Selaginella moellendorffii: SELMODRAFT_50593
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Entry
SELMODRAFT_50593 CDS
T01496
Name
(RefSeq) hypothetical protein
KO
K14288
exportin-T
Organism
smo
Selaginella moellendorffii
Pathway
smo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SELMODRAFT_50593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smo03016
]
SELMODRAFT_50593
Transfer RNA biogenesis [BR:
smo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
SELMODRAFT_50593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
IBN_N
CAS_CSE1
UTP20
Motif
Other DBs
NCBI-GeneID:
9639220
NCBI-ProteinID:
XP_002977396
JGI:
50593
UniProt:
D8S245
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MDDFEKAIFFSFNPTVDANLKAQATAFVQQAKQSPTIIQACVEKLRYSQYAEVQFWCLQA
LEEIVKQRYSSLASQQRHLIRSSLLAAVCFYDRDASSAPAAPPFIRNKLAQVVVLLLCIE
YPSQWPGAFVELISFLSKGPMVVDMFCRILIALDEEVISLEFQRSPAELALATRIKDAMR
QQCIGQIAAAWYNLVAVYRSARPDLAALVLETMQRYVSWIDIGLVANESFIPLMLEILVS
PQENRGLRGAAADCLLAVVSKRMDSSAKLALLRQLRLGPVCARLTSAEDGEFGSKLSALL
TGFAAEILECGKERDTGDMLDEILPSVFYFMQHGDEDISSTTFLFLSNFVKSATGKQATH
LRHILELIRYRMRYSADMKDALDVFDREGEEEEERMDEYRKELLVLFRSVYRVAPEVTTS
FVKGVLVSILGSSGTPFEEVEAGFTLLYCLGEGVPESSLKADSGDLPEMLGAILTMTVPR
TSHRAVAIVFLETVIRYVKFVQHHEAYVPAVLGAFLDGRGIHHPNPNVSSKAGYLFSRLV
RTLRLQLLPYVDSILQSLQDTLCISAKKSSPEEKFYTFEAVGFLIGAEDLPRDKQEKYLS
AVLLPLYQLVESTLASKVSYADGNQAATVALLQQIVLAINHFSKGFGEQLLVNSRPELGN
TFKQSVDVVLRILLAYPRVDALRSKVISFLHRMVDILGSSVFPILPTAIRQLLLQSESKD
LVEFIQLLNQLINKFKSAMNTIIQEIFPSVVDRVFFLLPKGSIPENVVSNTEEMRELQEL
QKAFFNFLHAVTSNDLSSVLRFQTGGRLNEIILLLLDSSCGHKDILVRKICVQVLSRLAL
DWCGTSTVVEQVPGFHRFVIDRFAADCCIRSILQASFNLNDANTVSLLNEIASAQKTLYE
RCGEDFLIQMATKVLPAVRCPPNMAEEYCLHIQRSDPKVLKTFYRNFAEKLRFQYN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttcgagaaggcaatctttttcagcttcaatcccaccgtggacgccaatctc
aaggcgcaggcgacggcgttcgtccagcaggccaagcaatcgccgacgataatccaggcc
tgcgtcgagaagctccgctactcgcagtacgccgaggtccaattctggtgcctccaggcg
ctggaggagatcgtcaagcagcgctactcttccctcgcatcgcagcagcgccacctcatc
cgatcgtctctcctggcggcggtgtgcttctacgatcgcgacgccagcagcgctccagcg
gcgccgcccttcatccgcaacaagctggcccaggtggtggtgctcctcctctgcatcgag
tatccatcccagtggccgggggcgttcgtggagctcatctccttcctctccaagggaccg
atggtggtggacatgttttgccggatcctcatcgccctcgacgaggaagtgatcagcctc
gagttccagcgatcgccggcggagctggccctcgccacccggatcaaggacgcgatgcgg
cagcagtgcatcggccagatcgcggcggcgtggtacaatctggtggcggtgtacaggtcc
