Selaginella moellendorffii: SELMODRAFT_450679
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Entry
SELMODRAFT_450679 CDS
T01496
Symbol
CHR8-1
Name
(RefSeq) hypothetical protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
smo
Selaginella moellendorffii
Pathway
smo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SELMODRAFT_450679 (CHR8-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smo03036
]
SELMODRAFT_450679 (CHR8-1)
03400 DNA repair and recombination proteins [BR:
smo03400
]
SELMODRAFT_450679 (CHR8-1)
Chromosome and associated proteins [BR:
smo03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
SELMODRAFT_450679 (CHR8-1)
DNA repair and recombination proteins [BR:
smo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
SELMODRAFT_450679 (CHR8-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
9629470
NCBI-ProteinID:
XP_002989066
JGI:
450679
UniProt:
D8T0J0
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MEEDEELLQRLGVTAARAEDVERHVIAAQHHQVDGGGGGEHPEAIAKQLTVLQKEIDAVE
NGLERYEEDGGELHTTLAHDRLHSLNSKKKKLRARLKSLDGASPSTQEQRSCLLEDNDLD
AALDAASGLVETERDRLIRTGALTPFDRIKGFERRVQTLSDRQSLERDRLAETSLSNAVA
SLAAISRSRATTKLLDPAQLPTLEAPTREFRRPPKSLDVGRRKKRKRPLPESKWRRKKPH
KLPELAADDNDGMPSFSCHLILLTHGDDNDVNDEECDDDVILEGGLRIPLDIYDRLFDYQ
KTGVKWLWELHSLKTGGIIGDEMGLGKTVQVIAFLAALHHSRMYSPSIVVCPVTLTFQWK
REVEKWYPKFDVQVVHESAAPKGKKKEAEDSDASGDDSGDAKRDARLARWDGVVEKTVRS
PSGLIVTTYEQLRLLKDTLLDIDWGYAVLDEGHRIRNPDAETTLICKQLQTVHRIIMTGA
PIQNKLTELWSLFDFVFPGKLGVLPVFQAQFALPISIGGYANATSLQVSTAYKCAVTLRD
LIMPYILRRMKSDVEAKLTKKTEHVLFCSLTETQRACYRAFLASSDVERIFEGSKNALYG
IDILRKICNHPDLLEREASEKHADYGLPDRSGKLMVVSQVLNSWKDQGHRVLVFCQTQQM
LDIVEIFVESQGYTYRRMDGSTSVKQRPALIDEFNESSHVFVFLLTTKVGGLGTNLTGAN
RVIIFDPDWNPSTDMQARERAWRIGQTKDVIVYRLITRGTIEEKVYHRQIYKQFLTNKIL
RDPQQRRVFKSKDMRDLFVLHEDAEGDKTETSNLFPELKLPAAAESDGKEAAHGGEEGDQ
ITRDEQDGADESRLLQSLMQANGIHSAMDHDAILAVNDPERVKVDFEASRVAERAAEALQ
QSRLIRMRDDVAVPTWTGNSGAAGAPGGGRRRFGAAVNSRLMSPAPPPGTPGASSSRALS
SVELLAQMRQRQAGAVESKREALRSELERFLRSHGGSALSTTVVQHFKLKLSQAELPLFR
QLLNEIATLNKDGGESRWILKHD
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgaggagctgttgcagcggctgggcgtgacggctgcacgagctgaggac
gtcgagcgccatgtcattgctgcgcagcaccaccaggttgatggcggcggcgggggcgag
cacccggaggctattgccaagcaattgactgtcttgcagaaggagattgacgctgtggag
aatggtctggagcgttatgaagaggacggtggtgagctccacaccactctcgcgcacgac
cgtctccactctctcaactccaagaagaaaaagctgcgagcccgattgaagtctctggat
ggagcgtcaccttccacacaagaacaacgctcttgcctcctggaagacaacgacctcgac
gcagctctggacgcagcctctgggcttgttgagactgagcgtgacaggctcatccgcacc
ggggcactgacgccgtttgacaggatcaaaggcttcgagcgccgagtacagacgctaagt
gatcgacagtcgctggagcgggaccgattggccgagaccagcctctctaatgccgtcgcg
tcgctggccgcaatatctcgctctcgagcaaccaccaagctgctcgatccggcccagctc
