Selaginella moellendorffii: SELMODRAFT_447957
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Entry
SELMODRAFT_447957 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_447957
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smo04147
]
SELMODRAFT_447957
Membrane trafficking [BR:
smo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
SELMODRAFT_447957
Exosome [BR:
smo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SELMODRAFT_447957
Exosomal proteins of bladder cancer cells
SELMODRAFT_447957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF12
TPR_14
Beta-prop_Nup120_160
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
9630782
NCBI-ProteinID:
XP_002990232
JGI:
447957
UniProt:
D8T3R4
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
MLTTFETKSNRVKGLSFHPKRPWILASLHTGVIHLWDYRMGSLIDRFDEHDGPVRGVHFH
SSQPLFVSGGDDYKIKVWNYKARRCLFTLLGHLDYIRTVQFHQEYPWIVSASDDQTIRIW
NWQSRTCVSVLTGHNHYVMCASFHVKDDLVVSASLDQTVRVWDISSLRKKTVSPAEDLLM
LTQMNSDLFGGGDVVVKYVLEGHDRGVNWAAFHPSLPLIVSGADDRQVKLWRINDTKAWE
VDTLRGHTNNVSCVLFHARQDIIVSNSEDKTIRVWDLSKRSAVQTFRRDHDRFWVICGHP
EMNLLAAGHDSGIIVFKLERERPAYTISAGVLYYVKEKSLRTYDFATSEDTSLINIRRAG
LNQAPRTLSYNPAENAVLLCSDVDNGTYELYIIPRDSIRNDTLEPKKGSGSSAVFVARNR
FAVLDKAHGLILVKNLRNEVSKRVEAPSATVDAIFYAGTGTLLCRSDDKMILFDLQQKAV
LGEIHSPQVKYVVWSLDMEAVALVSKHSVVMTTKTLALKCSVHETIRIKSAAWDDKGVLF
YTTLNHIKYCLPNGDNGTISTLDVPIYITRVAGDKVYFLDREGKVKTITIDTTEFTFKLA
LLQERYDRVLEMIRSSRLCGQAIISYLQQKGFPEVALHFVKDERTKFNLAIECGNIEVAV
ASAKEIDEKDYWYRLGVEALRQGNHEIVEYAYQRTRNFERLSFLYLITGNLDKLSRMLKI
AETRNDVMGCFHNALYLGDVEERVKLLEKTGHVPLAYATAAVHGLVEVAERLATELGDKV
PQIPKLEKSKLLVPPSPILRDSNWPLLLISRGFFEGGFAEPGVVDQEEENAPDEWGEELV
IIPGGESQRTGEMEEIEEIQRAGAGAEEGEEEGGWELEDLELPPEVVQSQNATTSSFFAG
VTPGAPVTQLWTQRSSLAADHVAAGAFDSAMRLLNRQLGIKNFAPLQLVFCDLHLASQSS
LGAFKPVESLTYGLERGWSDSPPPNVRNGPALIYKLSQLEDRAKQAYKLTTEGKFTEALR
LFLAILHTVPVIVVDSRKEVDDVKDLIGKSKEYVLALKMELKRKDLRDEPVRQAELAAYF
PHCDIQPSHVRLGLQSAMAASYRCGNFATAAQLARRLLDMNPNQASIAKARQLLQACERN
PRDEKRMNYDGRNPFVVCGATFTPIYAGSRSVSCPYCAARFVPEVAGRICSVCDLAVVDA
DASGLVCCPTQSR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgacgttcgagacgaagagcaatcgcgtcaagggcctgagcttccatcccaag
cggccatggatcttggccagtctccacaccggcgtcattcatctgtgggattaccggatg
ggatctctcatagatcgcttcgacgagcacgacggcccggttcgcggcgttcatttccac
agctctcagcctcttttcgtctcgggaggcgatgactacaagatcaaggtctggaactac
aaggcgagaaggtgcctgttcacgctgctggggcatttggattacatccggactgttcag
ttccatcaggagtatccctggatcgtgagtgccagcgacgatcaaaccatcaggatttgg
aactggcagtcgcggacgtgcgtttccgtgctcacgggacacaatcactacgtcatgtgt
gcttcgtttcacgtcaaggacgatctcgtggtgtcggcatcgctggatcagactgttcgt
gtgtgggatatcagctctctcaggaagaagacggtctctccagccgaggatcttctgatg
ctcacgcagatgaacagcgatctttttggcggcggtgatgtggtggtcaagtatgttctc
gagggacatgacaggggtgtcaactgggctgcttttcatccgagcttgccgctcattgtc
tctggcgctgacgatcgacaagttaagctgtggaggataaatgacacaaaggcttgggag
gttgatactttgcgcggtcacaccaacaacgtttcctgtgtcctgttccacgctcgccag
gacatcatcgtctctaactcggaggacaaaactattcgagtctgggacttgtccaagcgt
