Selaginella moellendorffii: SELMODRAFT_451250
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Entry
SELMODRAFT_451250 CDS
T01496
Symbol
RRP5-2
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
smo
Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smo03009
]
SELMODRAFT_451250 (RRP5-2)
Ribosome biogenesis [BR:
smo03009
]
Eukaryotic type
90S particles
Other 90S particles
SELMODRAFT_451250 (RRP5-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
OB_RRP5
Spt6_S1
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT_Syf1_M
TPR_16
Motif
Other DBs
NCBI-GeneID:
9650879
NCBI-ProteinID:
XP_002972371
JGI:
451250
UniProt:
D8RN85
LinkDB
All DBs
Position
Unknown
AA seq
1634 aa
AA seq
DB search
MRLWGAVSGINKTDLSISLPNGLHGFVKIDEAFPEYTPDLSDDKLMISSVKSIEDHGYVL
SFGLPEMSGFLLHKDHQGEKLRVGEIMQSCVSAIDKKRGVINLTTMQLSSAMKEHENLSL
GTLVPGALVNGCVQAVLRNGVLLSFLTYFTGIVDIFHLQSVLSSKDWAQDYTEGKRFKAR
IIFIDARTKRIRLSLRSHLVDAEIVSLNRGDVIEAARIKRVDPAIGLLLELPATPHVAGY
VNHADVSDVKVDKLEKKFKDGQRVRARIIGFRLMDRMATLTLKPGALVHGVITRVEACGA
LVSLGGVKGLCPVQHMSEYNRLKPSSKFEVGKKMKFRVLQYDHEKKKLSLTFKKSLVSSK
LPLITAYEDAVDGLVTHGWIQGISNIGCFMEFYNHVKGLVHRSELGIGPDTPIEAAFHVG
QVVKCRVLESDLSKRRLRLSFNMSLRYNVKPGSVVSAVITQMGSSQIELQVNDDIASTMS
YEHLSDTPGQEHSKLVLTAKYSLIDAAESLPSSIHQLSPMAVLPGYISVIHDKYCLVSFL
DNVTGLVPIGNASDGYLEDLSQVFFVGQSVRAQVLEVDSENEKFVLSLKQSACFSTDVSL
IQGYFLEEELIAKLKEKEGLDWGNKLQIGELVEADVQEVKDYGIILNLKDNADVVGFATH
YQSNSPVEVGAAVKACILDVVKTDGIVDLSLQKRMLKFKKTKAVLQLHQRVEVVVELVKD
EYLVLSLPKFENSIGFASTRDYNIRVLRPHDHYSPGQKFSATIYSFGSESVGERTLLLLA
DTKPTFFTYVKNDIGANHRRPGLFNLSGSFILILTILYQIQEISSLHMIIQAGISLRGNV
HITEVVDQYEEGNPLRKYNAGQTVRAKILSKRKTSRKHGNAPTLDLSLRPSELTGNDSAR
SVITFETVTIGQTVVGYVQEVKESWAWLVLSPHLRGRLFILDSSDDPSELERFQERFKVG
DAFQCHIRSVNHEKKQVDLSLRPKDEDFKKGDLLGGRITRVRPGDGGLTVQVGWETFGRV
HVTHLGDTWMDDPASLFTEGKFVRCRVLDLKPTLKGTKSLELSLRPSLGGHGGFESLPSY
QTLERKSNACIVNSVSELQQDMQVQGFVKDLTEKGCFVILSPSVDARILLKNLSSSFVQN
PAEMFPAGKLVSGRILSVRPLSGHVEMSLTTSQESSSWKTFCAGDIVSGRIRSIEAFGMF
VALADSDGVGLCHVSEVSDDFIQDLPTLYKVGQRVQVKILKVDAETKRISLGMKASYLTP
DDGLETMDEEPVAEEPSTANVLMETDEKEEDYLDLDTEATPMATDVDPLEVNLEEDVEDK
VPVEDEKPLTAEESKKKTKKEKKRLKEQREAAVRAAEEKFLQKDQPPETEDDFERLVAAS
PNSSYVWIKYMAYWLRLADPDKARAVADRALETINYREEMEKMNIWTAYINLENSYAPSP
REAVSALFERAMKYCDPKKLHLSLLGVYESTNQHEMTDALMKSMTRKFKTSTKVWLRHVS
NLLGRGLSDKARKAFEQACVALPRHKHIKFISRAAILEFKSGSPERAREIFDGVLRNYPK
KTDLWSVYLDQEIRLGDTAIVRNLFERATCLDLPAKKMKFLFKKYLDFEKGQGDETRIEH
VKTKAMEFVEAKAG
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgcgactctggggcgctgtttctggcatcaataagactgatctttccatcagccttcca
