Selaginella moellendorffii: SELMODRAFT_451020
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Entry
SELMODRAFT_451020 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
smo
Selaginella moellendorffii
Pathway
smo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SELMODRAFT_451020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smo03032
]
SELMODRAFT_451020
Enzymes [BR:
smo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SELMODRAFT_451020
DNA replication proteins [BR:
smo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
SELMODRAFT_451020
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
SELMODRAFT_451020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
PDDEXK_1
AAA_30
AAA_19
Cas_Cas4
UvrD-helicase
GA
Dna2_Rift
nSTAND3
Helicase_RecD
AAA_16
Motif
Other DBs
NCBI-GeneID:
9656500
NCBI-ProteinID:
XP_002960058
JGI:
451020
UniProt:
D8QPC1
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MPRKGKRPPKASAAAQPARFGIQHFFQRQASPSSQPQEIALPVKQEHVDNGHRKRVKLPP
SEVSASPQGSDDGSDEIVWEASPTAERWQGLKLALRPCQSGKNVGISITSPRLKLNDPNK
ENVPITQPTSKQQLLRVPSPAPQCKVLLDLLDQVELVISDDKKAPGSEPCVVQPASHIPK
NDDEQHTNVSRIAEDTKPDIYYLVLEVTESEYQKEHGPGCYPQKVLRLFDEKNAVEKLVH
LRDEWSSSVIRPGDTVNIIGDFGADNKCIVDHKANLLVLHPDVLVSGSRVGSSFSCSRRA
VLNERLKSFDSSMAALLGTMLHRLFQKALTAEKPSHDDLQVQAKRIVLDHIDGLYALAGN
EKEALIKLVDAIPPLLDWLQTYRNPKESSEANIDFGMGTGERRVAITEVVDIEEMILSPK
YGLKGMIDASVRVDEEHMPLEFKTGRATTGQAGVEHRAQVILYTLLMSDRYSQDVNQGML
YYLHTKQTLGIQAQRADVTGLLMRRNEHASHLLRALSTQALPPMLQSSHMCRGCPLLDVC
TMYHKVCAHKCRCFRDPDNELQLQDGGTGESSGLGEVFDAFTAHLNHKHGKFLQHWEHLI
DLEAQLHFSSQSEIWRTYGGQREERNRCLSSMVITSFNDDKERPGSVIYRFQKAASSSNL
QKGNQEQIFTLGDYVLLSTESGFFALAGGIVRSVNPDCVMVSVSRALRLPGTTKANRIFH
EVWRLDRDDSSSSFAVMRYNVLQLFVRDGARRSRELIVDLEAPVFDNFLRVSQDPASTYV
NTLTNLNKDQRSAIGKIISARDYCLILGMPGTGKTSTIVYAVRALLLRGLSILLASYTNS
AIDNILLKLKSQGVDFVRVGRPETIHPELVQHAIGTNVTSVDELSLKISQARVVGATCLG
ITHALFSRRKFDVCIVDEAGQITLPVCLGPLRYARAFVLVGDHYQLPPLVQSAEAREKGM
AISLFRKLSEAHPFAVAALEFQYRMCSAIMNLSNVLIYGNRLRCGSTEVANARLYVDISK
GLPPWTQQVNESVLSGYRFRINADNISSQDRHHGHAKHNSVECSVLIDILHNLKKGGVDT
RSVGVISPYKGQVDYIRQRISDNGAGLADVEVHTIDKYQGKDKDCILVSFALSEDHRVLG
SLLTDWHRINVAITRAKKKLIMIGSMKALSSIPLLGLLIQQVQDQGGLVRLPEDPYKTEE
NDHEPEDIGHHVSSAVCHLKNQVMMNVKGELVVTPQPHWNLLREANLYK
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagggcaagcgtccgcccaaggcatcagcggcagcgcagccagcgaggttc
ggcatccagcatttcttccagcgccaagcatcgccctcctcgcagccgcaagagatcgcg
cttccggtcaagcaggagcatgtcgacaatggtcataggaaacgtgtcaagctgccgcct
tcggaggtttcggcgtcgccgcaggggtctgatgatggaagcgacgaaatcgtctgggaa
gcctcccccactgccgagcgatggcagggcttgaagcttgctttgcgcccctgtcaatca
ggaaagaatgtgggtataagcatcacctcgcctcgtctcaagctgaatgatccgaacaag
gaaaatgtaccaatcacacagccaacgagcaaacaacagctgttgagagtcccgtcccca
gctccacaatgcaaggtgctgcttgatctactcgatcaggttgagcttgtaatttctgat
gacaagaaagctcctggaagtgagccttgtgtggtccaaccggcaagtcacattccaaag
aatgacgatgaacagcacactaacgtttctcggatcgcggaggacactaagccggatatt
tattatctagttcttgaagtaacagaatccgagtatcaaaaggaacatggtcctggttgc
tatcctcaaaaggttttgcggctgttcgatgagaaaaatgcggttgagaaactagttcac
cttcgtgatgaatggagttctagtgtcatacgacctggtgatactgtaaacataatcgga
