KEGG   Selaginella moellendorffii: SELMODRAFT_447957
Entry
SELMODRAFT_447957 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K05236  coatomer subunit alpha
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smo04131]
    SELMODRAFT_447957
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smo04147]
    SELMODRAFT_447957
Membrane trafficking [BR:smo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    SELMODRAFT_447957
Exosome [BR:smo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   SELMODRAFT_447957
  Exosomal proteins of bladder cancer cells
   SELMODRAFT_447957
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 TPR_14 Beta-prop_Nup120_160 Fis1_TPR_C
Other DBs
NCBI-GeneID: 9630782
NCBI-ProteinID: XP_002990232
JGI: 447957
UniProt: D8T3R4
LinkDB
Position
Unknown
AA seq 1213 aa
MLTTFETKSNRVKGLSFHPKRPWILASLHTGVIHLWDYRMGSLIDRFDEHDGPVRGVHFH
SSQPLFVSGGDDYKIKVWNYKARRCLFTLLGHLDYIRTVQFHQEYPWIVSASDDQTIRIW
NWQSRTCVSVLTGHNHYVMCASFHVKDDLVVSASLDQTVRVWDISSLRKKTVSPAEDLLM
LTQMNSDLFGGGDVVVKYVLEGHDRGVNWAAFHPSLPLIVSGADDRQVKLWRINDTKAWE
VDTLRGHTNNVSCVLFHARQDIIVSNSEDKTIRVWDLSKRSAVQTFRRDHDRFWVICGHP
EMNLLAAGHDSGIIVFKLERERPAYTISAGVLYYVKEKSLRTYDFATSEDTSLINIRRAG
LNQAPRTLSYNPAENAVLLCSDVDNGTYELYIIPRDSIRNDTLEPKKGSGSSAVFVARNR
FAVLDKAHGLILVKNLRNEVSKRVEAPSATVDAIFYAGTGTLLCRSDDKMILFDLQQKAV
LGEIHSPQVKYVVWSLDMEAVALVSKHSVVMTTKTLALKCSVHETIRIKSAAWDDKGVLF
YTTLNHIKYCLPNGDNGTISTLDVPIYITRVAGDKVYFLDREGKVKTITIDTTEFTFKLA
LLQERYDRVLEMIRSSRLCGQAIISYLQQKGFPEVALHFVKDERTKFNLAIECGNIEVAV
ASAKEIDEKDYWYRLGVEALRQGNHEIVEYAYQRTRNFERLSFLYLITGNLDKLSRMLKI
AETRNDVMGCFHNALYLGDVEERVKLLEKTGHVPLAYATAAVHGLVEVAERLATELGDKV
PQIPKLEKSKLLVPPSPILRDSNWPLLLISRGFFEGGFAEPGVVDQEEENAPDEWGEELV
IIPGGESQRTGEMEEIEEIQRAGAGAEEGEEEGGWELEDLELPPEVVQSQNATTSSFFAG
VTPGAPVTQLWTQRSSLAADHVAAGAFDSAMRLLNRQLGIKNFAPLQLVFCDLHLASQSS
LGAFKPVESLTYGLERGWSDSPPPNVRNGPALIYKLSQLEDRAKQAYKLTTEGKFTEALR
LFLAILHTVPVIVVDSRKEVDDVKDLIGKSKEYVLALKMELKRKDLRDEPVRQAELAAYF
PHCDIQPSHVRLGLQSAMAASYRCGNFATAAQLARRLLDMNPNQASIAKARQLLQACERN
PRDEKRMNYDGRNPFVVCGATFTPIYAGSRSVSCPYCAARFVPEVAGRICSVCDLAVVDA
DASGLVCCPTQSR
NT seq 3642 nt   +upstreamnt  +downstreamnt
atgctgacgacgttcgagacgaagagcaatcgcgtcaagggcctgagcttccatcccaag
cggccatggatcttggccagtctccacaccggcgtcattcatctgtgggattaccggatg
ggatctctcatagatcgcttcgacgagcacgacggcccggttcgcggcgttcatttccac
agctctcagcctcttttcgtctcgggaggcgatgactacaagatcaaggtctggaactac
aaggcgagaaggtgcctgttcacgctgctggggcatttggattacatccggactgttcag
ttccatcaggagtatccctggatcgtgagtgccagcgacgatcaaaccatcaggatttgg
aactggcagtcgcggacgtgcgtttccgtgctcacgggacacaatcactacgtcatgtgt
gcttcgtttcacgtcaaggacgatctcgtggtgtcggcatcgctggatcagactgttcgt
gtgtgggatatcagctctctcaggaagaagacggtctctccagccgaggatcttctgatg
ctcacgcagatgaacagcgatctttttggcggcggtgatgtggtggtcaagtatgttctc
gagggacatgacaggggtgtcaactgggctgcttttcatccgagcttgccgctcattgtc
tctggcgctgacgatcgacaagttaagctgtggaggataaatgacacaaaggcttgggag
gttgatactttgcgcggtcacaccaacaacgtttcctgtgtcctgttccacgctcgccag
gacatcatcgtctctaactcggaggacaaaactattcgagtctgggacttgtccaagcgt