aatggattgcatggatttgttaaaatagatgaggcatttcccgagtatactccagatttg
agcgacgataagctgatgatttcttcagtgaagagtatcgaagaccatgggtatgtcttg
tccttcggcttgcctgagatgtcaggtttcctgctccacaaagatcatcaaggtgagaaa
ttgcgtgttggtgaaataatgcaaagctgtgtctctgcaatcgacaagaagcgtggtgta
atcaacctcacgacgatgcaactatcgtctgctatgaaagagcacgagaacctctcgcta
ggaactcttgttcctggcgcgttggtcaatggatgcgtccaagctgttttgagaaatgga
gtacttctttccttccttacatattttacgggaattgtggacatttttcatctgcagagt
gttctttcgagcaaggactgggcacaagattatactgaaggaaagcggtttaaggcacgc
attatattcatcgatgccagaacgaaacgcattcgcttgagtttgagatcgcatttagtc
gatgccgaaattgtctctttgaacaggggcgatgttattgaagctgcaaggatcaaaagg
gtggatccagcaattggtcttcttttagagcttcctgctacacctcatgtggctggttat
gtcaatcacgcagatgtttctgacgtgaaagtcgacaaactagagaagaagttcaaggac
ggccagcgagttagagcccgaataattgggttcaggctaatggataggatggcaactctg
actcttaagcccggcgcgcttgttcatggcgtaataacgagagtggaagcatgcggggcc
cttgtatctctcggtggagtgaagggactctgtccagttcagcatatgtccgagtataat
cgtttaaaaccatcatcgaagtttgaggttggaaaaaaaatgaagttccgggtacttcag
tatgaccatgaaaagaaaaaactctctctaactttcaaaaagagtttggtgtcatcgaag
ctgccgctaataacagcatatgaggatgctgtcgacgggcttgtaactcatggatggatc
caaggaatcagcaacattggatgctttatggagttttacaatcatgtgaagggtcttgta
cacaggtccgagttaggaatcggtcctgacacaccaattgaagctgcttttcacgttggg
caagttgtgaagtgtagagtattggagtcagatttaagcaaaagaagacttagattgagc
tttaacatgtctttgaggtacaacgtcaagcctgggagcgtggtttctgctgttatcaca
caaatgggcagttcgcaaatcgagttacaagttaacgacgatatagcctcaacgatgtct
tatgagcatttaagtgatactccgggtcaggagcactcgaagctggttttgacggcaaag
tactcccttattgacgctgctgaatcacttccatcatccattcatcagctttctccaatg
gcagttttaccgggctatatttccgtcatacatgacaaatactgcttggttagttttctg
gacaatgtcacaggccttgtacccatcggtaacgcgtccgatggctacttggaagatctt
tctcaagttttctttgttggtcaatccgtacgagctcaagttttggaggtcgattctgaa
aatgagaaatttgttttgagcttgaaacagtctgcatgcttctctacggatgtttcactt
atacaagggtactttctagaagaggaattgatagcgaagttgaaggagaaagaaggtcta
gattggggaaataaattgcaaattggagaactggtcgaggctgatgttcaagaggtcaaa
gactatggcatcattcttaatcttaaggacaatgcagacgtcgttggcttcgccacacac
tatcaatctaatagtccggtagaggttggtgcagcggtgaaagcgtgtatccttgatgtc
gttaaaacagacggcattgtcgacctttctctgcagaagagaatgttgaaattcaagaaa
acaaaggctgttctacaacttcatcagagagtagaagttgttgtggagctcgtgaaggac
gagtatctggttttatcactgccaaaatttgaaaattccattgggtttgcgtcgactcgt
gactataatatcagagtgctgcgacctcatgaccattacagccctggacaaaaattttcg
gcaactatttattctttcggatccgagtctgtaggtgaaagaacgcttctgctgcttgcg
gatacgaaaccaacctttttcacctacgtgaagaatgatattggtgcaaatcatcgaagg
ccaggtttgttcaatttatctggaagctttatattgattcttaccattctatatcagatc
caagaaatttcgtcactacatatgatcattcaggccgggattagtttacgtggaaatgta