gacttcggggctgacaacaagtgcatagttgaccacaaagctaatttgcttgtacttcac
ccagatgtgcttgtttctggatcacgggtaggatcaagtttcagttgttccagaagagct
gtcttgaacgagaggctcaagtcgttcgatagttctatggctgcattgctagggacaatg
cttcatcgtctctttcagaaagcgttaactgctgaaaaaccatcgcatgacgatttgcaa
gttcaagccaaaaggattgttttggatcatatagatggtttgtatgctctagcagggaat
gaaaaggaagcgctcatcaagcttgttgacgccattcctccactattggactggttgcaa
acctacagaaaccccaaggaatcatctgaagctaatattgactttggtatggggactggt
gaacgccgtgtcgccattacagaggttgtagatattgaggagatgatcttgtcgccgaag
tacgggctcaaaggaatgatcgatgcatcggtaagagtcgacgaggaacacatgcccctt
gagttcaaaacggggagagcaacaactggtcaggctggagtagagcatcgtgcccaggtt
attttatacacgcttttgatgtccgacaggtattcccaagacgtgaatcaaggaatgctg
tattacctgcataccaaacagactctgggcattcaggctcaacgtgcggacgttacaggt
cttttgatgcggcggaacgagcatgcatctcatctgcttcgtgctttgtcaactcaggct
ttaccgccaatgttgcagagctcgcacatgtgccgtggatgcccgctccttgacgtgtgc
actatgtaccataaggtgtgtgctcacaaatgtcgatgttttcgagaccctgacaatgag
cttcagttgcaagacggtggaacgggagagtccagtgggctcggggaagtttttgatgca
ttcactgcccacctaaatcacaagcatgggaaatttcttcagcattgggaacatttgatt
gatttggaagctcaattgcatttttcctctcaaagcgaaatatggagaacttacggtggt
cagcgggaagaacgtaatcgatgtctttcgtcaatggtcataacatccttcaatgatgac
aaggaaaggcctggaagcgttatttatcgttttcaaaaggcagcatcatcgagtaatcta
caaaagggtaaccaggaacaaatattcacattaggagattacgtgttgttgagcacggaa
agtggttttttcgcacttgccggaggtattgtcagaagtgtcaaccctgactgcgttatg
gtctccgtatctcgtgcgctaaggttgcctggaactaccaaggcaaacagaatatttcat
gaagtgtggcgactagatagggatgatagtagttcctcttttgctgttatgagatataat
gtgttacaactttttgtgagagatggggctaggcgttcccgcgaacttattgtcgatctt
gaggcaccggtgttcgacaattttttaagagttagccaagaccctgcttcaacttatgtt
aatacactaacaaatctgaacaaagaccagcgcagtgctatcgggaagataatctcagcc
agagactactgtctaatactgggaatgcctggcacaggaaagacctcaacaatcgtctat
gcggtacgggctctgctcttaagaggcttgtctattttgttggcgtcgtacacgaactct
gctattgacaacatacttttgaaactgaagtcccagggcgtagacttcgttcgtgtgggt
aggccagaaacgattcatcccgagcttgttcaacatgccatagggacaaacgtgacatct
gtcgacgagctgagtttgaaaataagtcaagctcgagtagttggagcgacttgccttggc
ataacgcacgctttattttccagacggaagttcgacgtctgcatcgttgacgaggctgga
cagattactttacctgtttgtttaggaccgctgcggtatgcacgagccttcgttcttgtt
ggtgatcattatcagctccctcctcttgttcagagtgcggaggctagagaaaagggaatg
gctatcagcctctttcgcaagctttccgaagcgcacccatttgctgttgcggctcttgaa
ttccagtatcgtatgtgctcagccataatgaacctttcgaatgttttaatttatggcaat
cgtttgagatgtggatcaaccgaagtcgccaacgctcggctttatgtagatatttcaaag
ggattacctccatggactcaacaggtaaatgagtctgttttgtcgggttacagatttcgg
ataaatgcagacaatattagctcacaagataggcatcatggtcacgcaaagcacaactct
gtcgagtgttctgtattgattgatatactccataatttaaagaaaggtggtgtggataca
cgctccgtgggggtgatcagcccttacaaaggccaggtagattacatcaggcaacggata
agtgacaatggtgcaggcctcgcggacgtcgaagtccatactatcgacaaataccaggga
aaagacaaggattgcattctagtatcgtttgcgctatccgaagatcatcgagttttagga
tcccttctaacagactggcatcgaatcaatgttgcaataaccagagccaagaaaaagctt
atcatgattggctccatgaaggcactttcgtcaattccattgcttgggcttcttattcag
caggtgcaggaccaaggcggcctagttaggcttcctgaagatccatacaagactgaagaa
aacgatcacgagccagaagatatcggccaccatgtctccagtgcagtatgccatctcaag
aatcaagtgatgatgaatgtcaaaggtgagctggttgtcacgccacagcctcattggaac
ttgctgagggaggccaatctctacaagtaa
DBGET
integrated database retrieval system
