Selaginella moellendorffii: SELMODRAFT_449189
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Entry
SELMODRAFT_449189 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
smo
Selaginella moellendorffii
Pathway
smo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SELMODRAFT_449189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smo04131
]
SELMODRAFT_449189
Membrane trafficking [BR:
smo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SELMODRAFT_449189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_11
zf-Vps39_C
Methyltransf_25
Methyltransf_31
CNH
Methyltransf_12
Clathrin
Ubie_methyltran
TPR_Vps41
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
9663483
NCBI-ProteinID:
XP_002993618
JGI:
449189
UniProt:
D8TDG9
LinkDB
All DBs
Position
Unknown
AA seq
1808 aa
AA seq
DB search
MSGKTSAAAAASRPCAVRKAKNGGQKKQPQRGLGVAQLEKLRLQEQQQQQDFAFPPRPPA
PVDHQERASSELLLRGQADANESSQLYESSAILLARFDARYLSSIASSSSAAQLRIKAAG
FASTATDGVCRGNAHSRQQCPVLQLGTAPPQRNSKELSSFQIDRHQHWTSDDKTTLSSQR
KRPRLELWLRPKNVSPPNGSDLGVTRDNAPGGVEKSVMLATWLEKDDHQTDRTLATGTSL
NDSATPSPTVVNTSCSTVSSSPVVSERRPQVTAAGAFPDVEIESTPLSDFLTLGLASSPR
KSLKRNGAKDLHQLTSKSQQKDGTWINWIRIGGKAADGYADGVSLDLNLRLSIPDISAGP
CNSEESVGIFVLPFWGRASDKTIFPCGTPLESDLHKAEVTIEFLRARLVSERSICKICQL
ENRLEGEIARRKNAELATKELILALQYPAPPVAPSPTPRKHHSSDQKQKLATTRSPRPAN
DDDSGCNCKLTTIFSFPRSSKPCDSGASSSSSRKAEASPPPPPPPLREISLRHGIGEQAA
RISQSGRIIRAREDGGESLPRQQSKSMELIHYRSEEQQMWMASSHSEAQLSPSPSPRRVG
KSWFRRAMTDSMERRKLGAADRKVLKVAVEEFPLRSAAIPPCSITAAAVAQHREDSSVLV
YLGTDSGYLLLYSWKRSATAALQSPRIRPARSSPRNSQPSPPASPLRHSHSPSREGIDVE
SLKSNGSAASPERQRSDLRLVTLKSLGRAVEAVCVLEIVGQAAVLVDGQVLLVDFLSLES
LGSIPGCKGVTAIAHAISFDETRVPPSPRLADGGDRAHLAVAVRSKILLFEVVSWRQEKE
NVASPGGLPVTKLSLMRELFGIEGAHALAWVKNSIFIGTSREYILFTLRDSRATRLFSFP
VESPWKPLLKPFPKESLVLLVMDIAGIMVNEEGLPVGGSLVFSEIPDAVGQSSPYALVVN
KGVVELYHSQTGSKVQSLAYGSVPVEPPCLITDDNDGIIVIANGDKVSCFTRISVDDQLK
DLLKQKQYSEAVKLANEEEGAKSKLGMVHAEAGFLLLADLRFEEAIDHFLRSDIVEPTEL
FPFFPSLTSRWRNMVPRKRYWGLHAPPQPIRTVIESGLYSLQNGLLTSPIKSKQFQGGSR
SGQLMTQYQLEAFQCFGRYWETTRKRDLSSTSRDAGLQRSLKRLLPPAITAFCKNMLDCA
LETWHYLAQSAEQSATLETARLLERCFDTDLVLRHVLWVIRLDENMAFRILTSPQRTKAL
PADDVLRVLEADSTMIRQRYLQWLIDDQGFDDAHIHTELALSLSHSVLQADEGPDSRAAL
QSFLESSSKYDVGAVLDLIRGTNLWREQAILHRKQGNEKLALEILALKLQDSDAAENYCA
ELGRPDAYMQLRNSVPCFPWWLILVNSCRLLQTYLGNEGNNVKHAVRLLDRHGPQLDPIE
VLDALPPDMPLHLASQALVRTLRARIHLHRQGQIEKHLTRGINFQTRMKKLEERSREIQV
TGESVCSSCNARIGTKLFAVFPNESIACYKGLLRAGRMHRVALHPGATTITPAFGGLKFN
RKCSLIRAVAGNGPSRGFSSATRKQREDTRYGEEEYWNKRYAEEAFMTFDWYQRYADLQP
ILKKHIPKSARVLMAGCGNAVMSEDMVSDGYQNIVNVDYSSVLINALQFKYKHMPQLSYK
TMDVRNMAEFKDNTFDAAIDKGLVDAMVCATNGAGDVTQMLREMYRVIKPGGNFVMVTYG
FPLIRVPALMDRGMSWITNCWILPKPYSGSELSEYPSPIPMEVPNFINTKQEHYATGTNF
VYVATKRS
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtaaaactagcgctgctgccgctgcttccaggccttgcgccgtgaggaaggcg
