Selaginella moellendorffii: SELMODRAFT_449132
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Entry
SELMODRAFT_449132 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K08518
syntaxin-binding protein 5
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_449132
Membrane trafficking [BR:
smo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
SELMODRAFT_449132
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
SELMODRAFT_449132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
Synaptobrevin
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
PEP5_VPS11_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
DUF7165
RAB3GAP2_N
Beta-prop_NWD2_C
KNTC1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
9640930
NCBI-ProteinID:
XP_002993402
JGI:
449132
UniProt:
D8TCS9
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MFKRVIQQKSSGSGEASSPKSVNSLKPTHVDLRLTVHHGIPASASVLAYEPGQRLLAIAS
RDGRIKIFGREGVEVLFKSPANAPCKYLEFVNNEGRLIHVTTRNEIEVWDLSTKELVSSK
TWEADISAFAVIQATAFMYVGDETGQVSVLHFNNEDRCFVQMQYTVPAHLTLSGLIDTDD
SSAPSVVSILPQPDAVHSRVVIVYGNGVIVLWGLHEAQVLAIRGGTEDQQRKLSGGKSSG
SDEEEKEPCCACWACPSGTLLACGYTDGDIWLWNIPVNPKGKAEKPDVSSSPVLKIILSS
EEFRMPVVVMRWSTSVKSDKGPSGYLYVFGGQEMGMAEVVTVLPVTDPTCQMQLPLRGPF
ADVIILPSGPSIGNGAMLVLSSPGSLDVYEEANIYDSIKAEKPPAQPVPFQLPLTFSTVT
CARLLAIPDQSIVASIILKIPRLMKGYVPPAFPSGMRWHVSGGNFSSTTVDRRSPPCLYI
TGHENGLINVWDASTPCLYFLASVNNRELVGSELASTCAIDFCPTVGLLAAGDEAGLVFV
YTMQGESGEGTCHFISKNEPSTKREIEYSAGFQCFAVLNLHTAPIRSLTIRTDCRCIAIG
DDNGLVTLFDIEACVVRFHGKCGSPSGIVSSCFISLPARDPKSFKQDTIVLVLLKDACIA
AIDGSSGKTIGSGRPNNPSVAISLHVLDPSGSSVKSVSRAPSRKASKRSVVMAVIETDSS
GSHIEPAEGNEEIEEDVKQDDDWTGSDNLVLLCSEDSLRVYSISSVLQGMRTTIRKERLE
KPCCAASVFDSGIHGSGLLLLYDTGDIEIRSLPALEVIKLTSLSESLRWEFGSSPSFFRT
FAVASNGRVTAVDADQEVLFMSVVADENDMRLPGSYPLLYDKDVATATEAAIKASVQAAK
KKQSQIQDLFGGVMKELKHSLGNAVGGERTALELPKLFSKQVSPVASHGTSIVKRLKAAA
SSESSSNERHNDRNAERQTDSPDKETELDIDDIDLGDDDLKSPSPSPSEGSVKKGGVMRK
LRSSFNKGKKKASIKGDEDEERNMLFEGGSTETKQSSKTPTMRTAEEIKAAYGHKRSAEA
SSAAAHARDRLMERQERLQNINRRTEEMQDNAENFASMAEELAKKMESRKWWEI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcgcgtgatccagcagaaatccagtggcagcggcgaggcatcgtccccgaaa
tcagtgaatagtctcaagcccacgcatgtggatctgagactgactgttcatcacgggatt
cctgcctcggcctctgtcctcgcgtatgagcccggccagcgtttattggcaattgcctcc
agggatggacggatcaaaatctttggccgtgaaggagttgaagttcttttcaaatcgccc
gcgaatgcgccttgtaaatatctcgagttcgttaacaatgaaggacgattgatccatgtc
acaactcgcaacgaaatcgaggtttgggacttgagtacaaaggagcttgtctcgtctaaa
acgtgggaagctgacatcagtgcgttcgcagttattcaggcaacagcatttatgtacgtt
ggagatgaaaccgggcaggtttctgtactccatttcaacaacgaggatcgttgttttgtc
cagatgcaatacacagttcctgcccatttgacattaagtggattgatagatacggacgac
tcaagtgcaccgtcggtggtgagcattcttcctcaacccgatgctgttcatagcagggtt
gttattgtctatgggaatggtgttattgtattgtggggacttcatgaagctcaagtcctt
gccatccgcggaggaaccgaagatcagcagagaaaactttctggggggaaatcttcaggt