gctaggcccgacctcgcggctctggtgctcgagacgatgcaaaggtatgtttcctggatc
gacattggattggtggcgaacgagagctttatcccactcatgctggagatcctcgtctcg
ccgcaggagaaccgggggctccgtggtgccgccgcggattgcttgctggccgtggtgtcc
aagaggatggattcgtcggccaagcttgcgctcctgcgccagctccgtttgggaccagtt
tgcgcgaggttgacgagcgccgaggatggcgagtttgggagcaaacttagcgctcttctc
actgggtttgctgcggagattttggagtgtgggaaggagcgtgacacgggcgacatgcta
gacgagatccttccatcggttttctacttcatgcagcacggtgacgaggatatatcttcg
acgacgttcctgtttctcagcaactttgtcaagtcggccaccgggaagcaggctactcac
ttgaggcacatattggagctcattcggtacaggatgcggtacagtgccgacatgaaggat
gctctggatgtttttgaccgggagggggaggaggaggaggagaggatggacgagtaccgg
aaggagctcctcgttttgttccgtagcgtctaccgagttgctccggaggtgacaacttcg
ttcgtcaagggtgtgctagtttcgattctgggaagctccgggacgccgtttgaggaggtt
gaagccgggttcacgctgctgtattgcctcggggaaggcgttcctgagagtagtttgaag
gcggacagtggagacttgccggagatgctcggggcgattttgacaatgactgttccccgc
acgtcgcaccgggcagtggcgatcgtttttctggaaacagtcatcagatacgtaaagttt
gtacagcaccacgaggcgtacgttcctgctgttcttggggcgtttctggatggcagaggg
attcaccacccgaatcctaatgtcagctccaaagcaggttatttattttcgaggctggtg
agaactcttcggttgcagttgcttccttatgtcgacagcatcctacagagtttgcaagac
accttgtgcatttcggcaaaaaaatcatctccagaagagaaattttacactttcgaggct
gttggctttcttattggagcggaggatttaccgcgtgataaacaagaaaaatatctctcg
gccgttcttcttcccctctaccaactggttgagtctacattggcaagcaaggtctcctat
gccgatggtaatcaggctgccaccgtcgcacttctgcagcaaatcgtgctggctatcaat
cactttagcaaaggttttggagagcagctgcttgtgaatagtcgtccagaacttgggaac
acgttcaaacagtccgtggacgtcgtgttgagaattcttctcgcgtatcccagagttgat
gctctcagaagcaaggttatttcctttcttcaccggatggtagacattcttggtagttca
gtattccctattttgccaactgcgatacggcagctgctcttgcaaagcgagtccaaagat
ttggtggagttcatccagctgcttaaccaactcataaacaaattcaaatctgctatgaac
acaatcattcaggagatttttccttcagtcgtagatcgggtattttttcttcttccaaag
ggctctattccggagaatgttgtcagcaataccgaggagatgcgcgagcttcaagagcta
caaaaggcattttttaactttttgcatgcggttacgtcgaacgacctttcttcggtgctc
cgtttccaaaccggtggaaggctcaatgagatcatcctacttttgttagacagtagttgc
ggccacaaggacatacttgtgagaaagatttgcgtacaagtcttatctagattggcgttg
gactggtgcggtaccagcacagttgtggaacaggttcctggattccaccggttcgtgatt
gacaggtttgccgcagattgctgcatccgaagtattctgcaggcttcgttcaacctcaac
gatgccaatacggtgtccttgctcaatgagattgcatccgcgcagaagactttgtatgag
aggtgtggcgaagactttttgatacagatggcaaccaaagtcctcccggctgttcgctgt
ccgccgaacatggccgaggagtattgcttgcacattcagcgatcggatcccaaggtcttg
aaaacgttctacaggaactttgcggagaagctccgcttccaatacaac
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