aagaatggggggcagaagaagcaaccgcagcgagggctgggtgtcgcgcagctggagaag
ctccggctccaggagcagcagcagcagcaggatttcgcattccctcctcgtcctccggcc
ccggtggatcaccaggagcgcgcttcatccgagctccttttgcgtggacaagctgacgcg
aatgaatcatcacagctctatgaatccagtgccatcctcttggcaagattcgacgcaagg
tacttatcctcgatcgcctcctcctcctccgctgctcaactccgcatcaaggccgccggg
tttgcctcgacagcaacagatggagtttgccgtggtaacgctcactcacgccaacaatgc
cctgtcttgcagcttggcacggctcctccgcaacgaaattcaaaagagctctcttcattc
caaattgatcgccatcaacactggacttcggacgacaaaacgactttgtcgtctcagagg
aagcggcccaggcttgaattatggctccgtccaaagaatgtgtctcctccaaacggatca
gatctcggtgtcactcgtgacaatgctcccggaggagtggaaaaatcagtcatgcttgcg
acatggttggagaaggatgatcaccaaactgacaggacacttgctacggggacgtctctg
aatgattccgcgacgccatcgcccactgtggttaacaccagctgctccaccgtgtcgtcg
tctccggttgtctccgagagacggccgcaagtcaccgctgctggagctttccccgacgtc
gagatcgagagcacgcctctgagtgatttcctcacgctcggtctggcaagctccccgaga
aaatcgctcaagagaaacggtgccaaggatcttcatcaactaacaagcaagtcgcagcaa
aaggacgggacctggatcaactggatacgcattggtggcaaagctgccgatggctacgct
gacggtgtctcgttagacttgaatctgagactgtcgattccagatatttcagctgggcca
tgcaattcggaggaaagtgttggcatatttgtcctgccgttttgggggcgtgcgagtgat
aaaactattttcccatgcgggacgcctcttgaatccgacctccacaaagccgaggtgacc
atcgagtttcttcgtgcccgcctcgtttccgagcgctcaatctgcaaaatatgtcagctg
gagaacaggctagaaggcgagattgctcggcgaaaaaacgccgaactggcgacgaaagag
ctcatcctggcactccagtatcctgctcctcctgttgctccgtctccaacaccgagaaaa
caccatagctcggatcaaaagcaaaagctcgcgacgacgcgatcgccgagaccagcaaac
gacgatgacagtggatgcaactgcaagctgacgacgatcttctcgtttccacgctcgagc
aagccgtgcgatagcggagcgagctccagttcttcgcgcaaggcagaagcgtcgccacca
ccaccgccgccacctttgcgggagataagtttgaggcatggaatcggcgaacaggcagcg
cggatttcccagtcggggaggatcatccgagctagagaagatggcggcgagagtttgccg
cggcagcaatccaaatccatggagctgatccactatcgatcggaggagcagcaaatgtgg
atggcatcgtcccatagcgaggcgcaattgtccccatcaccatcgccgcggcgcgttgga
aaatcgtggtttagacgggcgatgaccgattccatggagcggcgcaagctaggcgctgcc
gatcgcaaggtactcaaggtagcggtagaggaatttccgctgcgatcggcagcgatcccg
ccctgctccatcactgcagctgccgtggctcagcaccgcgaggattcttcggttcttgtc
tacctggggacagattcaggatatttgcttctctactcgtggaaaagatcggccactgct
gctctccaatctcccaggatccgtccggccaggagctctccccggaattcacagccatcg
ccgccggcttctcctctcaggcactcgcattctccttcccgggaagggatcgacgtagag
tcgctcaagagcaatggatcggcggcttctcccgagcggcagcgtagcgatttgaggctc
gtgacgctcaagtctctgggacgggccgtggaagcggtgtgtgttcttgagatcgtcggc
caggcagcggttcttgtggatggccaggtactcctcgtcgattttctctcgttggaatca
ctggggagcattccaggctgcaagggcgtgactgccatagctcacgctatatctttcgat
gagacgagagtcccaccatcgcctcggttggcggatggtggtgatcgagctcatttggca
gtggctgtgaggagcaaaatcctattgttcgaggtcgtctcgtggcggcaagagaaagag
aacgtagcatcaccgggtggtcttccagtgacgaagctctctctcatgcgagaactcttt
gggattgaaggagctcacgctcttgcctgggtgaagaactccatcttcattgggacgagc
cgcgagtacatactcttcaccttgcgggactcccgagctacgaggctgttttcgtttccg
gtggagagcccctggaagcctctgctcaagccatttccaaaggagtcactggttctactg
gtgatggatattgcggggatcatggtgaacgaagaaggtcttcccgtgggaggaagtctg