agtgacgaggaagagaaggaaccgtgctgtgcgtgctgggcatgcccgtctggcacgcta
ctcgcttgcggctacacagatggtgatatctggttgtggaacatccctgtcaatcccaag
ggaaaagcagaaaaaccagacgtttcgagctcaccagttctcaagatcattttatcttcg
gaggaatttcgaatgccggtcgtggtgatgaggtggtctacttctgtcaagagtgacaag
gggcctagtggttacctttacgtgtttggaggacaggaaatgggaatggcggaagttgtg
acggtcttacctgtaacagatcctacttgtcaaatgcaactcccacttcgtggacctttt
gcggacgtgattatattgcctagtggcccgagtatcgggaacggagcgatgttggtgctt
tcatcacctggttctttggatgtgtatgaggaagccaacatctacgactctataaaagct
gagaagcctcctgctcaacccgttcccttccagcttcctttgacgttttctacagtcacg
tgtgcgagactgttggccattccagatcaaagtatagttgcgagtattatactgaagatt
ccacgcttaatgaagggttacgtgcctcctgcgtttccatcaggaatgagatggcatgtc
agtggcggaaacttcagctctactactgttgacagaaggtcgccaccctgtctctacata
actggtcatgaaaatggtctgatcaacgtttgggacgcttcaacaccatgtctctatttt
ttggcgtcggtgaataatagagagctggtaggatcggaattagcctccacatgtgctatt
gacttctgtccaacggttgggctgctagcagctggtgacgaggctggtcttgtttttgta
tatacaatgcaaggcgaatcgggggaagggacgtgccattttatcagcaagaacgagcca
tcgacaaaaagagaaatagagtattctgctgggtttcagtgttttgctgttctaaacctc
cacacagcaccaatcagaagcttaactatcagaaccgactgtcgttgtattgcaattggc
gatgacaatggattggttaccttgttcgatatcgaagcttgcgtggttcgtttccatggg
aaatgtgggagtccctcaggaattgtctcgtcttgttttataagtcttccagcacgcgac
ccaaaatcgttcaaacaagacactattgtacttgtgttactgaaggatgcgtgtattgct
gcaattgatggcagcagcgggaagactattggctctggtcgtcctaataatccttccgtt
gcgatttctctacatgttctcgatccatcaggatcgtcagtaaaatcagtatctcgagct
ccttcaaggaaagcctctaaacggtccgttgtaatggctgttattgagactgacagctca
ggtagccatattgaacctgccgaagggaacgaagaaatagaggaggatgtgaaacaggac
gacgactggacaggatctgacaacctcgtactattatgctctgaagattcattgcgcgtg
tattctatttcatctgttcttcagggaatgcgaacaacaattagaaaagaaagacttgaa
aagccttgctgcgcggcatcggtatttgatagcggaatacacggctccggtcttcttctt
ctatatgataccggtgatattgaaatccggtcgttaccagcgttggaggttatcaaatta
acctcgctaagtgagtctttacgttgggaatttggcagcagtccaagcttcttcagaact
tttgctgtagcatccaatggacgtgtaactgcagttgatgcagatcaggaggttttgttt
atgtcagtcgttgcagatgaaaacgacatgaggttaccgggctcttacccgctactatac
gataaagatgttgccacagcaacagaagcagccattaaagcgagtgttcaagcagccaag
aagaagcaaagtcagatccaggatctttttggcggagttatgaaagaattaaagcattct
ctaggcaatgctgtgggcggggagcgtacggcccttgagctccccaagcttttctcgaag
caagtgtcaccggtcgcctcccatggaactagtatagtgaaaaggctgaaggcggctgcg
agttcagagtcttcttccaacgaacgccataatgatcgaaatgccgagcggcagaccgac
agtcctgacaaagaaactgagttagatattgatgacatcgatctcggtgacgacgacttg
aagtcgccatcgccatcgccttcggaaggctcggtaaaaaagggcggtgtgatgagaaag
ttgagaagtagcttcaacaaaggcaagaagaaagcttctatcaaaggggacgaggacgag
gagagaaatatgctttttgaaggtggctcaacggagactaaacaatcaagcaaaacgccg
acaatgcgaacagccgaagagatcaaggcagcctatggtcacaagagatccgcggaggca
agcagcgccgcggcacacgccagagatcgattgatggaacggcaggagcgcttgcagaac
ataaaccggaggacggaagaaatgcaagacaacgcagagaactttgcatcaatggctgaa
gagctcgcgaagaaaatggagtccagaaaatggtgggaaatctaa
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