Selaginella moellendorffii: SELMODRAFT_448405
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Entry
SELMODRAFT_448405 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_448405
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_448405
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
SELMODRAFT_448405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-rbx1
Sina_RING
Prok-RING_4
zf-RING_4
zf-Nse
Med3
DUF4614
Rad50_zn_hook
Zn_ribbon_6
zf-RING_6
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
9639549
NCBI-ProteinID:
XP_002991435
JGI:
448405
UniProt:
D8T725
LinkDB
All DBs
Position
Unknown
AA seq
210 aa
AA seq
DB search
MNRLRIFSGRRRGLDLMSSPDSVSSSSSKGPGYASTSAAIVILDDDDDVQVCSPRSFAQA
VGDENHTEEDLLQLRLGFSGSKPPRKSRKLQSRARQQQQQPQQQQQQRHRSKRVHPTTID
LTTEDCEVVYERPQKKKMAAPAPPPAKEPSLTCGICFDTMKNETSTVCGHLFCGSCILSA
IQAQKRCPTCRRKLTNSMVHRIYISGNSTG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgactcaggatcttttcagggcggcgccgaggcttggacttgatgtcgagccct
gattctgtgagttcgtcgtcatcgaaagggcctggctatgcctcaaccagcgcggcgatt
gttatcctcgacgacgatgacgatgtccaagtctgttcgcccagatcgtttgctcaggcc
gtgggcgatgaaaatcataccgaggaagaccttctacaactgcgattgggattttccggg
tcgaagcctccacgaaaatcgagaaagctacaatctagagctcgacagcagcagcagcag
ccacaacaacaacaacaacaacgacatagatcaaagcgtgttcatcccacaacgatcgat
ctcaccacggaagattgcgaggttgtgtacgagagaccccagaagaagaagatggctgct
ccagcgcctcctccggccaaggaaccatcgctcacttgcggcatttgcttcgacacgatg
aagaacgagacgtccacggtttgtgggcatttgttctgcgggagttgcattctatccgcc
atccaggcccagaagaggtgcccgacttgccggagaaaactcaccaattcgatggtccat
cggatctatatctctggaaattccactggctaa
DBGET
integrated database retrieval system