KEGG   Selaginella moellendorffii: SELMODRAFT_449890
Entry
SELMODRAFT_449890 CDS       T01496                                 
Symbol
RabF1-2
Name
(RefSeq) rab family GTPase
  KO
K07887  Ras-related protein Rab-5A
Organism
smo  Selaginella moellendorffii
Pathway
smo04144  Endocytosis
smo04145  Phagosome
smo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:smo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    SELMODRAFT_449890 (RabF1-2)
   04145 Phagosome
    SELMODRAFT_449890 (RabF1-2)
   04148 Efferocytosis
    SELMODRAFT_449890 (RabF1-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smo04131]
    SELMODRAFT_449890 (RabF1-2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smo04147]
    SELMODRAFT_449890 (RabF1-2)
   04031 GTP-binding proteins [BR:smo04031]
    SELMODRAFT_449890 (RabF1-2)
Membrane trafficking [BR:smo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    SELMODRAFT_449890 (RabF1-2)
 Endosome - Lysosome transport
    SELMODRAFT_449890 (RabF1-2)
Exosome [BR:smo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SELMODRAFT_449890 (RabF1-2)
  Exosomal proteins of other body fluids (saliva and urine)
   SELMODRAFT_449890 (RabF1-2)
  Exosomal proteins of colorectal cancer cells
   SELMODRAFT_449890 (RabF1-2)
  Exosomal proteins of bladder cancer cells
   SELMODRAFT_449890 (RabF1-2)
GTP-binding proteins [BR:smo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    SELMODRAFT_449890 (RabF1-2)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU RsgA_GTPase MMR_HSR1 GbpA_2 AAA_7 TniB AAA_16
Other DBs
NCBI-GeneID: 9651692
NCBI-ProteinID: XP_002972614
JGI: 449890
UniProt: D8RNC2
LinkDB
Position
Unknown
AA seq 205 aa
MGCAASRPVKGLPHLSDGSLENGSQDTKHLRVKLVLLGDSGVGKSCIVLRFVRGQFDPSS
KVTVGASFLSQTIALQDSSTVKFEIWDTAGQERYASLAPLYYRGASAAVVVYDLTSKESF
QKAQYWVKELQKHANAGIVLALVGNKADLDNLRTVSTDEARAYAESNSMFFTEASAKTAG
NINELFEEIAKRLPRGQPSLTVKQQ
NT seq 618 nt   +upstreamnt  +downstreamnt
atggggtgtgcggcttctagacccgttaaaggtttgccacatctgagtgacggttctctg
gaaaatggatcgcaagatactaaacacctacgggtcaagctggttcttctcggcgactcc
ggagtgggaaagagctgcattgttctgcgctttgtaagggggcagtttgatccgtcatca
aaggttactgttggtgcttcttttttgtcgcaaactatagctctccaagactcgagcaca
gttaagtttgagatatgggacaccgcaggacaagagagatatgcttcattagcaccactt
tactataggggagcttctgcagcggtggtagtctacgacctgaccagcaaggagtcattt
cagaaagctcaatactgggtcaaggagctacaaaaacatgcgaacgcagggatagttctt
gcgcttgttgggaacaaggccgaccttgacaacttgcgcacggtttcaacagatgaagct
cgggcttatgcagagagcaactccatgttctttacggaggcgtcggcgaaaaccgccggc
aacattaacgagctcttcgaggagattgcaaagaggctgcctcggggccagccctcactg
actgtaaagcaacagtga

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