gtgttctcggagattccagacgccgttggacagagctcgccgtatgcattggtcgtcaac
aagggtgttgtggagctctaccattctcaaaccggctccaaggtccagtcgctggcctat
ggctccgttccggttgagccaccttgccttataacggatgataacgatggaatcatcgtc
atcgccaatggtgacaaggtctcgtgtttcactcgaatttcggtggatgaccagctgaaa
gatcttttaaagcagaagcagtactcggaggctgtgaagctggcgaatgaggaagagggt
gctaagtcaaagcttggcatggtgcatgctgaggccgggttcttgcttcttgccgacctc
cgtttcgaagaagccattgatcacttcttgcggtcggacattgtcgagcctacggaatta
tttcctttctttccgtctcttacttctcgctggcggaatatggtccctcgaaagcgctac
tgggggcttcacgcacctcctcagccaatacgtacagttatcgaaagtggtttatattct
ctacaaaatggtctgctcacgtcgccgattaagtcgaagcagttccagggcggtagcaga
agtggacaattgatgacacagtatcaattggaagcttttcagtgtttcgggagatactgg
gagacaacacggaaaagagatttaagctcgacatcaagagatgccgggctacaaaggagc
ttgaagcgcttgttgccgccagcaatcactgccttttgtaagaacatgctggactgtgcg
ctcgaaacgtggcattatcttgctcaatcagccgagcagtcagccacactggaaacagct
aggctgctagagagatgttttgatactgacttggtactccggcacgtactttgggttatt
cgattggacgagaacatggcattccgtatactcacatcgcctcaaaggactaaagcactt
ccagcagatgatgttctacgagtacttgaagcggacagcaccatgattcgtcaaaggtac
ctacaatggcttatcgatgaccagggctttgacgatgcgcatattcatactgaactggca
ctgtctctttctcactcagtacttcaagctgacgagggaccggattccagagctgcttta
cagtcgtttcttgagagttcgagtaagtatgatgttggtgctgtgctcgacttgataaga
ggaacaaatctctggagggaacaggcaattttgcataggaaacagggaaatgagaaactc
gcactggaaatcctggctttgaaactccaggatagcgatgctgcagaaaactactgtgca
gagctgggccgccccgacgcatacatgcagttacgtaattcagtcccatgttttccttgg
tggcttatccttgtcaattcctgcaggctgctccagacttatcttggaaacgaaggaaat
aacgtaaaacatgctgttcggctacttgatcggcatggtccccagctcgacccgatagaa
gttttggatgctttgccacctgacatgccacttcacttggcatctcaggcgctcgtgaga
acgctacgagctcgcattcatctccatcgccagggccagatcgaaaagcacttgactcga
ggcatcaacttccagaccaggatgaaaaaactcgaggaaagatctcgggagattcaagtc
actggcgagagtgtctgcagctcgtgcaacgcacggattggaacaaaactcttcgcagtt
tttccaaatgaatcaatcgcttgctacaagggtttactacgggcgggaagaatgcatcgc
gtagcgctgcatccgggcgctacgacgatcacccccgcatttggggggctcaaattcaat
cgcaagtgctcgctcattcgggcagtcgctggaaatggtccgtcgaggggcttctcttcc
gctacgaggaagcagcgagaggacacgaggtatggcgaagaggagtattggaacaaacgc
tacgcagaggaggcgttcatgacattcgattggtatcaacgctatgctgatctccaacca
attttgaagaagcatataccaaaatctgcccgggttttgatggctgggtgtggcaatgcg
gttatgtccgaggatatggtgagcgatggctatcaaaacattgtcaacgtagattactcg
tccgtcttgatcaacgccttgcagtttaagtacaaacacatgcctcaactttcatataaa
accatggacgttcggaacatggccgaattcaaagacaatactttcgatgctgcaattgac
aaaggtctggtagatgcgatggtttgtgcgactaacggtgcgggagacgtaacccagatg
ctgcgagagatgtacagggtcataaaaccgggtggcaattttgtcatggttacgtatggc
ttccccctcatcagagtgcccgctttgatggaccggggcatgagttggatcacaaactgc
tggattctgcctaaaccgtactccgggagcgagctctccgaatacccgagccccatcccc
atggaagtcccaaactttatcaacacaaagcaagagcattacgcgactggcaccaatttt
gtctacgttgccaccaagcgctcatag
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integrated database retrieval system