tcggccgtgcaaactttcaggagggaccacgaccgtttctgggttatctgtggccacccc
gagatgaaccttcttgcggcagggcatgacagtggaattatagtcttcaagctcgaaagg
gagaggccggcttatacaatcagtgcaggggtgctgtattacgtcaaagaaaagagtttg
aggacttacgactttgccacttcggaggacacatcactgataaacattcgaagagcgggg
ctgaatcaggcgcctagaacgttgtcttacaatccagctgagaacgccgttcttttatgc
tcggacgttgacaacggtacgtacgagctttacatcatcccaagggacagcatcagaaac
gacactttggaaccgaagaaaggcagcgggtcgtcggccgttttcgtggcccgcaaccgc
tttgctgttctggacaaggcgcacggcttgattctagtcaagaatctcaggaacgaggtc
tccaagagagtcgaggctccatctgcgacagttgatgccatcttctatgcggggacggga
actcttctctgtcgctcagacgacaagatgatcttgtttgacctccaacagaaggcggtt
ttgggagagattcacagcccccaagtgaagtacgtggtttggtcactggacatggaggcc
gtggctctggtgagcaagcatagcgtcgtcatgacgacgaagacgctggctctcaagtgc
agcgttcacgagactatccgtatcaagagtgctgcatgggatgacaaaggggtgctcttc
tacacgactctgaaccacatcaagtactgtcttccaaatggagataacggcaccatctcg
actctggacgttccaatctacataactcgggtggccggcgacaaagtctatttcctggac
agggaggggaaagttaagaccatcaccattgacacgacggagttcacgtttaagctggcg
ctgctccaggaacgatacgatcgagttttggaaatgatcaggagctctcgactttgtgga
caggcgatcatctcatatctgcagcagaagggattccccgaggtagccctgcatttcgtg
aaggacgagaggaccaagttcaatctggccatcgagtgtggcaacatcgaagtcgcagtt
gcttcagcaaaagagattgacgagaaggattactggtacaggctgggggtggaagcttta
aggcagggcaaccacgagattgtggagtacgcatatcagcgaacaaggaactttgagagg
ctgtcgttcctctacctgataaccgggaatttggacaagctgtcgaggatgctgaagatc
gcagagacgagaaacgacgtgatgggatgctttcacaacgccttatacctgggtgacgtc
gaagagcgggtcaagttacttgagaaaacgggacacgttcctcttgcatacgcaactgcg
gctgttcatgggcttgttgaggtggcggagcgtctggctacagagctgggtgacaaggtg
ccacagattcctaagcttgagaagtcgaagttgctagtgccgccatctccaattctccgg
gacagcaactggccgctgctcttgatcagcagaggctttttcgaaggcggctttgccgag
cctggggtagtggaccaagaggaagaaaacgctccggatgaatggggtgaagaactcgtc
atcataccaggcggagagtctcaaagaactggcgaaatggaagagatcgaggagattcaa
agagccggagctggagctgaggagggcgaagaagagggaggctgggagctggaagacctg
gaacttccgccggaggtggtgcagagccaaaacgctacaacgtccagcttcttcgctggt
gtaactccaggagctccggtcactcaactctggacgcaaaggtcctccttggctgccgat
cacgtggccgctggagccttcgacagtgcaatgcgcctcctcaatcggcaactcgggatc
aaaaacttcgcgccgctgcaactggtgttttgcgacctccacctcgcgagccagagctcg
cttggggccttcaagccggtggagtccctgacgtatggcctcgagagaggctggtcggac
tcgccgcctccaaacgtccgcaacgggccagcgctgatctacaagctctcccagctggag
gaccgagccaagcaggcctacaagctcaccaccgaaggcaaattcactgaagctctccgc
ctcttcctcgccatccttcacaccgtcccggtgattgtcgtggacagccgcaaagaggtg
gacgacgtcaaggacctgatcggcaagagcaaggagtacgtcctggcgctcaagatggag
ctcaagcgcaaggatctcagggacgagcccgtccgccaggccgagctcgcggcgtacttc
cctcactgcgacatccagccttcgcacgtccggctcggcttacagtcggctatggcggcc
tcgtatcggtgcgggaacttcgccacggcggcgcagctcgcgaggcgattgctcgacatg
aatccaaaccaggccagcatcgccaaggcgcggcagctcctccaggcgtgcgagaggaac
ccccgcgacgagaagaggatgaactacgacggcaggaacccgttcgtggtgtgtggagca
acgtttacgcccatctacgcgggcagcaggtcggtgtcgtgcccctactgcgctgctcgg
ttcgtccccgaggtggcgggcaggatttgcagcgtttgcgacttggcggtggtggatgct
gacgcttccgggcttgtgtgttgcccgactcaatcgcggtga

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