Selaginella moellendorffii: SELMODRAFT_447965
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Entry
SELMODRAFT_447965 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
SELMODRAFT_447965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_447965
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
SELMODRAFT_447965
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
HECT type E3
SELMODRAFT_447965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
9630793
NCBI-ProteinID:
XP_002990240
JGI:
447965
UniProt:
D8T3T3
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MEDASTTSSSSSKENVRLDVMKYFDEFRERGMLANEAAALALKVAYGNVDPPLDPASLLD
AIAKAGETRQYRELIETIKFAFSSVDVVSTCFLSKTPPNSDSSSSLVAGMELSLLEDFYV
SALRLEAPEVNLAIMEANEQLLASLLRSLKDGSWPSGSLRAVIIMLENRLFMEPDYYGTL
SRLWRLVLDAPQSFRASLFSALKEYDGKQLERLVVVIQQFITIQLYEFQQVNTMVVSGVE
ILGFIYSVNESSLRIGHSAFYNDAVNNDDFNLKDDFSRWVDPTRQQFSFCQYPFVFDPSS
KSKILQMDSIFQMTEEFEDAILRSVFIGMTCPYLILRVRRDFLVRDTIVQIQEQLGDLKK
PLKVVFVGEEGIDEGGVQKEFFQLLVRELFNPQYGMFSYSDEARCFWFNATPSELNFDTE
FELVGILLGLAIYNGHILDLHFPTVVYKKLLGKPLALDDLGQVKPDLAKGLEHLLRFTGD
VEETYSRTFQISEIDMFGRTATVNLKEGGENIDLNLQNRDEYVKLCVEYYLGKSIARQFE
CFSQGFRRLCKGRVLDLFQPVELEQLICGSPGLDFEALEKVAMYDDGYTKESRIIREFWE
VVHSFTEEQKRKLLFFTTGSDRAPIKGLSNLQFVISRNGPDCERLPTAHTCFNHLLLPEY
KTKEKLQERLLTAINNAEGFGLM
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgcctccaccaccagtagcagcagcagcaaggagaacgtccgcctggatgtg
atgaagtatttcgacgagtttcgcgagcgagggatgcttgcgaacgaagcagcagcattg
gcgctgaaggtcgcgtatggcaatgtggatcctcctctggatccagcgtctctgctggat
gcgatcgcaaaggccggagagacgaggcagtaccgggagctcatcgagacgatcaagttc
gcgttctcgtccgtggatgttgttagtacttgcttcctctcgaaaactcctccaaacagt
gattctagtagctccctagtggctggaatggagctatcgcttctcgaggacttctacgtt
tcggcactaaggctggaagccccggaagtcaatctcgcgatcatggaagctaacgagcaa
ttgctggcttcgttgcttcgctctctcaaagatggaagttggccatcgggatctttgcgt
gctgttattatcatgcttgagaataggcttttcatggagcctgattactacggtactctc
tcgagactgtggcgattggtcttggacgcaccgcagagcttcagggccagtttgttctca
gctttgaaagaatacgatggaaagcaattagagcggcttgtagttgtcattcagcagttt
atcaccatacaactttacgagtttcaacaagtaaacacaatggtcgtctcgggtgtagaa
attctgggattcatctactctgtcaatgaatcttcgctccggattggccactcggctttc
tacaatgatgctgtaaacaacgacgacttcaatctcaaggacgattttagtcgctgggtt
gatccaacaaggcagcagttctcattttgccagtatccgtttgttttcgacccgtctagc
aagagtaaaattcttcagatggactcgatatttcaaatgacggaggagtttgaggatgcg
attcttcggtcggtttttattggcatgacatgcccctatttaatactgagagtcaggcga
gattttctagttcgggacacaattgtgcagatccaagaacagttaggtgatttgaaaaag
cctttgaaggttgtgtttgtgggggaggagggaattgacgaaggtggggtacaaaaagag
tttttccagcttcttgttcgcgagcttttcaatccacagtatggaatgttctcgtacagc
gatgaagcccgatgtttctggttcaatgcaacaccgtccgaactaaatttcgacacggag
tttgaattggttggaattcttctgggactggccatttacaatggtcatatcctggatcta
cacttcccgaccgtagtgtacaaaaaactactggggaaaccattagctctggacgacttg
ggtcaggtgaagcctgaccttgccaagggtttggagcatctgttgagattcacgggtgat
gttgaggaaacgtattcacgaacgttccaaatctcggaaatagatatgtttgggcggaca
gccacggtgaacctgaaagaaggcggtgagaacattgatcttaacttgcaaaacagggac
gagtacgtaaagctgtgtgttgagtactaccttggaaaatccatcgcgaggcagttcgaa
tgtttctctcaaggatttcgccggctatgcaaggggcgagtccttgatctctttcagcca
gtggagctggagcagctaatttgcggcagccccgggcttgattttgaggcattggagaag
gttgccatgtatgacgatggctacacaaaagagtctcgtattatacgggaattttgggag
gttgtccattctttcacggaggagcaaaaaagaaagcttttgttcttcacaactggcagc
gatcgtgcccccatcaaaggcctctcgaatctccagttcgtcatctcgcgaaacggacct
gattgtgagaggcttccaaccgcgcatacgtgcttcaatcacctattgcttccggaatac
aaaactaaggaaaagctccaagagcgattgttaacagcaattaataacgccgaaggcttt
ggactaatgtga
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