ccaacgctcgaggcgccgacgcgtgagtttcgaaggcctccaaagtcacttgacgttggg
aggaggaagaagcgcaagcggccgctgcctgagtccaagtggaggcggaaaaagcctcac
aagctaccagagctggcagcagatgacaacgacggtatgccatctttctcgtgtcatctc
atcttattaactcatggcgacgacaacgacgttaatgatgaggaatgcgacgacgacgtg
atcctggaaggagggctcaggattccgttagatatctacgacaggctcttcgattatcag
aaaactggagtcaagtggctgtgggaactgcactctctaaaaacaggggggatcataggc
gatgagatgggactaggcaaaacggtacaggtcattgcatttctggctgccttacaccac
agtcggatgtactcgcccagcattgtcgtctgtcccgtgacactaactttccagtggaag
cgggaggttgaaaagtggtatcccaagttcgacgtgcaagttgtgcacgagtcggctgct
ccgaaagggaagaagaaggaggcggaggattccgatgcaagcggagatgacagtggcgac
gcgaagcgtgatgcaagactagctcgttgggacggggttgtagaaaaaactgtccggtcg
ccttctggtctcattgtgacgacttatgagcagctccggttgctgaaagatacactgctg
gacatagactggggctatgcggtactggacgaagggcacaggataaggaatccagacgct
gaaacaactctcatctgcaagcagctacagactgttcaccgcattatcatgaccggtgct
cctatacaaaacaagcttacagagctgtggtctctcttcgacttcgttttccccggaaag
ctgggagtccttccagtgttccaggcccagtttgctctacctatatccatcggtggctat
gcaaatgcgacatcgttgcaggtctccactgcctacaagtgtgccgtcacccttcgggat
ctgatcatgccttacattctccgccgcatgaagtccgatgttgaagccaagctcaccaag
aagacggagcacgttcttttctgtagcctgactgagacgcagcgcgcctgctaccgtgcc
ttcttagcaagctcagacgtggaacgcattttcgaggggagcaagaacgcactctacggc
attgacatactgcggaagatctgcaaccatcctgatcttctggagagggaggccagcgag
aagcatgccgactacggcctaccagatcgaagtgggaagctgatggtggtcagtcaggtc
ctcaactcgtggaaggatcaggggcacagagtacttgttttctgccagacgcaacagatg
ctggatatcgttgagatctttgtagagtcacaggggtatacatacaggagaatggatggc
tccacatctgtgaagcagcggccggctctaatcgacgaattcaacgagtcttcacatgtt
ttcgtcttcctattaactaccaaagtcgggggcctgggaaccaatcttactggtgcgaac
agagttattattttcgatccggactggaacccttcgactgacatgcaggctagagaaagg
gcttggagaatcgggcagacaaaggacgttattgtttaccgtctaattaccaggggaacg
attgaagagaaggtgtaccatcgccaaatatacaagcagtttttgacgaacaaaatcctc
cgggatccccaacaacggcgtgtattcaagtccaaagacatgcgagatttgttcgtgctg
cacgaagatgcggagggagacaaaacggagacatcgaacttgtttccagagttaaagctt
cccgctgcggctgaaagcgacggcaaagaagcggcacatggtggcgaggaaggtgaccaa
atcacaagagacgagcaagatggtgcggatgagtccaggcttctgcagagcttgatgcag
gccaacggaatacactctgcgatggaccacgatgcaatcctggctgtcaacgatcccgaa
cgggtgaaggtggactttgaagcgagcagggtggccgaacgagctgccgaagctctccag
cagtctcggctaatacgaatgcgagacgacgtggctgttcccacgtggacagggaactca
ggcgctgctggggctccaggtggtggacggaggaggtttggagctgccgtgaattctcgc
ttgatgtctcctgcgccacccccggggacgccaggtgcatctagcagcagggccctcagc
tcggtcgagctcctggctcagatgaggcaacgccaagcaggtgcggtcgaaagcaaacga
gaggcactacgtagcgagcttgagaggtttctgaggagccacggcgggagtgcactgtcg
acgacagtcgttcagcacttcaagctgaagctgtcacaagcggagctaccgcttttcagg
cagctgctgaatgagatagcgaccttgaacaaggatggtggggagtccaggtggattctg
aaacacgactag
DBGET
integrated database retrieval system
