattggagatctgattggttctttgcacatacttgc
cgaattgaaaaggatggtagcgtcaaaccatcgacttggcagatccggtttcatctgccc
tgcgtccaaggcggggtttataagctccggttagctttcgcggcatcaaacaatgcagcc
attcaggtcagagttaatgaccccaatacaaggaccacggtatttgacacgatgcaattt
ggcaaggataatgcaatagcacgccatggaatccatggcctctaccacctttggaatgtg
gacgtgaggtcggagttattcagagccggtgaaaacattctctacttgacgcagcgcaag
ccaacaagtccccattgtgggggttatgtatga
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