KEGG   Selaginella moellendorffii: SELMODRAFT_447996
Entry
SELMODRAFT_447996 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
smo  Selaginella moellendorffii
Pathway
smo04120  Ubiquitin mediated proteolysis
smo04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    SELMODRAFT_447996
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    SELMODRAFT_447996
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smo04121]
    SELMODRAFT_447996
Enzymes [BR:smo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     SELMODRAFT_447996
Ubiquitin system [BR:smo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SELMODRAFT_447996
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     SELMODRAFT_447996
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd EIF3I YNR034W-A-like
Other DBs
NCBI-GeneID: 9631023
NCBI-ProteinID: XP_002990312
JGI: 447996
UniProt: D8T417
LinkDB
Position
Unknown
AA seq 436 aa
MVVAPGRPMQLVVIVQLLMSNGQDAAAKRRCCVVRPPPRCPRRLEMEQGSSSRWAFRVRA
TIKPFASHATETIGSVAFDSSNELMATGGIARKIRVYDISAILDSEEKQQQDQAADEDDE
DGLEDEDEEGRFVSSRRRARNTFDTDRSSLSVICAPSRLSSLQWRPGKTGTITCGDYDGV
VTEWSVERQIPLVERDEHGGRHVWSVDYATGMSDVCVSASDDGTARVWQGGMERSALTIR
APDSKPFCCAEFDPLSSTLLALACADGKVYVHDLRRPECPVWTLAHHRRAASYARFLDRE
RLVTASVDSTICVWDLAAPPAPRVVESFSQHQNVRNFVGLSVWRKGEMVACGSETNQAYV
YQVGSGGGGGGGGDQSFVLRHQFSSSSWSSSTDSSSARRNSSLASAVCWMEDCSCTLAAA
NSEGVLQILSGEFGGV
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggtagtagcacctggaaggccgatgcaactggtggtgatcgtccagttgctaatgtcc
aatggacaagacgcggctgcaaagcgtcgatgctgcgttgtgaggcctcctccccggtgt
ccccggaggctggagatggaacaagggagctcctcgcggtgggctttccgggtgcgtgct
acgatcaagccttttgcgtctcatgcgaccgagaccatcggctcggttgctttcgacagc
tccaacgagttgatggcaacggggggtattgctaggaagatcagagtctacgacatctcg
gcgatcctggactccgaggagaaacagcagcaggatcaggctgctgatgaagacgatgaa
gatggtctcgaagacgaagacgaagagggccgcttcgtgagctctcgccggcgtgctcgc
aacactttcgacacggacaggagctctctgtctgtcatctgcgcgccgtcgaggctgagc
agcttgcagtggcggccgggaaagacagggacgatcacatgcggcgactacgacggggta
gtgacagaatggagtgtggaaagacaaatcccgcttgtggaaagagacgagcacggcggc
cggcacgtctggagcgtcgactacgcgacaggcatgtcggacgtgtgtgtgtcggcctcg
gacgacggcacggctcgggtgtggcaaggcggcatggaaaggtcagctctcacaattcgg
gcacccgactcaaagccgttttgctgtgcagagtttgatcctctctcgagcacgctgctc
gcgctcgcctgcgccgacggcaaagtttacgtgcacgacttgcgaaggcccgagtgcccg
gtgtggacgctggctcaccaccgccgggccgcgagctatgcacggtttctagacagggaa
aggctggtgaccgcgtccgtggatagcactatttgcgtgtgggacttggcggctcctccg
gctccgcgggtggtggagagctttagtcagcaccaaaacgtgaggaactttgtggggctc
tcggtgtggaggaagggagagatggtggcgtgtggatccgagacgaaccaggcatacgtc
tatcaggtcgggagcggtggcggcggcggtggtggcggtgatcaaagctttgttttgagg
caccagttctcctccagttcttggagttcttccacggattcctcctccgcgcggaggaac
tcgagcttggcgagcgcggtttgctggatggaagattgctcgtgtactctcgcggctgcg
aactcggagggagtgctgcaaatcttgtctggggagtttggtggtgtttag

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