tcggccgtgcaaactttcaggagggaccacgaccgtttctgggttatctgtggccacccc
gagatgaaccttcttgcggcagggcatgacagtggaattatagtcttcaagctcgaaagg
gagaggccggcttatacaatcagtgcaggggtgctgtattacgtcaaagaaaagagtttg
aggacttacgactttgccacttcggaggacacatcactgataaacattcgaagagcgggg
ctgaatcaggcgcctagaacgttgtcttacaatccagctgagaacgccgttcttttatgc
tcggacgttgacaacggtacgtacgagctttacatcatcccaagggacagcatcagaaac
gacactttggaaccgaagaaaggcagcgggtcgtcggccgttttcgtggcccgcaaccgc
tttgctgttctggacaaggcgcacggcttgattctagtcaagaatctcaggaacgaggtc
tccaagagagtcgaggctccatctgcgacagttgatgccatcttctatgcggggacggga
actcttctctgtcgctcagacgacaagatgatcttgtttgacctccaacagaaggcggtt
ttgggagagattcacagcccccaagtgaagtacgtggtttggtcactggacatggaggcc
gtggctctggtgagcaagcatagcgtcgtcatgacgacgaagacgctggctctcaagtgc
agcgttcacgagactatccgtatcaagagtgctgcatgggatgacaaaggggtgctcttc
tacacgactctgaaccacatcaagtactgtcttccaaatggagataacggcaccatctcg
actctggacgttccaatctacataactcgggtggccggcgacaaagtctatttcctggac
agggaggggaaagttaagaccatcaccattgacacgacggagttcacgtttaagctggcg
ctgctccaggaacgatacgatcgagttttggaaatgatcaggagctctcgactttgtgga
caggcgatcatctcatatctgcagcagaagggattccccgaggtagccctgcatttcgtg
aaggacgagaggaccaagttcaatctggccatcgagtgtggcaacatcgaagtcgcagtt
gcttcagcaaaagagattgacgagaaggattactggtacaggctgggggtggaagcttta
aggcagggcaaccacgagattgtggagtacgcatatcagcgaacaaggaactttgagagg
ctgtcgttcctctacctgataaccgggaatttggacaagctgtcgaggatgctgaagatc
gcagagacgagaaacgacgtgatgggatgctttcacaacgccttatacctgggtgacgtc
gaagagcgggtcaagttacttgagaaaacgggacacgttcctcttgcatacgcaactgcg
gctgttcatgggcttgttgaggtggcggagcgtctggctacagagctgggtgacaaggtg
ccacagattcctaagcttgagaagtcgaagttgctagtgccgccatctccaattctccgg
gacagcaactggccgctgctcttgatcagcagaggctttttcgaaggcggctttgccgag
cctggggtagtggaccaagaggaagaaaacgctccggatgaatggggtgaagaactcgtc
atcataccaggcggagagtctcaaagaactggcgaaatggaagagatcgaggagattcaa
agagccggagctggagctgaggagggcgaagaagagggaggctgggagctggaagacctg
gaacttccgccggaggtggtgcagagccaaaacgctacaacgtccagcttcttcgctggt
gtaactccaggagctccggtcactcaactctggacgcaaaggtcctccttggctgccgat
cacgtggccgctggagccttcgacagtgcaatgcgcctcctcaatcggcaactcgggatc
aaaaacttcgcgccgctgcaactggtgttttgcgacctccacctcgcgagccagagctcg
cttggggccttcaagccggtggagtccctgacgtatggcctcgagagaggctggtcggac
tcgccgcctccaaacgtccgcaacgggccagcgctgatctacaagctctcccagctggag
gaccgagccaagcaggcctacaagctcaccaccgaaggcaaattcactgaagctctccgc
ctcttcctcgccatccttcacaccgtcccggtgattgtcgtggacagccgcaaagaggtg
gacgacgtcaaggacctgatcggcaagagcaaggagtacgtcctggcgctcaagatggag
ctcaagcgcaaggatctcagggacgagcccgtccgccaggccgagctcgcggcgtacttc
cctcactgcgacatccagccttcgcacgtccggctcggcttacagtcggctatggcggcc
tcgtatcggtgcgggaacttcgccacggcggcgcagctcgcgaggcgattgctcgacatg
aatccaaaccaggccagcatcgccaaggcgcggcagctcctccaggcgtgcgagaggaac
ccccgcgacgagaagaggatgaactacgacggcaggaacccgttcgtggtgtgtggagca
acgtttacgcccatctacgcgggcagcaggtcggtgtcgtgcccctactgcgctgctcgg
ttcgtccccgaggtggcgggcaggatttgcagcgtttgcgacttggcggtggtggatgct
gacgcttccgggcttgtgtgttgcccgactcaatcgcggtga
DBGET
integrated database retrieval system