cacattacagaggttgtcgatcagtatgaagaagggaatccgttaagaaagtacaatgct
gggcagactgttcgagctaaaatcctttcaaaacgcaaaaccagcagaaagcacggaaat
gctcctactttggatctatctctacgtccatctgagcttacaggaaacgactctgcacgc
tcagtcatcactttcgagaccgtaaccattggccagacggttgtcggatacgtccaggaa
gtgaaagaaagttgggcatggttagtcttgtcaccccatctgaggggccgcctttttatc
ctggactcttctgacgatccctcggagcttgagcgtttccaagagcgcttcaaagtcggt
gatgccttccagtgccatataagaagtgttaaccacgaaaagaagcaagtggatttgtca
ctgcggccaaaagacgaagatttcaagaagggcgacctgttaggcggacgcattacacga
gttcgtcctggtgatggcgggcttacggtgcaagtcggctgggaaactttcgggagagtt
cacgtaacgcacctgggtgatacgtggatggatgacccagccagtctattcacagaggga
aagttcgtaaggtgcagggttttggatttgaagccaacattgaaggggacgaagtccttg
gaactttcattgagaccatcgctcggtggacatggtggttttgagtcgcttccgagctat
caaacgcttgaaagaaagtccaacgcttgcattgtcaattccgtgtcggagcttcagcaa
gatatgcaagtgcaaggttttgtcaaggatctgacggagaaaggctgctttgtgatcctg
tcaccttcagtcgacgctaggattcttttgaagaacttatcgagctcgtttgtccaaaac
cccgcagaaatgtttcccgcaggcaagctggtatcgggaagaattctaagcgttcggccc
ttgtctgggcacgttgaaatgtcattgacaacatcacaagaatcaagtagctggaagact
ttttgcgctggtgatatcgttagtggccgcatacgcagcatcgaagcattcgggatgttc
gtcgcccttgccgacagcgatggtgttggcttgtgtcatgtctccgaagtatctgatgat
tttattcaagacttgccaacactttataaagtcggccaacgggtacaagtaaaaatcctg
aaggttgacgcggaaaccaaacgtatttcccttggaatgaaagcgtcgtatctgacccct
gacgatggcctcgagacgatggacgaagaacctgtagccgaagagccttcgactgcgaac
gtgcttatggaaactgacgaaaaggaggaggactacttggatctggacaccgaggcgact
cctatggctacggatgtcgatccactggaagtcaatctcgaagaagacgttgaggacaaa
gtgccagtagaagacgagaagcctctcacagcggaagagagcaagaaaaagaccaagaag
gagaagaagcgcttgaaagagcagagggaggctgccgttcgagcagcagaagagaaattc
ttacagaaggaccagcctccagaaaccgaagacgactttgaaaggcttgtagcagcatcg
ccaaacagtagctacgtgtggatcaaatacatggcttactggttgcgtctcgcggacccg
gacaaagcgcgagcagtggctgacagggctttggagacgataaactaccgagaagagatg
gaaaagatgaacatatggacggcttacatcaacctggaaaactcgtatgcaccctctcct
cgggaggccgtgtctgcacttttcgaaagagcgatgaagtactgtgatcccaaaaagctt
cacttgtccctgcttggcgtctacgagagcacaaaccagcacgaaatgactgacgcgctg
atgaaatcgatgacacgcaagtttaaaacctctaccaaggtgtggctgaggcatgtaagc
aacttgctaggccgagggctgagcgacaaagcacgcaaagcctttgagcaagcatgcgtc
gctctccctcgccacaagcacatcaagttcatctcgcgagccgccatcctcgagttcaag
tcgggctcgccagagcgagcgcgcgagatcttcgatggcgtccttcgcaactatcccaag
aagacagacctctggagcgtatacttggaccaggaaattcgactaggagacactgcaatc
gtcaggaacttgttcgagagagctacgtgcctggatttaccagcaaagaagatgaagttc
ctcttcaaaaagtatctagacttcgagaaaggccagggcgacgagacccggatcgagcac
gtaaaaacgaaagctatggagttcgtagaggctaaggccggatag
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integrated database retrieval system
