Selaginella moellendorffii: SELMODRAFT_50521
Help
Entry
SELMODRAFT_50521 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
smo
Selaginella moellendorffii
Pathway
smo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SELMODRAFT_50521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smo04121
]
SELMODRAFT_50521
Enzymes [BR:
smo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
SELMODRAFT_50521
Ubiquitin system [BR:
smo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
SELMODRAFT_50521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
9657819
NCBI-ProteinID:
XP_002978158
JGI:
50521
UniProt:
D8S3U2
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
EDEEDVCRICRTSGEDGSPLYYPCACSGSIKYVHQECLLQWLNHSNAKQCEVCKHQFSFS
PVYAEDAPTRLPVTELVYGMVAKAGRGLRFFSRLVLVLSVWLLFIPFTTFWIWRMTFVRS
LGDAQKLFVTRFLTPAFLFADCLNGFLISAGIVFIFLGATSLREYFRHIREVAGQEADRQ
QHAPPANGDGGAGQGQGLAAGAGEIIRRNAENVAARIEAHVEQMFEADDPDGAEDVPFDE
LVGMQGPIHHLIENAVTVLASNAIFLGIVAFVPFTIGRIFLSVLNLGKAPARSEGPVEVV
AKAVAVYDAMAEVFVTAIQLSDAATVAVGYGVIFLLLSFYLGLILLVRYGRAEAAPSLFR
HIIGCVRYVATMLKVAFLLVIELGVFPLVCGWWLDVCTLAMLKVSFAQRVAFFWASPLTS
SLLHWLVGIFYMLQISIFVSLLREVLRPGVLYFLRDPADPNYNPFRDLIDDPLHKHARRV
LLSVVVYGSLIVLLVFVPVQVATHLAFSVFPLDIRVSDPFTELPADMLLFHICIPFALEH
FRPRATIKAVLFYWFSVVGKALDLYEYLLPRPEDTNRGNGNAVAEQAAPPPAANGETDAD
EERLDTGEYKFAVRIVLLLLGAWLTMLVFNSSLIVLPVSVGRAIVTSFSRLPITRAVRYI
VNYLRTHDMWVLFMQVLKWSAIVSKSVVLLSLWVIVIPVLIGLLFELLVVVPLRVPVDES
PVFLLYQDWALGLVLLKIWTRLAMAGQATLLTDESWRRKFEQVKADGFSRLRGWWVFQEI
VAPVLVKLLTALSIPYVAARGLFPALGLSILINSAVYRFAWAGSLMLLTGWYGLRQLRQL
FLDVHNAIRDDRYLIGKRLHNYGEPSKA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
gaggatgaggaggatgtctgccggatttgcaggacatcgggcgaggatggatcgccgctc
tactatccttgcgcttgcagcggcagcatcaagtacgtgcatcaagagtgcctgttgcag
tggctcaatcacagcaatgccaagcaatgcgaggtttgcaagcaccagttctctttctcc
ccggtctatgccgaggacgctccaacgcgcctcccagtgaccgagctcgtctatggcatg
gtcgccaaggccgggaggggcctgcgattcttctctaggctcgtgctcgtcttgtcggtg
tggctgctcttcatccctttcaccaccttctggatttggaggatgactttcgtgagaagc
ctcggtgatgcccagaagctcttcgtcacccgcttcctcacgccggccttcctcttcgcc
gactgcttgaatggcttcctcatctcggccgggatcgtctttatatttcttggagcaacg
tcgctgcgagagtactttagacacatccgggaggtggctggccaggaggctgataggcag
cagcacgctcctcccgcgaacggcgatggcggtgctgggcagggacagggactagccgct
ggagctggcgagatcatcaggaggaacgctgagaacgtcgcagcgcggatagaagctcac
gtggaacagatgtttgaagccgacgatccagatggtgctgaggatgttcctttcgacgag
ctcgttggaatgcagggaccgatccaccatttgatcgagaatgcggtcactgttctagca
agcaatgccattttcctgggaatagttgcgtttgttccgtttaccatcggccgtatcttt
ctctcggtattaaatcttggcaaagctcctgctcgctcagaaggaccagtggaggttgtg
gccaaggctgttgcggtttacgatgctatggccgaggtgttcgtaactgcgatccagctc
tccgacgcagcaaccgtcgcggtcggctatggagtcatctttcttctgctgagcttctat
ctcggcctgatacttctcgtccgctatggaagggccgaagctgccccttctttgttccga
catattatcggttgcgtgaggtatgtggcgacgatgctcaaggtggctttccttctggtc
atcgagctcggcgtctttcctttggtttgcggatggtggctcgacgtttgcaccttggct
atgctaaaggtgtcctttgcacagcgagttgcattcttctgggcctcaccccttaccagc
tctcttctgcattggctggtcggcatattttacatgctacagataagcatttttgtgagc
ttgttgcgtgaggttctccgccctggagtcctatatttcttgcgtgacccggcggatcca
aattacaatcctttccgcgacttgattgacgatccgcttcataagcacgctagaagagta
cttctctctgtggtcgtgtatggaagcttgattgttttactggtgtttgttccggttcaa
gtggccacgcatttagctttttccgtttttcctctggacataagagtatcggatccgttt
actgagctccctgccgacatgctcttgtttcatatatgcataccgttcgctctcgaacac
ttccgcccaagagcgaccatcaaggctgttctattctactggttttcagttgtgggcaag
gctctcgatctttacgagtacctccttcctcgtccagaagacacaaatagaggaaatgga
aatgccgttgctgaacaagccgcaccaccaccagctgctaatggcgaaaccgacgccgac
gaggaaagattagacactggagagtacaagttcgcggtgcgcattgttttgcttctgctc
ggggcgtggttgacgatgctggttttcaactcgtccttgattgtccttccggtctccgtt
gggcgtgccattgtcacctcgttctctcgccttccaatcacgagggcggtccgttacata
gtaaactatttgaggacgcatgacatgtgggttcttttcatgcaagttctcaagtggtca
gccattgtgtcgaagagcgtcgtgctcctctcgctatgggtgattgtcattcccgttctt
attggtttgctgtttgagcttctggtggtggtgccactgcgagtgcctgtggatgaaagc
cccgtcttcttgctgtatcaagactgggctctcggactcgtcctcttgaaaatctggact
cgactggcaatggcgggccaggcgacgctcctcacggacgagagctggaggcgaaagttc
gagcaagtgaaagccgatggattctcccggctccgggggtggtgggttttccaggagatt
gtagctccggtgctggtgaagctcctgacggctctcagcatcccatacgtcgctgctcgg
ggactgtttccagcgctgggcctctccatcctcatcaactcggcagtttatcggttcgcg
tgggccgggtcgctgatgctgctaactggctggtatgggctgaggcagctgaggcaattg
tttctcgacgtccacaacgcgatcagggatgacaggtatctcattggcaagaggctccac
aactatggcgagccttcgaaagcg
DBGET
integrated database retrieval system
